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Sed0016937 (gene) of Chayote v1 genome

Gene IDSed0016937
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive family protein
Genome locationLG06:46398871..46399696
RNA-Seq ExpressionSed0016937
SyntenySed0016937
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581780.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3877.5Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLSR++T +AV +A+   ++ LH VFVG SRRRYLLSSDVVQHPLFQE+VDKSS N+   +EG+VVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        LEN A  QLGSADEL QFYT
Subjt:  LENAAAAQLGSADELAQFYT

XP_011651720.1 auxin-responsive protein SAUR78 [Cucumis sativus]5.0e-3874.22Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVV
        MAKLGKLTKLKSAIKRWPSISKLSR++TP   +AV +A+        N+ LH VFVG SRRRYLLSSDVV HPLFQELVDKSS N+   ++GLV+SCEVV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVV

Query:  LFEHLLWMLENAAAAQLGSADELAQFYT
        LFEHLLWMLEN AA QLGSADEL QFYT
Subjt:  LFEHLLWMLENAAAAQLGSADELAQFYT

XP_022955880.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.0e-3878.33Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLSR++T +AV SA+   ++ LH VFVG SRRRYLLSSDVVQHPLFQE+VDKSS N+   +EG+VVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        LEN A  QLGSADEL QFYT
Subjt:  LENAAAAQLGSADELAQFYT

XP_022980757.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]6.6e-3876.67Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLSR++T +AV SA+   ++ LH VFVG SRRRYLLSSDVVQHPLFQE+V+KSS N+   ++G+VVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        LEN A  QLGSADEL QFYT
Subjt:  LENAAAAQLGSADELAQFYT

XP_038901184.1 auxin-responsive protein SAUR78-like [Benincasa hispida]1.7e-3876.38Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS-------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVL
        MAKLG+LTKLKSAIKRWPSISKLSR+ TP   +AV SA+       N+ LH VFVG SRRRYLLSSDVV HPLFQELVDKSS N+   D+GLVVSCEVVL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS-------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVL

Query:  FEHLLWMLENAAAAQLGSADELAQFYT
        FEHLLWMLEN AA QLGSADEL QFYT
Subjt:  FEHLLWMLENAAAAQLGSADELAQFYT

TrEMBL top hitse value%identityAlignment
A0A0A0LBZ7 Uncharacterized protein2.4e-3874.22Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVV
        MAKLGKLTKLKSAIKRWPSISKLSR++TP   +AV +A+        N+ LH VFVG SRRRYLLSSDVV HPLFQELVDKSS N+   ++GLV+SCEVV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTP---AAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVV

Query:  LFEHLLWMLENAAAAQLGSADELAQFYT
        LFEHLLWMLEN AA QLGSADEL QFYT
Subjt:  LFEHLLWMLENAAAAQLGSADELAQFYT

A0A1S4E2S4 auxin-responsive protein SAUR71-like1.6e-3775.19Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSR----SSTPAAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEV
        MAKLGKLTKLKSAIKRWPSISKLSR    SS+ +AV SA+        N+ LH VFVG SRRRYLLSSDVV HPLFQELVDKSS  NS  ++GLVVSCEV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSR----SSTPAAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEV

Query:  VLFEHLLWMLENAAAAQLGSADELAQFYT
        VLFEHLLWMLEN A  QLGSADEL QFYT
Subjt:  VLFEHLLWMLENAAAAQLGSADELAQFYT

A0A5D3D6I8 Auxin-responsive protein SAUR71-like1.6e-3775.19Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSR----SSTPAAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEV
        MAKLGKLTKLKSAIKRWPSISKLSR    SS+ +AV SA+        N+ LH VFVG SRRRYLLSSDVV HPLFQELVDKSS  NS  ++GLVVSCEV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSR----SSTPAAVDSAS--------NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEV

Query:  VLFEHLLWMLENAAAAQLGSADELAQFYT
        VLFEHLLWMLEN A  QLGSADEL QFYT
Subjt:  VLFEHLLWMLENAAAAQLGSADELAQFYT

A0A6J1GWA8 auxin-responsive protein SAUR50-like4.9e-3978.33Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLSR++T +AV SA+   ++ LH VFVG SRRRYLLSSDVVQHPLFQE+VDKSS N+   +EG+VVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        LEN A  QLGSADEL QFYT
Subjt:  LENAAAAQLGSADELAQFYT

A0A6J1IS54 auxin-responsive protein SAUR50-like3.2e-3876.67Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLSR++T +AV SA+   ++ LH VFVG SRRRYLLSSDVVQHPLFQE+V+KSS N+   ++G+VVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSAS---NNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        LEN A  QLGSADEL QFYT
Subjt:  LENAAAAQLGSADELAQFYT

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR766.6e-1747.24Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSIS-------KLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLV-VSCEVVLF
        MAK G KL KLKS +K+  S +         +  S  +AV +  +  L  V+VG +RR Y +SSDVV HPLFQ+L   + D   G+++G + VSCEVVLF
Subjt:  MAKLG-KLTKLKSAIKRWPSIS-------KLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLV-VSCEVVLF

Query:  EHLLWMLENAAA--AQLGSADELAQFY
        EHLLWMLENA A  ++  S  EL +FY
Subjt:  EHLLWMLENAAA--AQLGSADELAQFY

Q9C9E1 Auxin-responsive protein SAUR783.4e-2955.83Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDS---ASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAK+GKLTKLKSA+K+WPS +K    ST +A  S   + +N LH V+VG +RR Y+L  D++ HPLFQELVD+SS  +   D  +VV+CEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDS---ASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        L++      GS +ELA+FYT
Subjt:  LENAAAAQLGSADELAQFYT

Q9LQI6 Auxin-responsive protein SAUR773.0e-2551.54Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASN----NALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSD--NNSGTDEGLVVSCEVVLFEHL
        MA  GKLTKLKSAIK+WPS++K   S+   A  + S       LH V+VG SRR Y+LSS V+ HPLFQEL+D+SS         E ++V+CEVVLFEHL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASN----NALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSD--NNSGTDEGLVVSCEVVLFEHL

Query:  LWMLENAAA-------AQLGSADELAQFYT
        LWML+N+++        + GS +ELA+FYT
Subjt:  LWMLENAAA-------AQLGSADELAQFYT

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family2.1e-2651.54Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASN----NALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSD--NNSGTDEGLVVSCEVVLFEHL
        MA  GKLTKLKSAIK+WPS++K   S+   A  + S       LH V+VG SRR Y+LSS V+ HPLFQEL+D+SS         E ++V+CEVVLFEHL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASN----NALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSD--NNSGTDEGLVVSCEVVLFEHL

Query:  LWMLENAAA-------AQLGSADELAQFYT
        LWML+N+++        + GS +ELA+FYT
Subjt:  LWMLENAAA-------AQLGSADELAQFYT

AT1G72430.1 SAUR-like auxin-responsive protein family2.4e-3055.83Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDS---ASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM
        MAK+GKLTKLKSA+K+WPS +K    ST +A  S   + +N LH V+VG +RR Y+L  D++ HPLFQELVD+SS  +   D  +VV+CEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDS---ASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLVVSCEVVLFEHLLWM

Query:  LENAAAAQLGSADELAQFYT
        L++      GS +ELA+FYT
Subjt:  LENAAAAQLGSADELAQFYT

AT3G12955.1 SAUR-like auxin-responsive protein family1.8e-0933.07Show/hide
Query:  NTEMAKLGKLTKLKS-AIKRWPS--ISKLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDK----SSDNNSGTDEGLVVSCEVVL
        +T++ +    T L+S + +R P   +  + +S TP+   +        V VG +++ YL+S   ++HPL   LV+K      D+N      + V CEVVL
Subjt:  NTEMAKLGKLTKLKS-AIKRWPS--ISKLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDK----SSDNNSGTDEGLVVSCEVVL

Query:  FEHLLWMLENAAAAQ-LGSADELAQFY
        F+HLLWMLE       L S D+ A  Y
Subjt:  FEHLLWMLENAAAAQ-LGSADELAQFY

AT4G34750.1 SAUR-like auxin-responsive protein family1.0e-0424.47Show/hide
Query:  KLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEG-LVVSCEVVLFEHLL
        K+G + +++  +K+W   + +  S+     D    +    V VG +RRRY++ +  + HP+F+ L+ ++ +     + G L + C+  LFE ++
Subjt:  KLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEG-LVVSCEVVLFEHLL

AT5G20820.1 SAUR-like auxin-responsive protein family4.7e-1847.24Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSIS-------KLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLV-VSCEVVLF
        MAK G KL KLKS +K+  S +         +  S  +AV +  +  L  V+VG +RR Y +SSDVV HPLFQ+L   + D   G+++G + VSCEVVLF
Subjt:  MAKLG-KLTKLKSAIKRWPSIS-------KLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNSGTDEGLV-VSCEVVLF

Query:  EHLLWMLENAAA--AQLGSADELAQFY
        EHLLWMLENA A  ++  S  EL +FY
Subjt:  EHLLWMLENAAA--AQLGSADELAQFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGGTGTGGATTCATTTTGGTTCCCTTTTGTCCCTTTCCTTCACCCCTTCCCTTTTTATATTTCATTCCATTTCTATTTGTGTTCTCAAACACGGAAATGGCGAA
GCTGGGCAAGCTCACCAAGCTCAAATCCGCCATCAAACGCTGGCCTTCCATCTCGAAGCTGTCCCGCAGCAGCACCCCCGCCGCCGTGGACAGCGCCTCTAACAATGCCC
TCCACCACGTGTTCGTGGGAATGTCCCGGCGGCGGTACCTGCTGTCGTCGGACGTGGTCCAGCACCCGCTGTTCCAGGAGCTGGTCGACAAGTCGTCCGACAATAATTCG
GGGACCGACGAGGGTCTGGTTGTGTCGTGCGAAGTTGTTCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCTGCCGCCGCTCAATTGGGGTCCGCCGATGAGCTCGC
CCAATTCTACACTTAA
mRNA sequenceShow/hide mRNA sequence
AAAACCCGAACTAACAATAAACTTCTTCCCCTTTCTTTCTTTCGTTTACATTAAACTTTCATTTTAATTTTTAATTGCATTCAAAATAGTTTGGATTCATTTAATTATTT
CAATGATAAAAAATTGAAATTTTTGTGAATGATTATTATTATTATTATCTCATGCTTAGGTGTGGATTCATTTTGGTTCCCTTTTGTCCCTTTCCTTCACCCCTTCCCTT
TTTATATTTCATTCCATTTCTATTTGTGTTCTCAAACACGGAAATGGCGAAGCTGGGCAAGCTCACCAAGCTCAAATCCGCCATCAAACGCTGGCCTTCCATCTCGAAGC
TGTCCCGCAGCAGCACCCCCGCCGCCGTGGACAGCGCCTCTAACAATGCCCTCCACCACGTGTTCGTGGGAATGTCCCGGCGGCGGTACCTGCTGTCGTCGGACGTGGTC
CAGCACCCGCTGTTCCAGGAGCTGGTCGACAAGTCGTCCGACAATAATTCGGGGACCGACGAGGGTCTGGTTGTGTCGTGCGAAGTTGTTCTGTTCGAGCACTTGCTGTG
GATGCTGGAAAATGCTGCCGCCGCTCAATTGGGGTCCGCCGATGAGCTCGCCCAATTCTACACTTAACCCCCAGTTTGGAAAACTCTTTTTTTTTTTTGAAAATTTGTTG
AAAAGTTTGTGCGTGTGTTTATTTGATGTCCACAGAATGAAGAAATTAAGGTGTAGGATAGAGGCTAATGCCAAATATTATACGTATCTGATTTCCGGACCAACCTCTAC
ACTTTTCTCCTCCACCAAACTACTCATTAATTATCTCTATATGCGTGTTTTTGTTT
Protein sequenceShow/hide protein sequence
MLRCGFILVPFCPFPSPLPFLYFIPFLFVFSNTEMAKLGKLTKLKSAIKRWPSISKLSRSSTPAAVDSASNNALHHVFVGMSRRRYLLSSDVVQHPLFQELVDKSSDNNS
GTDEGLVVSCEVVLFEHLLWMLENAAAAQLGSADELAQFYT