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Sed0016895 (gene) of Chayote v1 genome

Gene IDSed0016895
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationLG01:21225544..21226416
RNA-Seq ExpressionSed0016895
SyntenySed0016895
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.3e-2870.59Show/hide
Query:  NQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        ++  ++++ YSAKEL++IFN+MDTNEDGGLGLFEIK+ALK+LDAE PVHLA+ ALC+ADRNRDGKLG +E++QFVKY+M++GYVV
Subjt:  NQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3377.66Show/hide
Query:  MSSYGRKNQPAAAQ--NCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        MSSYGRK++  AAQ  + YSAKEL+EIFN+MDTNEDGGLGLFEIK+ALK+LDAEFPVHLAFKALC +DRNRDGKLG DE+++F+KYLM++GYVV
Subjt:  MSSYGRKNQPAAAQ--NCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2772.5Show/hide
Query:  AQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        +++ YS KELKEIF++MDTNEDGGLGLFEIK+ALK+LDAEFP+HLA+KALC ADRN DGKLG +E+++FVKY++++GYVV
Subjt:  AQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3377.66Show/hide
Query:  MSSYGRKNQPAAAQ--NCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        MSSYGRK++  AAQ  + YSAKEL+EIFN+MDTNEDGGLGLFEIK+ALK+LDAEFPVHLAFKALC +DRNRDGKLG DE+++F+KYLM++GYVV
Subjt:  MSSYGRKNQPAAAQ--NCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]5.8e-2973.49Show/hide
Query:  PAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        P ++++ YSAKEL++IFN+MDTNEDGGLGLFEIK+ALK+LDAE PVHLA+ ALC ADRNRDGKLG +E++QFVKY+M++GYVV
Subjt:  PAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein2.8e-2973.49Show/hide
Query:  PAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        P ++++ YSAKEL++IFN+MDTNEDGGLGLFEIK+ALK+LDAE PVHLA+ ALC ADRNRDGKLG +E++QFVKY+M++GYVV
Subjt:  PAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

A0A5C7H618 Uncharacterized protein1.0e-0740.79Show/hide
Query:  YSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        Y+ K+L  IF R DT+ DG L   E+ DA   L + FP + A++AL  AD N+DG +  +E  Q VKY +  G+++
Subjt:  YSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

A0A5D3D9N2 Putative calcium-binding protein CML106.3e-2970.59Show/hide
Query:  NQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        ++  ++++ YSAKEL++IFN+MDTNEDGGLGLFEIK+ALK+LDAE PVHLA+ ALC+ADRNRDGKLG +E++QFVKY+M++GYVV
Subjt:  NQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

A0A7J0EK87 Uncharacterized protein6.1e-0840.23Show/hide
Query:  RKNQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        R++ P + Q   +  +LK IF + D N DG L   E++ A + L A FP   A++ LC AD N DG +  DE+N  VKY M  GY +
Subjt:  RKNQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

W9S022 Putative calcium-binding protein CML107.9e-0842.11Show/hide
Query:  YSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV
        Y  ++LK +  R DT+ DG L   E+K A K L A  P   A +ALC AD+NRDG +  +E+   V Y   +GYV+
Subjt:  YSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGTACGGCAGAAAAAACCAGCCCGCGGCGGCGCAGAACTGCTACTCGGCGAAGGAGCTGAAAGAGATCTTCAACCGGATGGACACGAACGAAGATGGAGGGCT
GGGATTGTTCGAGATCAAGGACGCTCTGAAGCGGCTCGACGCCGAATTTCCGGTTCATCTCGCTTTCAAGGCGCTCTGTTTCGCCGACCGGAACAGAGATGGAAAGCTTG
GATTGGACGAGGTCAACCAGTTTGTTAAATACTTGATGAATCAAGGTTACGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
CCGTAACTCGTCGCAAAGAACATTTCCAAAACTGGACGACACCAAAAAACTGAATCCGATTCCATATTTTCACCGACAGAGACCGAATAAAAACCCAATTGGAAACACAC
ACAAAAGATAACACCGAATCTGAAATTCCAATCCCTAGTTTTGCATATAAATCCCCCATCCTTCCGCTTCAAAATCCAATCCAATCCAATCACAAAGTTCAAAGTCGATT
ACAGAGCAATCATGTCATCGTACGGCAGAAAAAACCAGCCCGCGGCGGCGCAGAACTGCTACTCGGCGAAGGAGCTGAAAGAGATCTTCAACCGGATGGACACGAACGAA
GATGGAGGGCTGGGATTGTTCGAGATCAAGGACGCTCTGAAGCGGCTCGACGCCGAATTTCCGGTTCATCTCGCTTTCAAGGCGCTCTGTTTCGCCGACCGGAACAGAGA
TGGAAAGCTTGGATTGGACGAGGTCAACCAGTTTGTTAAATACTTGATGAATCAAGGTTACGTTGTCTGATTGTAACTTTCTTCGCCGATTACGGCGGCTCCGGCGGATG
CCTGCCCGTTGTTCGTCGTCGGTTTCTAAAAACTTATTGAATAAACGGCGGCGCCGTCTTATGTATGAAGGTTGATCAATTTATTGCAGATTTGTATTTGTAGTGTAACG
TACATATTGAATGTTTTTAATTTAATGTCAATATATGAGGTAGCTGAATGGTGTTAGTGTACTTCAAGATTTCGGATGTTGAGCCTCTCATGGTTGTATTCTAAAAGAAA
AACAGTTCTTTTTAATCTATAGTTGGCGATTAAAAATTTAGTTTCATTTTTTAGTTTAATTACCCATTTTTGTTACATTCAAATATAATCCATCAGCAAGCAA
Protein sequenceShow/hide protein sequence
MSSYGRKNQPAAAQNCYSAKELKEIFNRMDTNEDGGLGLFEIKDALKRLDAEFPVHLAFKALCFADRNRDGKLGLDEVNQFVKYLMNQGYVV