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Sed0016972 (gene) of Chayote v1 genome

Gene IDSed0016972
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG07:11614381..11614663
RNA-Seq ExpressionSed0016972
SyntenySed0016972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2630735.1 unnamed protein product [Spirodela intermedia]6.3e-0645.59Show/hide
Query:  MCYPAVCVYRATALSFVPP----VAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MC+P  C   ATA   +PP     A   +E    P         CICSPT+HPGSFRCR H   YKWV
Subjt:  MCYPAVCVYRATALSFVPP----VAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

ESR64378.1 hypothetical protein CICLE_v10010038mg [Citrus clementina]3.7e-0646.75Show/hide
Query:  MCYP-AVCVYRATALSFVP--------PVAAAQEE-----AVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW
        MCYP  V +   T L  V         PV  A EE     A    GSGG +  +C+CSPTTHPGSFRCR HH  Y W
Subjt:  MCYP-AVCVYRATALSFVP--------PVAAAQEE-----AVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW

KGN45357.1 hypothetical protein Csa_016243 [Cucumis sativus]5.3e-1364.18Show/hide
Query:  MCYPAVCVYRATALSFVP---PVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MCYP +  +R TA SF      V AA EEAVRQ  SGG   YKCICSPTTHPGSF+CRFH   YKWV
Subjt:  MCYPAVCVYRATALSFVP---PVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

KVH93914.1 hypothetical protein Ccrd_004032 [Cynara cardunculus var. scolymus]2.2e-0650Show/hide
Query:  PPVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW
        P +  A+E+  R  G+  A+  +C+CSPT+HPGSFRCR+HH  Y W
Subjt:  PPVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW

PIN06441.1 hypothetical protein CDL12_21010 [Handroanthus impetiginosus]2.2e-0643.9Show/hide
Query:  MCYPA----VCVYR-ATALSFVPPVAAAQEEAVRQP-------------GSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MCYP+     C Y  A+    V  VA A E A R+              G GG I   C+CSPT HPGSFRCR HH  Y+WV
Subjt:  MCYPA----VCVYR-ATALSFVPPVAAAQEEAVRQP-------------GSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

TrEMBL top hitse value%identityAlignment
A0A0A0KAE1 Uncharacterized protein2.6e-1364.18Show/hide
Query:  MCYPAVCVYRATALSFVP---PVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MCYP +  +R TA SF      V AA EEAVRQ  SGG   YKCICSPTTHPGSF+CRFH   YKWV
Subjt:  MCYPAVCVYRATALSFVP---PVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

A0A103XNQ1 Uncharacterized protein1.0e-0650Show/hide
Query:  PPVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW
        P +  A+E+  R  G+  A+  +C+CSPT+HPGSFRCR+HH  Y W
Subjt:  PPVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW

A0A2G9GMB1 Uncharacterized protein1.0e-0643.9Show/hide
Query:  MCYPA----VCVYR-ATALSFVPPVAAAQEEAVRQP-------------GSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MCYP+     C Y  A+    V  VA A E A R+              G GG I   C+CSPT HPGSFRCR HH  Y+WV
Subjt:  MCYPA----VCVYR-ATALSFVPPVAAAQEEAVRQP-------------GSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

A0A7I8JII1 Hypothetical protein3.0e-0645.59Show/hide
Query:  MCYPAVCVYRATALSFVPP----VAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        MC+P  C   ATA   +PP     A   +E    P         CICSPT+HPGSFRCR H   YKWV
Subjt:  MCYPAVCVYRATALSFVPP----VAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

V4TV07 Uncharacterized protein1.8e-0646.75Show/hide
Query:  MCYP-AVCVYRATALSFVP--------PVAAAQEE-----AVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW
        MCYP  V +   T L  V         PV  A EE     A    GSGG +  +C+CSPTTHPGSFRCR HH  Y W
Subjt:  MCYP-AVCVYRATALSFVP--------PVAAAQEE-----AVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein6.0e-0750Show/hide
Query:  RQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV
        R  G GG    KC+CSP+ HP SF+CR+H   Y+W+
Subjt:  RQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV

AT1G67910.1 unknown protein9.6e-0578.95Show/hide
Query:  CICSPTTHPGSFRCRFHHT
        C+CSPTTHPGSFRCR H +
Subjt:  CICSPTTHPGSFRCRFHHT

AT3G13227.1 serine-rich protein-related1.5e-0547.5Show/hide
Query:  VRQPGSGG----------AINYKCICSPTTHPGSFRCRFH
        VR+ G GG          ++   C+C+PTTHPGSFRCR+H
Subjt:  VRQPGSGG----------AINYKCICSPTTHPGSFRCRFH

AT5G20370.1 serine-rich protein-related3.3e-0588.89Show/hide
Query:  KCICSPTTHPGSFRCRFH
        KC+CSPTTHPGSFRC FH
Subjt:  KCICSPTTHPGSFRCRFH

AT5G55980.1 serine-rich protein-related7.4e-0564Show/hide
Query:  SGGAINYKCICSPTTHPGSFRCRFH
        SG +    C+CSPTTH GSFRCR+H
Subjt:  SGGAINYKCICSPTTHPGSFRCRFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTATCCTGCCGTTTGCGTTTACAGAGCCACCGCGTTGAGCTTTGTTCCGCCGGTAGCGGCGGCGCAGGAGGAGGCGGTCCGGCAGCCGGGGAGTGGCGGTGCAAT
TAATTACAAGTGTATTTGCTCGCCCACGACTCACCCAGGTTCTTTCAGATGTAGATTTCATCATACAGCCTATAAATGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
GCCTCTCTTTCTTCTCTTTCCCTTTCTTTTAAGATAAACTCTTCCATCATCCATTTTCACCATTACTAATATTTGCAAAAAAGAAAAGATGTGCTATCCTGCCGTTTGCG
TTTACAGAGCCACCGCGTTGAGCTTTGTTCCGCCGGTAGCGGCGGCGCAGGAGGAGGCGGTCCGGCAGCCGGGGAGTGGCGGTGCAATTAATTACAAGTGTATTTGCTCG
CCCACGACTCACCCAGGTTCTTTCAGATGTAGATTTCATCATACAGCCTATAAATGGGTTTGA
Protein sequenceShow/hide protein sequence
MCYPAVCVYRATALSFVPPVAAAQEEAVRQPGSGGAINYKCICSPTTHPGSFRCRFHHTAYKWV