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Sed0016933 (gene) of Chayote v1 genome

Gene IDSed0016933
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG12:6044861..6045907
RNA-Seq ExpressionSed0016933
SyntenySed0016933
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE6196043.1 unnamed protein product [Arabidopsis arenosa]9.4e-2349.12Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR         F    L AFA    F ++   P   RW+G    +D     +       GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CGS+LF P
Subjt:  EAWRCRCGSRLFNP

KAG6597420.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2761.82Show/hide
Query:  GSFRHSLIISSNHFPF----TLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWR
        GS RH     SNH  F    TLLLAF AA FFH  FA   T+RW  G        T +GPGSSPP CR RCGRCWPC+PVHVPIQPG+ +PLEYYPEAWR
Subjt:  GSFRHSLIISSNHFPF----TLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWR

Query:  CRCGSRLFNP
        C+CG++LF P
Subjt:  CRCGSRLFNP

KAG7542910.1 hypothetical protein ISN45_Aa07g028520 [Arabidopsis thaliana x Arabidopsis arenosa]1.5e-2350Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAAD-------GKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR        HF    L AFA    F ++   P   RW+G    +D             GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAAD-------GKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CGS+LF P
Subjt:  EAWRCRCGSRLFNP

XP_002870291.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Arabidopsis lyrata subsp. lyrata]1.1e-2350Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR        HF    L AFA    F ++F      RW+G    +D     +       GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CGS+LF P
Subjt:  EAWRCRCGSRLFNP

XP_038905188.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]5.5e-2355.32Show/hide
Query:  HFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        HF   L+L    A F     A+P +  W+G       + +L+GPGS PP CR +CGRC PCEPVHVPIQPGL +PLEYYPEAWRC+CG++LF P
Subjt:  HFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

TrEMBL top hitse value%identityAlignment
A0A0A0L4P0 Epidermal patterning factor-like protein1.3e-2253.7Show/hide
Query:  SFRHSLIISSNHFPFTLLLAFA---AAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCR
        SF  S   S  HF   +L  FA   A+A   S+ ++  T  W+G       + +L+GPGSSPP C  +CGRC PCEPVHVPIQPGL LPLEYYPEAWRC+
Subjt:  SFRHSLIISSNHFPFTLLLAFA---AAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCR

Query:  CGSRLFNP
        CG++LF P
Subjt:  CGSRLFNP

A0A178V213 Epidermal patterning factor-like protein1.9e-2146.49Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAAD-------GKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR         F    L+ FA    F ++       RW+G    +D             GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAAD-------GKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CG++LF P
Subjt:  EAWRCRCGSRLFNP

A0A1S3AWH2 Epidermal patterning factor-like protein5.0e-2253.33Show/hide
Query:  FRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPG-TERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGS
        F  SL+I +  F F L  A ++++   S+F++   T  W+G       + +L+GPGSSPP C  +CGRC PCEPVHVPIQPGL LPLEYYPEAWRC+CG+
Subjt:  FRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPG-TERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGS

Query:  RLFNP
        +LF P
Subjt:  RLFNP

A0A6D2KFV2 Epidermal patterning factor-like protein2.5e-2154.17Show/hide
Query:  LLLAFAAAAFFH--SAFATPGTERWVGGAAAADGKSTLI-----GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        LL + AA AF H  SA +   T  W+G    +D     +     GPGSSPP CR +CG+C PC+PVHVPIQPG+ +PLEYYPEAWRC+CG++LF P
Subjt:  LLLAFAAAAFFH--SAFATPGTERWVGGAAAADGKSTLI-----GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

D7MGX0 Epidermal patterning factor-like protein5.4e-2450Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR        HF    L AFA    F ++F      RW+G    +D     +       GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CGS+LF P
Subjt:  EAWRCRCGSRLFNP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.6e-1758.33Show/hide
Query:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        A+ +  L G GSSPP C  +CGRC PC+PVHVP+ PG  +  EYYPEAWRC+CG++L+ P
Subjt:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 43.0e-2447.37Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR         F    L+ FA    F ++       RW+G    +D     I       GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CG++LF P
Subjt:  EAWRCRCGSRLFNP

Q7M1E7 Polygalacturonase1.6e-0941.94Show/hide
Query:  AAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        A A G ST I   SSPP C+ +C  C PC+P  + + P    P +YYP+ W C C ++++NP
Subjt:  AAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

Q9FY19 Polygalacturonase3.4e-0740.82Show/hide
Query:  SSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        SSPP C+ +C  C PC+P  + + P    P +YYP+ W C C ++++NP
Subjt:  SSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.2e-2175Show/hide
Query:  GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        GPGS PP CR +CG+C PC+ VHVPIQPGLI+PLEYYPEAWRC+CG++LF P
Subjt:  GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein4.2e-0531.82Show/hide
Query:  FAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLE---YYPEAWRCRCGSRLFNP
        F AA F  + F +  +   + GA     +      GS PP C  +C  C PC P    I+       +   YYP  W CRC  R+F P
Subjt:  FAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLE---YYPEAWRCRCGSRLFNP

AT2G30370.1 allergen-related1.1e-1858.33Show/hide
Query:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        A+ +  L G GSSPP C  +CGRC PC+PVHVP+ PG  +  EYYPEAWRC+CG++L+ P
Subjt:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

AT2G30370.2 allergen-related1.1e-1858.33Show/hide
Query:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        A+ +  L G GSSPP C  +CGRC PC+PVHVP+ PG  +  EYYPEAWRC+CG++L+ P
Subjt:  ADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

AT3G22820.1 allergen-related2.2e-2275Show/hide
Query:  GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP
        GPGS PP CR +CG+C PC+ VHVPIQPGLI+PLEYYPEAWRC+CG++LF P
Subjt:  GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)2.2e-2547.37Show/hide
Query:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP
        MG+FR         F    L+ FA    F ++       RW+G    +D     I       GPGSSPP CR +CG+C PC+PVHVPIQPGL +PLEYYP
Subjt:  MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLI-------GPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYP

Query:  EAWRCRCGSRLFNP
        EAWRC+CG++LF P
Subjt:  EAWRCRCGSRLFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCATTCCGCCATTCCCTTATAATTTCCTCCAATCATTTCCCTTTCACTCTCCTCCTCGCCTTCGCCGCCGCCGCCTTCTTCCACTCCGCGTTTGCAACCCCAGG
AACCGAGCGGTGGGTTGGGGGAGCGGCGGCGGCGGATGGGAAGAGTACTTTGATTGGGCCGGGATCTTCGCCGCCGGCGTGTCGGTTCAGGTGTGGGAGATGCTGGCCGT
GTGAACCGGTTCATGTCCCCATTCAACCGGGTCTGATTCTTCCATTGGAGTATTATCCTGAAGCTTGGAGATGTAGATGTGGGAGTAGGCTCTTCAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
CCAAAATCCCCTAATTTCTGAATGGGATCATTCCGCCATTCCCTTATAATTTCCTCCAATCATTTCCCTTTCACTCTCCTCCTCGCCTTCGCCGCCGCCGCCTTCTTCCA
CTCCGCGTTTGCAACCCCAGGAACCGAGCGGTGGGTTGGGGGAGCGGCGGCGGCGGATGGGAAGAGTACTTTGATTGGGCCGGGATCTTCGCCGCCGGCGTGTCGGTTCA
GGTGTGGGAGATGCTGGCCGTGTGAACCGGTTCATGTCCCCATTCAACCGGGTCTGATTCTTCCATTGGAGTATTATCCTGAAGCTTGGAGATGTAGATGTGGGAGTAGG
CTCTTCAATCCTTAAGGCTTATAATTCAACCAAATTAGTAATTTTCTTTTTTGGCATTATTTTTTACTCTCTAAATATATGTTATTTGTGTGTGTATATTGATCTGCTTA
ATTAAACTGGGCAAGGAATTTGAAGAGAATTAGTTGAG
Protein sequenceShow/hide protein sequence
MGSFRHSLIISSNHFPFTLLLAFAAAAFFHSAFATPGTERWVGGAAAADGKSTLIGPGSSPPACRFRCGRCWPCEPVHVPIQPGLILPLEYYPEAWRCRCGSRLFNP