CuGenDBv2

Gene ID	Sed0016974
Organism	Sechium edule (Chayote v1)
Description	transcription initiation factor TFIID subunit 7
Genome location	LG01:22072251..22074357
RNA-Seq Expression	Sed0016974
Synteny	Sed0016974
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0005669 - transcription factor TFIID complex (cellular component)
InterPro domains	IPR006751 - TAFII55 protein, conserved region IPR037817 - Transcription initiation factor TFIID subunit 7

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022960612.1 transcription initiation factor TFIID subunit 7 [Cucurbita moschata]

5.5e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVR+PGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD R ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

XP_022990127.1 transcription initiation factor TFIID subunit 7 isoform X1 [Cucurbita maxima]

5.5e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

XP_022990128.1 transcription initiation factor TFIID subunit 7 isoform X2 [Cucurbita maxima]

5.5e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

XP_022990129.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima]

5.5e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

XP_023516679.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo]

2.5e-63

73.12

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD R ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C8V9 transcription initiation factor TFIID subunit 7

4.5e-63

72.04

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N       QQD R EN HH +AKPAS  A KPDVMETETN+G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

A0A6J1H9I8 transcription initiation factor TFIID subunit 7

2.7e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVR+PGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD R ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

A0A6J1JHS5 transcription initiation factor TFIID subunit 7 isoform X1

2.7e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

A0A6J1JR83 transcription initiation factor TFIID subunit 7 isoform X3

2.7e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

A0A6J1JSC8 transcription initiation factor TFIID subunit 7 isoform X2

2.7e-63

72.58

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQFVLRVPPS                           DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTV I+AAD+ QMIMVREPGDPAPDSTEY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG
        RHGLTPPMRDARKRRFRRE DLNPELVRRVE DLLNIMA G T+N        QD + ENSHH SAKPAST AAKPDVMETET +G
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN-------QQDGRGENSHHVSAKPASTSAAKPDVMETETNLG

SwissProt top hits

e value

%identity

Alignment

B9DG24 Transcription initiation factor TFIID subunit 7

1.3e-43

62.07

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQF+LRVPPS                           DGR+GTF IG+D FPASLLDLP VVES+KTYDD   ++ AD+ QMIMVREPGDPAP++ EY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN
        RHGLTPPM+DARKRRFRRE DLNPELV+RVE DLLNI++ G  +N
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN

O13701 Transcription initiation factor TFIID subunit 7

2.4e-08

Show/hide

Query:  MEEQFVLRVPP--------------------------SDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVRE--PGDPAPDSTE
        +EEQ +LR+PP                           D R     +    + A L+DLPC++ES K++D  V  +AAD+ QM++  E    + +  +T+
Subjt:  MEEQFVLRVPP--------------------------SDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVRE--PGDPAPDSTE

Query:  -------YRHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKNQQDGRGENSHHVSAKPASTSAAKPDVMETETNLGSLQGV
               Y HGLT PM   R++RFR+   ++   +  VEN++  ++A        D R E++ +     A  +      +  +T+   + G+
Subjt:  -------YRHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKNQQDGRGENSHHVSAKPASTSAAKPDVMETETNLGSLQGV

Q6R1L1 Transcription initiation factor TFIID subunit 7

3.1e-08

30.94

Show/hide

Query:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIM----------VREPG
        +E QF+LR+PP                           DGR G   +      A L+DLPCV+ES KT D     + AD+ QM++          V EP 
Subjt:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIM----------VREPG

Query:  DPA-PDSTE-----------YRHGLTPPMRDARKRRFRR
         PA P +++           + HG+T P+++ RKRRFR+
Subjt:  DPA-PDSTE-----------YRHGLTPPMRDARKRRFRR

Q9D3R9 Transcription initiation factor TFIID subunit 7-like

2.1e-09

27.03

Show/hide

Query:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTE--
        +EEQF+LR+PP                           DG      + +   PA L++LPCV+ S KT D     + ADV QM++    G+P     E  
Subjt:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTE--

Query:  ---------------------YRHGLTPPMRDARKRRFRRELDLNPEL
                             ++HG+TPP+++ RK+RFR+     P++
Subjt:  ---------------------YRHGLTPPMRDARKRRFRRELDLNPEL

Q9R1C0 Transcription initiation factor TFIID subunit 7

1.1e-08

29.5

Show/hide

Query:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTE--
        +E QF+LR+PP                           DGR G   +      A L+DLPCV ES KT D     + AD+ QM++    GD  P   E  
Subjt:  MEEQFVLRVPPS--------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTE--

Query:  --------------------YRHGLTPPMRDARKRRFRR
                            + HG+T P+++ RKRRFR+
Subjt:  --------------------YRHGLTPPMRDARKRRFRR

Arabidopsis top hits

e value

%identity

Alignment

AT1G55300.1 TBP-associated factor 7

3.5e-47

54.89

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQF+LRVPPS                           DGR+GTF IG+D FPASLLDLP VVES+KTYDD   ++ AD+ QMIMVREPGDPAP++ EY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN----QQDGRGENSHHVSAKPASTS---AAKPDVMETETN
        RHGLTPPM+DARKRRFRRE DLNPELV+RVE DLLNI++ G  +N    ++    EN+ + S K +S+S     KP+  ET T+
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN----QQDGRGENSHHVSAKPASTS---AAKPDVMETETN

AT1G55300.2 TBP-associated factor 7

9.4e-45

62.07

Show/hide

Query:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY
        MEEQF+LRVPPS                           DGR+GTF IG+D FPASLLDLP VVES+KTYDD   ++ AD+ QMIMVREPGDPAP++ EY
Subjt:  MEEQFVLRVPPS---------------------------DGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEY

Query:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN
        RHGLTPPM+DARKRRFRRE DLNPELV+RVE DLLNI++ G  +N
Subjt:  RHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNIMARGNTKN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGAGCAGTTTGTACTGAGGGTTCCACCTTCTGATGGGAGAAGTGGAACTTTTGCCATCGGTGATGACCATTTTCCAGCATCTCTTCTTGATCTCCCTTGTGTAGT
GGAGTCATATAAAACATATGATGATACTGTGTCAATCGAAGCTGCGGACGTTGATCAGATGATTATGGTTAGAGAACCGGGTGACCCTGCTCCAGATTCGACTGAGTATA
GACATGGTCTGACCCCTCCTATGAGGGACGCTCGTAAACGTAGATTTCGAAGAGAGCTGGATTTGAATCCTGAGCTTGTACGACGTGTGGAGAACGATTTACTGAACATC
ATGGCAAGAGGAAATACCAAAAATCAACAGGATGGTAGAGGTGAGAATTCTCATCATGTTAGTGCAAAGCCTGCTTCCACATCAGCGGCAAAGCCTGATGTGATGGAAAC
TGAAACAAATTTGGGGAGCCTGCAAGGAGTGATTCTGATCATTCAATTGATTCGGTATTTTGTCATGCAGTTCAAATCAAAATGTTGGTCTCTGATGAAAGTTGTATCAG
TCTGA

mRNA sequence

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Protein sequence

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MEEQFVLRVPPSDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVSIEAADVDQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRRELDLNPELVRRVENDLLNI
MARGNTKNQQDGRGENSHHVSAKPASTSAAKPDVMETETNLGSLQGVILIIQLIRYFVMQFKSKCWSLMKVVSV

Sed0016974 (gene) of Chayote v1 genome