; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0016970 (gene) of Chayote v1 genome

Gene IDSed0016970
OrganismSechium edule (Chayote v1)
DescriptionRRM domain-containing protein
Genome locationLG01:24082318..24086005
RNA-Seq ExpressionSed0016970
SyntenySed0016970
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]2.5e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKL KA+ LSS KKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR+ PLNWSELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

XP_022134394.1 uncharacterized RNA-binding protein C1827.05c [Momordica charantia]4.3e-10492.42Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKLNKA+SL S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLIP EHVHP LWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQARQKRIRAAGI+YECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]4.3e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKLNKA+SL S KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR+ PLNWSELERK+HNKERTLGEHRKLVERILKR+QARQKRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]5.7e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKL+KA+S  S KKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEHLLKVHLI  EHVHP LWKGFNYR+KPL+WSELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QPAPKKIKFDED
Subjt:  QPAPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]1.7e-10390.57Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKL+KA+SLS  K+ESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR+ PLNWSELERKQHNKERTL EH+KLV+RI+KRDQARQKRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein4.0e-10389.62Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKA+KA+KKKLNKA+ LSS KKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKS+HFGY+EFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR++PLNWSELERK HNKERTL EH+KLV+RILKRDQARQKRIRAAGIDYECPEIVG  
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c1.2e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKL KA+ LSS KKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR+ PLNWSELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

A0A6J1BYN0 uncharacterized RNA-binding protein C1827.05c2.1e-10492.42Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKLNKA+SL S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLIP EHVHP LWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQARQKRIRAAGI+YECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDE
        QPAPKKIKFDE
Subjt:  QPAPKKIKFDE

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like2.1e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKLNKA+SL S KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEH+LKVHLI  EHVHP LWKGFNYR+ PLNWSELERK+HNKERTLGEHRKLVERILKR+QARQKRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QP PKKIKFDED
Subjt:  QPAPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like2.7e-10491.51Show/hide
Query:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE
        MGAKAKKA+KKKL+KA+S  S KKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFE
Subjt:  MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD
        SPEVAKIVADSMHNYLLYEHLLKVHLI  EHVHP LWKGFNYR+KPL+WSELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGIDYECPEIVGS 
Subjt:  SPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSD

Query:  QPAPKKIKFDED
        QPAPKKIKFDED
Subjt:  QPAPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c6.0e-3243.23Show/hide
Query:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ +IEFES +VA +VA++MHNYLLY  LL+  +IP + VH N++
Subjt:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLW

Query:  KGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYE
        KG +  +K +  + + R QH K  +  +  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein2.6e-2738.71Show/hide
Query:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNY
        Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G++EFES +VAKI A++M+NYL  E LLK H IP E VH  L++ ++ 
Subjt:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNY

Query:  RYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIV
         +K  ++  +  K++N+ R+L +  ++ ER  K+++  +KR+   GIDY  P +V
Subjt:  RYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like6.9e-2843.36Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + Y+EFE  EVAKIVAD+M+NYL  E LLK   +P E VHP L+ G   +++      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSE

Query:  LERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E +K+ +R+L ++   +KR+   GIDY+ P
Subjt:  LERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.7e-2641.78Show/hide
Query:  TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLN
        T  V+YIG IP    E +++ +F QFG V RLR++R++KTG S+ + Y+E+E  EVAKIVAD+M+NYL  E LLK   +  E VHP L+ G N R++   
Subjt:  TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLN

Query:  WSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP
           + R  +N +R   E +K+ +R++ ++   +KR+   GIDY+ P
Subjt:  WSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein9.0e-2843.36Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R++KTG S+ +G++EFE  EVAKIVA++M+NYL+ E ++K H+IP E VH  L+ G    +K   +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSE

Query:  LERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP
        + R  +NK  T  + +K+  ++L ++   +KR+ A GIDY+ P
Subjt:  LERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECP

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-0736.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-0736.23Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0634.67Show/hide
Query:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F  P VA+ V    H
Subjt:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-0633.78Show/hide
Query:  VQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH
        +++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F  P VA+ V    H
Subjt:  VQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-7463.35Show/hide
Query:  MGAKAKKALKKKLNK-ASSLSSKK-------KESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS
        MGAKAKKALKK + K A+S SS +       K SADFLPLEGGP RK PV   PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS
Subjt:  MGAKAKKALKKKLNK-ASSLSSKK-------KESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKS

Query:  RHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDY
        +HFG+I+FE PEVA+I A +M++YLL EH+LKVH+I  E+V PNLW+GF   +KP++  ++ER+Q NKERTL EHRK++++I+K+DQ R+KRI AAGI+Y
Subjt:  RHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDY

Query:  ECPEIVGSDQPAPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSDQPAPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTTTGAAGAAGAAACTCAATAAGGCCAGTTCTCTCTCCTCCAAAAAGAAGGAATCTGCAGATTTCTTGCCATTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGTACAGAAGCCACTGGAAAGTACTGCTACTGTTCTTTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGT
TTGGAAAAGTTAAGAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTGTAGCTGAT
TCTATGCATAACTATTTGTTGTACGAACACCTTCTGAAGGTCCACCTAATTCCTAACGAGCACGTTCATCCTAATCTATGGAAGGGTTTTAACTATCGCTATAAGCCCTT
AAACTGGTCTGAACTTGAGCGTAAACAGCATAATAAGGAAAGGACCTTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTGGGCAGTGACCAACCAGCGCCTAAGAAGATCAAGTTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
GCCGTCTTCAAATCCTAAACCCTAATGTCCGTTTTATAGTTTTCGCCTTCAAGCTTTCTCCTCACCATTTTAGATTTCGTTCTTCATAAATTTGTAGTTGTTCGTTTGTT
CGAGTTCAATGGGGGCTAAGGCGAAGAAAGCTTTGAAGAAGAAACTCAATAAGGCCAGTTCTCTCTCCTCCAAAAAGAAGGAATCTGCAGATTTCTTGCCATTGGAGGGT
GGTCCTGGGCGTAAGTTACCGGTACAGAAGCCACTGGAAAGTACTGCTACTGTTCTTTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTT
CGGACAGTTTGGAAAAGTTAAGAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTG
TAGCTGATTCTATGCATAACTATTTGTTGTACGAACACCTTCTGAAGGTCCACCTAATTCCTAACGAGCACGTTCATCCTAATCTATGGAAGGGTTTTAACTATCGCTAT
AAGCCCTTAAACTGGTCTGAACTTGAGCGTAAACAGCATAATAAGGAAAGGACCTTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACA
GAAGAGGATAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTGGGCAGTGACCAACCAGCGCCTAAGAAGATCAAGTTCGATGAAGATTAGAATGAGCGTTTAG
TTCATAGAAGCTAAAGTGTTAATGCAGAAAGGGGAAAGGTGAAGAATGATGGGCTGTTGAGCTGTTGCATCTTTCCAGTTTCTTATGCTGATCTCTAAATTTTGATCTTT
GAAATTTTGTCAAACGAATTTTATACTATCTTTAGTTTGTATTGCCTTTTATAAAAATGAAAAGGAAAAAAAAAATTGTATTGAAGCTTGTTTATGGCTTACAAATCTGA
CTCGCAATGATATGAACTGAATGGTAAATTTGAAAGTCGAACCATGTCAGATCTACTA
Protein sequenceShow/hide protein sequence
MGAKAKKALKKKLNKASSLSSKKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVAD
SMHNYLLYEHLLKVHLIPNEHVHPNLWKGFNYRYKPLNWSELERKQHNKERTLGEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSDQPAPKKIKFDED