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Sed0016905 (gene) of Chayote v1 genome

Gene IDSed0016905
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG01:23852429..23853217
RNA-Seq ExpressionSed0016905
SyntenySed0016905
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH88312.1 zinc CCHC-type-like protein [Trifolium medium]8.1e-1035.87Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +++ + ++ +++ S ++   GEFW R++D+P    + + A+KLG+I+G F+  D + D    GKFLR+K +ID+R+PL+R   +K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

MCI00644.1 zinc CCHC-type-like protein [Trifolium medium]1.1e-0935.87Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +++ + ++ D++ S ++    EFW R++D+P    +   A+KLG++LG F+  D +   R  GKFLR+K  ID+R+PL+R   +K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

PNY16581.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]1.2e-1039.13Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +++ + ++ D++ S I+   GEFW R++D+P    +   ARKLG++LGKF+  D +   R  GKFL +K  ID+R PL+R   +K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

TXG61207.1 hypothetical protein EZV62_012570 [Acer yangbiense]3.6e-1040.22Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +I+ E       +S++ F   EFWV++HD+P  C  R  A+ L   +GKFI    E  +   GKFLR+K+ ID+ +PL+R L+LK
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

TXG64469.1 hypothetical protein EZV62_011463 [Acer yangbiense]6.2e-1034.04Show/hide
Query:  MASPWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKL
        +  PW +DD +++F       R+  IQF   EFWV++H VP  C T+     LG+++ + +  D        GKFLR ++ +D+ +PLRR L++
Subjt:  MASPWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKL

TrEMBL top hitse value%identityAlignment
A0A2K3PMS8 Cysteine desulfurase mitochondrial-like6.0e-1139.13Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +++ + ++ D++ S I+   GEFW R++D+P    +   ARKLG++LGKF+  D +   R  GKFL +K  ID+R PL+R   +K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

A0A392MLA7 Zinc CCHC-type-like protein (Fragment)3.9e-1035.87Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +++ + ++ +++ S ++   GEFW R++D+P    + + A+KLG+I+G F+  D + D    GKFLR+K +ID+R+PL+R   +K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

A0A5C7HVP8 Uncharacterized protein1.8e-1040.22Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK
        PW +D  +I+ E       +S++ F   EFWV++HD+P  C  R  A+ L   +GKFI    E  +   GKFLR+K+ ID+ +PL+R L+LK
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLK

A0A5C7I6N8 Uncharacterized protein3.0e-1034.04Show/hide
Query:  MASPWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKL
        +  PW +DD +++F       R+  IQF   EFWV++H VP  C T+     LG+++ + +  D        GKFLR ++ +D+ +PLRR L++
Subjt:  MASPWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKL

A0A803LK12 Uncharacterized protein1.3e-1033.33Show/hide
Query:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLKSGAMVAEK
        PW +D  ++L +AM  D++ S++ F    FWVR+ DV         AR++G+ +G F+ +D E D     +F+R+K+ +D+ +PLRR +K+ +G  ++ K
Subjt:  PWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLKSGAMVAEK

Query:  WQDHRVDLLGE
        W   + + LG+
Subjt:  WQDHRVDLLGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCCCGTGGATCTACGACGATGTCGTGATATTGTTCGAAGCGATGGCAAGGGACAAACGGGTTTCTAAGATACAGTTCGGATTTGGAGAGTTTTGGGTTAGACT
ACACGATGTTCCTCCAGCGTGCCATACGAGAAATAATGCAAGGAAGTTAGGCAATATTTTGGGAAAATTTATAGGTTGGGATTATGAAGGAGATAAAAGGAATAAGGGAA
AATTTTTAAGAATGAAAATTGCAATCGATGTTCGTAGGCCATTGAGAAGGGCGCTGAAGTTGAAAAGTGGAGCAATGGTGGCTGAGAAATGGCAAGATCACCGAGTCGAT
TTGTTGGGAGAGGAAGGGGTCGTGAAAGAGGAAGAGGGGAGGTCTCACGTGGCGAAGAAGGTGATTTTTTTAGAGAGAGGAGGTGAGTCGGTTCCGATGGAAAGACGAAG
AAGAGAGGAAGAATGGGGACTGGCGAATTTTCCAGTGGAGGGGCGACGTATTTTTGCTGGCAACGGTTCGCCGAAAAAGGCGAGGGAAAGAGGGAAGAAAGTCAGAAGCT
GCATGAGGTTTCGTATGGCACAGATAAATTTTTGTGTACGAAGGTTGGAGATGAAGGTATTGGTTGCTCGATTAAGAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCCCGTGGATCTACGACGATGTCGTGATATTGTTCGAAGCGATGGCAAGGGACAAACGGGTTTCTAAGATACAGTTCGGATTTGGAGAGTTTTGGGTTAGACT
ACACGATGTTCCTCCAGCGTGCCATACGAGAAATAATGCAAGGAAGTTAGGCAATATTTTGGGAAAATTTATAGGTTGGGATTATGAAGGAGATAAAAGGAATAAGGGAA
AATTTTTAAGAATGAAAATTGCAATCGATGTTCGTAGGCCATTGAGAAGGGCGCTGAAGTTGAAAAGTGGAGCAATGGTGGCTGAGAAATGGCAAGATCACCGAGTCGAT
TTGTTGGGAGAGGAAGGGGTCGTGAAAGAGGAAGAGGGGAGGTCTCACGTGGCGAAGAAGGTGATTTTTTTAGAGAGAGGAGGTGAGTCGGTTCCGATGGAAAGACGAAG
AAGAGAGGAAGAATGGGGACTGGCGAATTTTCCAGTGGAGGGGCGACGTATTTTTGCTGGCAACGGTTCGCCGAAAAAGGCGAGGGAAAGAGGGAAGAAAGTCAGAAGCT
GCATGAGGTTTCGTATGGCACAGATAAATTTTTGTGTACGAAGGTTGGAGATGAAGGTATTGGTTGCTCGATTAAGAATGTGA
Protein sequenceShow/hide protein sequence
MASPWIYDDVVILFEAMARDKRVSKIQFGFGEFWVRLHDVPPACHTRNNARKLGNILGKFIGWDYEGDKRNKGKFLRMKIAIDVRRPLRRALKLKSGAMVAEKWQDHRVD
LLGEEGVVKEEEGRSHVAKKVIFLERGGESVPMERRRREEEWGLANFPVEGRRIFAGNGSPKKARERGKKVRSCMRFRMAQINFCVRRLEMKVLVARLRM