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Sed0016975 (gene) of Chayote v1 genome

Gene IDSed0016975
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG13:21055659..21056383
RNA-Seq ExpressionSed0016975
SyntenySed0016975
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608586.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3779.8Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K  QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQSL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

XP_017421316.1 PREDICTED: auxin-induced protein 15A-like [Vigna angularis]2.7e-3573.74Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K SQTT LKQILK CSSLG+KN +  D+  LPLDVPKGHFAVYVG NR+R+I+PI+FL HPQFQ LL+QA +EFGFDHDMGLTIPC E+ F+SL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

XP_022937029.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.4e-3777Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

XP_022941161.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]7.6e-3877.36Show/hide
Query:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS
        MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQS
Subjt:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS

Query:  LASTLR
        L STLR
Subjt:  LASTLR

XP_023535895.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]7.6e-3878Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K  QT  LKQ++K CSS+GRK  HH+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

TrEMBL top hitse value%identityAlignment
A0A0L9UHN8 Uncharacterized protein1.3e-3573.74Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K SQTT LKQILK CSSLG+KN +  D+  LPLDVPKGHFAVYVG NR+R+I+PI+FL HPQFQ LL+QA +EFGFDHDMGLTIPC E+ F+SL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

A0A6J1F9Z6 auxin-responsive protein SAUR50-like3.1e-3777Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

A0A6J1FKC5 auxin-responsive protein SAUR50-like3.7e-3877.36Show/hide
Query:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS
        MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQS
Subjt:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS

Query:  LASTLR
        L STLR
Subjt:  LASTLR

A0A6J1IE85 auxin-responsive protein SAUR50-like3.1e-3777Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K  QT  LKQ++K CSS+GRK   H+D+  GLPLDVPKGHF VYVG NR+R+I+PITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDE  FQSL STLR
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDE-HGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

A0A6J1J0M7 auxin-responsive protein SAUR50-like3.7e-3877.36Show/hide
Query:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS
        MA++KS    QT  LKQ+LK CSSLG+K Q  +DE GLPLDVPKGHF VYVG NR+R I+PIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDE FFQS
Subjt:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQS

Query:  LASTLR
        L STLR
Subjt:  LASTLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.6e-3670.71Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K +QT  LKQILK CSSLG+KN   +DE  LPLDVPKGHF VYVG NR+R+I+PI+FL HP+FQ LLQ+A +EFGFDHDMGLTIPCDEL FQ+L S +R
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

P0DKL1 Auxin-responsive protein SAUR502.0e-2554.08Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTL
        K++Q   +K+I+K CSS G+ N    D+ GLP DVPKGHF VYVG  R R+I+PI+ L+HP FQ LLQ++ +EFGF+HDMG+ IPC E+ F S  S +
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTL

P32295 Indole-3-acetic acid-induced protein ARG71.0e-1661.19Show/hide
Query:  LDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQSLASTL
        LD PKG+ AVYVG N  RF+IP++ LN P FQ LL QA +EFG+DH M GLTIPC E  FQ + S L
Subjt:  LDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQSLASTL

P33081 Auxin-induced protein 15A5.0e-1659.09Show/hide
Query:  DVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQSLASTL
        D PKG+ AVYVG    RF+IP+++LN P FQ LL QA +EFG+DH M GLTIPC E  FQ + S L
Subjt:  DVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQSLASTL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 105.7e-2855.36Show/hide
Query:  MALKK------SQTTTLKQILKHCSSLGRKNQ----HHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCD
        MA+K+      SQ  ++KQI+K CSSL +       ++  E  LP DVPKGHF VYVG NR+R+I+PI++L+H +FQ LL+ A +EFGFDHDMGLTIPCD
Subjt:  MALKK------SQTTTLKQILKHCSSLGRKNQ----HHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCD

Query:  ELFFQSLASTLR
        E+FF+SL S  R
Subjt:  ELFFQSLASTLR

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.7e-3260.58Show/hide
Query:  KKSQTTTLKQILKHCSSLGRK------NQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSL
        K +QTT +KQILK CSSLG+K      + H  D   LPLDVPKGHF VYVG NR R+++PI+FL  P+FQ+LLQQA +EFGFDH+MGLTIPC+E+ F+SL
Subjt:  KKSQTTTLKQILKHCSSLGRK------NQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSL

Query:  ASTL
         +++
Subjt:  ASTL

AT1G75580.1 SAUR-like auxin-responsive protein family1.4e-3463.89Show/hide
Query:  MALKK----SQTTTLKQILKHCSSLGRK--NQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFF
        MA+KK    +QT  +KQILK CSSLG+K  N +  DE+G PL+VPKGHF VYVG NR R+++PI+FL  P+FQ+LLQQA +EFGFDHDMGLTIPC+E+ F
Subjt:  MALKK----SQTTTLKQILKHCSSLGRK--NQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFF

Query:  QSLASTLR
        +SL S LR
Subjt:  QSLASTLR

AT2G16580.1 SAUR-like auxin-responsive protein family5.4e-3467Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKN-QHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K +QT  L+QILK CSSLG+KN    ++E  LPLDVPKGHF VYVGHNR+R+I+PI+FL +  FQ LL++A +EFGFDHDMGLTIPCDELFFQ L S +R
Subjt:  KKSQTTTLKQILKHCSSLGRKN-QHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

AT4G34760.1 SAUR-like auxin-responsive protein family4.0e-3770.71Show/hide
Query:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR
        K +QT  LKQILK CSSLG+KN   +DE  LPLDVPKGHF VYVG NR+R+I+PI+FL HP+FQ LLQ+A +EFGFDHDMGLTIPCDEL FQ+L S +R
Subjt:  KKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR

AT4G38860.1 SAUR-like auxin-responsive protein family3.5e-3366.36Show/hide
Query:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQ
        MA+K+S    QT  LKQILK CSSLG+K    +DE GLPLDVPKGHF VYVG  RTR+I+PI+FL HP+F ILLQQA +EFGF HDM GLTIPC+E+ F 
Subjt:  MALKKS----QTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDELFFQ

Query:  SLASTLR
        SL S +R
Subjt:  SLASTLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTGAAAAAGTCCCAAACCACCACCCTAAAGCAGATCCTCAAGCACTGTTCCAGCCTGGGCCGGAAAAACCAGCACCATTTCGACGAGCACGGCCTCCCGTTAGA
CGTCCCGAAAGGCCATTTCGCGGTCTACGTCGGCCACAACCGAACCAGGTTCATAATCCCAATCACATTCCTCAACCACCCCCAGTTCCAAATCTTGCTCCAACAAGCCG
CGGATGAATTCGGGTTCGATCACGACATGGGCCTCACCATTCCTTGCGATGAACTCTTCTTTCAGTCCCTTGCTTCCACTCTGCGATGA
mRNA sequenceShow/hide mRNA sequence
GTAGAAGGTAAAGTAAAATGAGTAGAGGGGCCAAGTTGTGGAAGAGAAGAGTAGCATTAAGGTGGGGGCTCCAAACACTCTGTTTTTCTCCCTCCATAAATACCCCTCCA
AATCCCAATTCCAATCTCATCTTTTCCCCCACAAAAAAATGGCCTTGAAAAAGTCCCAAACCACCACCCTAAAGCAGATCCTCAAGCACTGTTCCAGCCTGGGCCGGAAA
AACCAGCACCATTTCGACGAGCACGGCCTCCCGTTAGACGTCCCGAAAGGCCATTTCGCGGTCTACGTCGGCCACAACCGAACCAGGTTCATAATCCCAATCACATTCCT
CAACCACCCCCAGTTCCAAATCTTGCTCCAACAAGCCGCGGATGAATTCGGGTTCGATCACGACATGGGCCTCACCATTCCTTGCGATGAACTCTTCTTTCAGTCCCTTG
CTTCCACTCTGCGATGACTTCCAAACCCCGCCCCTCCATGAAGTTGGAATCGCTAGCAATCCTCGGTCAGCCCCGGTTCTCTCTCTTTTTTTTAGAGAAATTTGGGTCAT
CTAAATTATCTAAATTTTCATGCTCATGTCCCTCAATTTGGATCACACTACCACTCAAATTAGACGACATAGGTGGACATGAAAATTTAGGTTGCATGACCTATTTTCTT
TTTTCTAATTATTTTATAGGGTAGATCCATACCTTTTCTTTTTCTTTTTCTTTTTTGCCAACCCC
Protein sequenceShow/hide protein sequence
MALKKSQTTTLKQILKHCSSLGRKNQHHFDEHGLPLDVPKGHFAVYVGHNRTRFIIPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDELFFQSLASTLR