; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016901 (gene) of Chayote v1 genome

Gene IDSed0016901
OrganismSechium edule (Chayote v1)
DescriptionCadherin-4 like
Genome locationLG12:32367110..32370230
RNA-Seq ExpressionSed0016901
SyntenySed0016901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]6.8e-7481.22Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S GAD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D+E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

XP_022135304.1 uncharacterized protein LOC111007300 [Momordica charantia]1.4e-7480.66Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARIL+ SQS +CSK QSSPFRLSLLIPSSFA+ HRNRSTRSGK KF EIDLES S G D ++LAIRKLDDFVQKIIV+RSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCL+FFAKESISG+ RLAP+DTE ET+N+VELEI+VKAP STDNSNQ E+
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]1.2e-7381.22Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S GAD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D+E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

XP_022974211.1 uncharacterized protein LOC111472830 isoform X1 [Cucurbita maxima]1.5e-7381.22Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S GAD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

XP_023531265.1 uncharacterized protein LOC111793559 isoform X1 [Cucurbita pepo subsp. pepo]5.7e-7380.66Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S  AD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D+E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

TrEMBL top hitse value%identityAlignment
A0A6J1C135 uncharacterized protein LOC1110073006.6e-7580.66Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARIL+ SQS +CSK QSSPFRLSLLIPSSFA+ HRNRSTRSGK KF EIDLES S G D ++LAIRKLDDFVQKIIV+RSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCL+FFAKESISG+ RLAP+DTE ET+N+VELEI+VKAP STDNSNQ E+
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

A0A6J1E5F5 uncharacterized protein LOC1114301025.8e-7178.45Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILSQSQS I SK+QS+P +L LLIPSSF + HRNRSTRSGKAKF EIDLES S GAD EVLAIRKLDDFV++IIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPL+KE SPS  + RG PCLDFFAK SISGA RLAP+DTE + SN+VELEIEVK  T TDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X15.6e-7481.22Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S GAD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D+E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X17.3e-7481.22Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILS SQS I +KLQS+P +LSLLIPSSF + HRNRSTRSGK KF EIDLES S GAD EVLAIRKLDDFVQKIIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPLTKEESPS  + RG PCLDFFAKESISGA RL P+D E ETSN++ELEIEVK PTSTDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

A0A6J1JIU5 uncharacterized protein LOC1114848406.4e-7077.35Show/hide
Query:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR
        MARILSQSQS I SKLQS+P ++ LLIPSSF + HRNRSTRSGKAKF EIDLES S GAD EVLAIRKLDDFV++IIV+RSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSQSQS-ICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRR

Query:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED
        +KPRKV DLFDKL+EPL+KE SPS  + RG PCLDFFA+ SISGA RL P+DTE +TSN+VE EIEVK  T TDNSNQ ED
Subjt:  SKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein1.6e-1741.55Show/hide
Query:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R
        MAR  S+S S+ SK + +    SLL PSS  ++ R++S+   +   +EID  + S      +  I+KL+D V +I V+R+ PDW+PFVPG+S+WVPP   
Subjt:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R

Query:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKES
         S+   +A L  KL  PLT EES S     G P  D+F K S
Subjt:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKES

AT1G16840.3 unknown protein2.8e-1737.72Show/hide
Query:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R
        MAR  S+S S+ SK + +    SLL PSS  ++ R++S+   +   +EID  + S      +  I+KL+D V +I V+R+ PDW+PFVPG+S+WVPP   
Subjt:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R

Query:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIE
         S+   +A L  KL  PLT EES S     G P  D+F K       +   ++T++ET++  E   E
Subjt:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIE

AT1G16840.4 unknown protein2.8e-1737.72Show/hide
Query:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R
        MAR  S+S S+ SK + +    SLL PSS  ++ R++S+   +   +EID  + S      +  I+KL+D V +I V+R+ PDW+PFVPG+S+WVPP   
Subjt:  MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPP--R

Query:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIE
         S+   +A L  KL  PLT EES S     G P  D+F K       +   ++T++ET++  E   E
Subjt:  RSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIE

AT1G78890.1 unknown protein1.9e-2142.47Show/hide
Query:  MARILSQSQSICSKLQSSPFRL---SLLIPSSFAIAHRN-----RSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSS
        MAR LS S S+      S +R    SLL+PSS  I  R+     RS  +     +EID+ +  +        + KL+D V +I+V+RS PDW+PFVPG+S
Subjt:  MARILSQSQSICSKLQSSPFRL---SLLIPSSFAIAHRN-----RSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSS

Query:  FWVPPRRSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAK
        FWVPP RS+   +A L +KL  P++ EES S    RG PC D+F K
Subjt:  FWVPPRRSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAK

AT2G19180.1 unknown protein2.1e-2041.8Show/hide
Query:  EIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRRSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARL
        E++++S +   + E   ++KL++FV++IIV  STPDW+PF PGSSFWVPP +    K+A+L DK+  PLT+EES S     G PC  FF          +
Subjt:  EIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRRSKPRKVADLFDKLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARL

Query:  APIDTESETSNKVELEIEVKAP
         P D  S T  + E  +E+K P
Subjt:  APIDTESETSNKVELEIEVKAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGAATCTTATCCCAATCGCAATCTATCTGCTCGAAATTGCAATCATCGCCTTTCAGATTATCGCTGTTAATTCCCTCCTCCTTTGCAATCGCTCATCGGAACCG
CTCTACGCGTTCCGGCAAGGCCAAGTTCTTCGAAATTGACCTAGAATCGCCTTCGATCGGGGCTGATTTTGAGGTTCTTGCGATCAGGAAGCTGGACGATTTTGTTCAGA
AGATTATTGTTCAGCGATCGACTCCTGATTGGATTCCGTTTGTGCCTGGTTCGTCGTTTTGGGTTCCGCCTCGCCGTTCGAAGCCGCGGAAGGTGGCTGACTTGTTTGAT
AAATTGATTGAACCGCTCACTAAGGAGGAGTCTCCTTCCTTTGTTGACGGCCGTGGTCGGCCCTGCTTAGATTTTTTCGCTAAAGAGTCCATCTCTGGAGCAGCTCGATT
GGCTCCGATAGATACCGAGTCGGAAACCTCAAATAAGGTGGAGTTGGAGATTGAGGTGAAGGCGCCAACAAGTACCGATAACTCAAACCAGTGTGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAAATTTTCCATTTCCAGATTTCTCATCTTGGAATCCAAGTTCGTTCTCACACCAACCCGAAGAACTCCACCGCTCAAATCTCATCTTGGTTTCTTCGCATGGCCCGA
ATCTTATCCCAATCGCAATCTATCTGCTCGAAATTGCAATCATCGCCTTTCAGATTATCGCTGTTAATTCCCTCCTCCTTTGCAATCGCTCATCGGAACCGCTCTACGCG
TTCCGGCAAGGCCAAGTTCTTCGAAATTGACCTAGAATCGCCTTCGATCGGGGCTGATTTTGAGGTTCTTGCGATCAGGAAGCTGGACGATTTTGTTCAGAAGATTATTG
TTCAGCGATCGACTCCTGATTGGATTCCGTTTGTGCCTGGTTCGTCGTTTTGGGTTCCGCCTCGCCGTTCGAAGCCGCGGAAGGTGGCTGACTTGTTTGATAAATTGATT
GAACCGCTCACTAAGGAGGAGTCTCCTTCCTTTGTTGACGGCCGTGGTCGGCCCTGCTTAGATTTTTTCGCTAAAGAGTCCATCTCTGGAGCAGCTCGATTGGCTCCGAT
AGATACCGAGTCGGAAACCTCAAATAAGGTGGAGTTGGAGATTGAGGTGAAGGCGCCAACAAGTACCGATAACTCAAACCAGTGTGAGGATTGAGAGAGAATGAACCTCA
TACCTCATCCACCAATGCAATTGGGATCGATAGATAGTTTTCGAAGCTTCGAAAGAGCGAATAGAGTAGAAAGTGATGGTGACGAGAGGTCGGAGAGAAATGGGATGCCT
CTACAGATGGTTCCAGTTTGACTGCTGCTGAACTCACTTCCATTTGCTTCGTCTCGACTGCCCTGTCTATTTAAAGTCAAATCTGCACCCTCTCCCCAAACTAATGGTTA
TTTATGCTTCTTTATTTCTGGACTGGTTACTTTAGGATCTCCAAATTCACCAGGTTGTTATTTAAATGAAGTGAATTGCCAGGATCTTGTCCTCTCCTCCACCACTGTTC
CCATCAAATCTATGCTATGCGCAGCCACAATAAGAACTCTTCCCTATGTATGTGTAAAATAACTAAATTTATTGTTTTCCATTTCAACATGAAGATCAATTTCAGTTCTT
AGTTGCAATATTTTGCAAATTGATTGATTCTTTTGTGCTCAGTATGCTAAGCTTTACTTTACTGGCTGTGTTGCTACAACATTTTTTATTTGCTTCTTTTGTACTGTTCT
ATGAAGGAGGGATGTCTGATCTTTTATTTTTATTTTTTTGAGTTACAACAATCGGGGATGGAGAGATTCAAACCCGT
Protein sequenceShow/hide protein sequence
MARILSQSQSICSKLQSSPFRLSLLIPSSFAIAHRNRSTRSGKAKFFEIDLESPSIGADFEVLAIRKLDDFVQKIIVQRSTPDWIPFVPGSSFWVPPRRSKPRKVADLFD
KLIEPLTKEESPSFVDGRGRPCLDFFAKESISGAARLAPIDTESETSNKVELEIEVKAPTSTDNSNQCED