CuGenDBv2

Gene ID	Sed0016912
Organism	Sechium edule (Chayote v1)
Description	protein EMB-1-like
Genome location	LG14:6289495..6290573
RNA-Seq Expression	Sed0016912
Synteny	Sed0016912
Gene Ontology terms	GO:0009737 - response to abscisic acid (biological process) GO:0048700 - acquisition of desiccation tolerance in seed (biological process)
InterPro domains	IPR000389 - Small hydrophilic plant seed protein IPR022377 - Small hydrophilic plant seed protein, conserved site IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033764.1 Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSNSG+ GGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

XP_004148611.1 protein EMB-1 [Cucumis sativus]

9.1e-28

90.91

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

XP_008464209.1 PREDICTED: protein EMB-1-like [Cucumis melo]

2.4e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

XP_022144068.1 protein EMB-1-like [Momordica charantia]

5.4e-28

92.21

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQ+MGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

XP_022949998.1 protein EMB-1 [Cucurbita moschata]

5.4e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSNSG+ GGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CKY4 protein EMB-1-like

1.2e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

A0A5D3E041 Protein EMB-1-like

1.2e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

A0A6J1CSC5 protein EMB-1-like

2.6e-28

92.21

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQ+MGRKGGLSN+G+SGGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

A0A6J1GDN9 protein EMB-1

2.6e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSNSG+ GGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

A0A6J1ISS4 protein EMB-1

2.6e-28

93.51

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        MSS+QER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSR GQTRKEQLGHEGYQEMGRKGGLSNSG+ GGERAA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

SwissProt top hits

e value

%identity

Alignment

P17639 Protein EMB-1

2.1e-27

84.21

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERA
        M+S+QE++ELDARARQGETVVPGGTGGKSLEAQ+HLAEGRS+ GQTRKEQLG EGY EMGRKGGLSN+ +SGGERA
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERA

P42755 Em protein H5

2.9e-24

80.26

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Query:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        S +QER ELD  AR+GETVVPGGTGGKSLEAQEHLA+GRSR G+TRKEQLG EGY+EMGRKGGLS    SGGERAA
Subjt:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

P46517 Late embryogenesis abundant protein EMB564

1.4e-23

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Query:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        S ++ R+ELD +AR+GETVVPGGTGGKS+EAQEHLAEGRSR GQTR+EQLG +GY EMG+KGGLS +  SGGERAA
Subjt:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

Q05190 Late embryogenesis abundant protein B19.1A

1.4e-23

76.32

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Query:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        S +QER +LD +AR+GETVVPGGTGGKSLEAQ++LAEGRSR GQTR+EQ+G EGY EMGRKGGLS++  SGGERAA
Subjt:  SSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

Q40864 Em-like protein

2.0e-25

79.22

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA
        M  +Q+RRELDA+AR+GETVVPGGTGGKSL+AQE LAEGRSR GQTRKEQ+G EGYQEMGRKGGLS++G  GGERA+
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40170.1 Stress induced protein

1.7e-24

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Query:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERA
        M+S+QE+++LD RA++GETVVPGGTGGKS EAQ+HLAEGRSR GQTRKEQLG EGYQ+MGRKGGLS     GGE A
Subjt:  MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERA

AT3G51810.1 Stress induced protein

1.8e-21

81.54

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Query:  MSSKQ-ERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGG
        M+SKQ  R ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+ GQTRKEQLGHEGYQE+G KGG
Subjt:  MSSKQ-ERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGG

Sequences

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CDS sequence

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ATGTCGTCGAAGCAGGAAAGGCGTGAACTCGACGCCAGGGCTAGGCAAGGGGAGACTGTTGTCCCCGGTGGAACCGGGGGCAAGAGTCTCGAAGCTCAAGAGCACCTCGC
CGAAGGGCGGAGCCGCAGGGGACAGACGAGGAAGGAGCAGCTGGGACACGAAGGGTACCAAGAGATGGGCCGCAAAGGAGGGCTCAGCAACTCGGGTATCTCAGGAGGAG
AGCGTGCTGCTTAG

mRNA sequence

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Protein sequence

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MSSKQERRELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRRGQTRKEQLGHEGYQEMGRKGGLSNSGISGGERAA

Sed0016912 (gene) of Chayote v1 genome