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Sed0016952 (gene) of Chayote v1 genome

Gene IDSed0016952
OrganismSechium edule (Chayote v1)
DescriptionNAD(P)H dehydrogenase subunit 5
Genome locationContig00347:105705..106614
RNA-Seq ExpressionSed0016952
SyntenySed0016952
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5511226.1 hypothetical protein DKX38_030151 [Salix brachista]5.3e-1260.53Show/hide
Query:  SSILSLWIEEKGARQEEDCNMREAR-SWTLMSIQMNHPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSG
        S ILSLW EEK A  +    +   + SWTLMSI+MNHPFHGGKSLPARQEDSKLQILSR +  G+   + T K+ G
Subjt:  SSILSLWIEEKGARQEEDCNMREAR-SWTLMSIQMNHPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSG

KAB5511300.1 hypothetical protein DKX38_030095 [Salix brachista]4.7e-0844.86Show/hide
Query:  GKYTEKTS--SILSLWIEEKGARQEEDCNMREARSWTLMSIQMNHPFHGGKSLPARQEDSKLQILSR-CSFSGVSKGVETHKNSGMEMERDVTPVPSEMI
        G Y E++   S+  ++  + G   E D ++          IQMNHPFHGGKSLPARQEDSKLQILSR  S  G  KG     NS +E   DV  V S  +
Subjt:  GKYTEKTS--SILSLWIEEKGARQEEDCNMREARSWTLMSIQMNHPFHGGKSLPARQEDSKLQILSR-CSFSGVSKGVETHKNSGMEMERDVTPVPSEMI

Query:  EHAEPNL
           +PNL
Subjt:  EHAEPNL

KAF1876802.1 hypothetical protein Lal_00043441 [Lupinus albus]3.4e-1161.9Show/hide
Query:  KGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS
        KGA+++EDCNMREAR                 WTLMSI++NHPFHGGKSLPARQEDSK +ILS
Subjt:  KGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS

PPS07120.1 hypothetical protein GOBAR_AA13525 [Gossypium barbadense]3.3e-2247.4Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARQEEDCNMREA----------------RSWTLMSIQMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     K A+QE DC MREA                RSW  M I+MN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARQEEDCNMREA----------------RSWTLMSIQMN

Query:  HPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+  F G+    +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSGMEMERDVTPVPSEM

RYR17226.1 hypothetical protein Ahy_B03g061995 [Arachis hypogaea]2.2e-1057.33Show/hide
Query:  SSILSLWI--EEKGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     KGA+++EDCN+REAR                 WTLMSI+ N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EEKGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS

TrEMBL top hitse value%identityAlignment
A0A0A0L231 Uncharacterized protein2.1e-5975.45Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARQEEDCNMREARSWTLMSIQMNHPFHGGKSLPARQEDSKLQ
        MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGK     SSI SLWIEEKG              WTLMSI+MNHPFHGGKSLPARQEDSKLQ
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARQEEDCNMREARSWTLMSIQMNHPFHGGKSLPARQEDSKLQ

Query:  ILSR--CSFSGVSKGVETHKNSGMEMERDVTPVPSEMIEHAEPNLLHIKPALFRSGKSCGFMKPCAI
        ILSR    FSG  +GVETHKNSGMEME+      S   EHAEPNLLH+KPALFRSGKS GFMKPCA+
Subjt:  ILSR--CSFSGVSKGVETHKNSGMEMERDVTPVPSEMIEHAEPNLLHIKPALFRSGKSCGFMKPCAI

A0A2P5XUU9 Uncharacterized protein ycf681.6e-2247.4Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARQEEDCNMREA----------------RSWTLMSIQMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     K A+QE DC MREA                RSW  M I+MN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARQEEDCNMREA----------------RSWTLMSIQMN

Query:  HPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+  F G+    +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSGMEMERDVTPVPSEM

A0A444ZST6 Uncharacterized protein1.1e-1057.33Show/hide
Query:  SSILSLWI--EEKGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     KGA+++EDCN+REAR                 WTLMSI+ N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EEKGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS

A0A5N5IXQ9 Uncharacterized protein ycf682.6e-1260.53Show/hide
Query:  SSILSLWIEEKGARQEEDCNMREAR-SWTLMSIQMNHPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSG
        S ILSLW EEK A  +    +   + SWTLMSI+MNHPFHGGKSLPARQEDSKLQILSR +  G+   + T K+ G
Subjt:  SSILSLWIEEKGARQEEDCNMREAR-SWTLMSIQMNHPFHGGKSLPARQEDSKLQILSRCSFSGVSKGVETHKNSG

A0A6A5N1D4 Uncharacterized protein1.7e-1161.9Show/hide
Query:  KGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS
        KGA+++EDCNMREAR                 WTLMSI++NHPFHGGKSLPARQEDSK +ILS
Subjt:  KGARQEEDCNMREAR----------------SWTLMSIQMNHPFHGGKSLPARQEDSKLQILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGCTCGGCAGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCAGATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGTTGTTCATTTTCAGGGGTC
TCGAAGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGATAGAACATGCTGAGCCAAATCTTCTTCATATAAA
ACCTGCTTTATTTAGATCAGGAAAATCATGCGGTTTTATGAAACCGTGTGCTATAAACTCGAATCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGCTCGGCAGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCAGATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGTTGTTCATTTTCAGGGGTC
TCGAAGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGATAGAACATGCTGAGCCAAATCTTCTTCATATAAA
ACCTGCTTTATTTAGATCAGGAAAATCATGCGGTTTTATGAAACCGTGTGCTATAAACTCGAATCCGTAG
Protein sequenceShow/hide protein sequence
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARQEEDCNMREARSWTLMSIQMNHPFHGGKSLPARQEDSKLQILSRCSFSGV
SKGVETHKNSGMEMERDVTPVPSEMIEHAEPNLLHIKPALFRSGKSCGFMKPCAINSNP