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Sed0016956 (gene) of Chayote v1 genome

Gene IDSed0016956
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationLG12:2944668..2947936
RNA-Seq ExpressionSed0016956
SyntenySed0016956
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]1.1e-4395.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGIEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]3.9e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGIEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]1.5e-4395.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKSLNP+FPILIRECSG+EPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]3.3e-4393.68Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LK+LNP+FPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]1.1e-4395.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLK+LNP+FPILIRECSG+EPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein5.4e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGIEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.9e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGIEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 21.9e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGIEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1DEP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 27.1e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKSLNP+FPILIRECSG+EPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.6e-4393.68Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LK+LNP+FPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 26.5e-1850.57Show/hide
Query:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLV
        RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.9e-1751.25Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 25.6e-3876.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLKSLNP+ PILIRECSG++PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative4.0e-3976.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLKSLNP+ PILIRECSG++PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGGGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCTCCCGCTAGGGCGTTTGTGGAAAAGAATTACAA
GGATCTCAAGTCTCTGAATCCCAGATTTCCGATATTGATCCGCGAATGCAGTGGAATCGAGCCGCAATTATGGGCTAGATATGACATGGGCGTTGAGAGGGTTGCTCGTC
TAGAGGGTTTGAGCGAAGCACAGATCTCGAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAATTACCTTAAGAAAATGCTTTTTTAGGCGAAGTCGAAATGGGCATTTGGGAGGCTGCAAGTTCATTTATTCATCGAAGGCAAAGAGACTTAGAGCTCGATTCACA
GAACAGCACGAGAACCAGAAAATGGCATGGAGGGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCTCCCGCTAGGGC
GTTTGTGGAAAAGAATTACAAGGATCTCAAGTCTCTGAATCCCAGATTTCCGATATTGATCCGCGAATGCAGTGGAATCGAGCCGCAATTATGGGCTAGATATGACATGG
GCGTTGAGAGGGTTGCTCGTCTAGAGGGTTTGAGCGAAGCACAGATCTCGAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAAGAAGTAATCAGGTGTGTTAT
TGTACTTGCAACAGACGTTAATAAATGCACGAGTGGAACTTTTGTTTGGGATGCTTTTCTGTTTACATTCTGTTCACTCAGCTATTTTGAGATTATTGCTCAAGTATTCA
GCATGATAAAACATGTTTCTGGTACGTATGTTTATTTGTTTATATGAATAGTTTCTCCAGGAGTTGTTGAAATGAGTTACTCATTTTTCTTAAAGAATTGATCGCATTAA
TTTCATAGAA
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKSLNPRFPILIRECSGIEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS