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Sed0016852 (gene) of Chayote v1 genome

Gene IDSed0016852
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1593426..1594138
RNA-Seq ExpressionSed0016852
SyntenySed0016852
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044641.1 hypothetical protein E6C27_scaffold46G003960 [Cucumis melo var. makuwa]8.6e-0767.24Show/hide
Query:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
        +WKKL+SIVRLIFPS  NAKRLSST  N+DGMKKK  +P   RP DE   AAP+ GNY
Subjt:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
KGN53138.1 hypothetical protein Csa_014851 [Cucumis sativus]1.1e-0664.41Show/hide
Query:  MALNLWKKLMSIVRLIFPSNLNAKRLSSTPNVDGMKKKIPAGRRPGDE--LAAPQKGNY
        MA  +WKKL+SIVRLI PS  NAKRLSST ++DGMKKK     RP DE   AAP+ GNY
Subjt:  MALNLWKKLMSIVRLIFPSNLNAKRLSSTPNVDGMKKKIPAGRRPGDE--LAAPQKGNY
TYK16947.1 hypothetical protein E5676_scaffold130G00840 [Cucumis melo var. makuwa]4.3e-0665.52Show/hide
Query:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
        +WKKL+SIVRLIFPS  NAKRLSST  N+D MKKK  +P   RP DE   AAP+ GNY
Subjt:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
TrEMBL top hitse value%identityAlignment
A0A0A0KUB7 Uncharacterized protein5.4e-0764.41Show/hide
Query:  MALNLWKKLMSIVRLIFPSNLNAKRLSSTPNVDGMKKKIPAGRRPGDE--LAAPQKGNY
        MA  +WKKL+SIVRLI PS  NAKRLSST ++DGMKKK     RP DE   AAP+ GNY
Subjt:  MALNLWKKLMSIVRLIFPSNLNAKRLSSTPNVDGMKKKIPAGRRPGDE--LAAPQKGNY
A0A5A7TSV2 Uncharacterized protein4.2e-0767.24Show/hide
Query:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
        +WKKL+SIVRLIFPS  NAKRLSST  N+DGMKKK  +P   RP DE   AAP+ GNY
Subjt:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
A0A5D3CYY9 Uncharacterized protein2.1e-0665.52Show/hide
Query:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
        +WKKL+SIVRLIFPS  NAKRLSST  N+D MKKK  +P   RP DE   AAP+ GNY
Subjt:  LWKKLMSIVRLIFPSNLNAKRLSST-PNVDGMKKK--IPAGRRPGDE--LAAPQKGNY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAAATCTTTGGAAGAAACTCATGTCCATTGTTAGACTCATCTTTCCTTCCAATTTAAATGCAAAGAGGTTGAGTTCCACACCCAATGTTGATGGTATGAAGAA
AAAAATACCTGCTGGTCGACGACCTGGTGATGAACTTGCTGCTCCTCAAAAAGGGAATTATTAA
mRNA sequenceShow/hide mRNA sequence
AAACAATCTCTTTGTCAACCAAAGAAAATGGCTTTAAATCTTTGGAAGAAACTCATGTCCATTGTTAGACTCATCTTTCCTTCCAATTTAAATGCAAAGAGGTTGAGTTC
CACACCCAATGTTGATGGTATGAAGAAAAAAATACCTGCTGGTCGACGACCTGGTGATGAACTTGCTGCTCCTCAAAAAGGGAATTATTAATTTTAAGATTATAATTGCA
ATTATTTGTATTCAATTAGATTAGCAATGATATAATAAAATACTATGGCTTTTAATTTTCGTCCCCAATTATTGTTGTACTAAAAAATGATTATACCGAGGGTCAGTGGC
GCAGTAGGATTTATTGGTCCCTCTTCTCCCACCATG
Protein sequenceShow/hide protein sequence
MALNLWKKLMSIVRLIFPSNLNAKRLSSTPNVDGMKKKIPAGRRPGDELAAPQKGNY