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Sed0016988 (gene) of Chayote v1 genome

Gene IDSed0016988
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:5658463..5659070
RNA-Seq ExpressionSed0016988
SyntenySed0016988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]3.1e-4672.95Show/hide
Query:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF
        M T E  NGADLNP AKEWNP++DCA EEDRCLFLTFSNG+PL+EHQI+ FFTRK G CIERVYVH  +G  Q PLFGKVVF ASS+PAI++ GKEE KF
Subjt:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF

Query:  SIESRTLWCKRYEARKARFRIS
        SI+S+T+WCK++EARKAR R S
Subjt:  SIESRTLWCKRYEARKARFRIS

XP_022924654.1 uncharacterized protein LOC111432088 [Cucurbita moschata]1.8e-4677.88Show/hide
Query:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW
        G DLNP AKEW+P+HD A EEDRCLFLTFSNGYPL+EHQI++FFTRK G CIERVYVH ++G  +PPLFGKVVF ASS+PAII+EGK+E KFSIESRT+W
Subjt:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW

Query:  CKRYEARKARFRI
        CKRYEARKAR+R+
Subjt:  CKRYEARKARFRI

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]1.5e-4575.41Show/hide
Query:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK
        MD+ +  NGAD LNP+AKEWNP+ DCA EEDRCLFLTFSNG PLSEHQI+NFFTR  G CIERVYVH   G  Q PLFGKVVF ASS+PAII+ GK+E K
Subjt:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK

Query:  FSIESRTLWCKRYEARKARFRI
        FSIES+TLWCKRYEARK RFR+
Subjt:  FSIESRTLWCKRYEARKARFRI

XP_023528303.1 uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo]6.9e-4676.99Show/hide
Query:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW
        G DLNP AKEW+P+HD A EEDRCLFLTFSNGYPL+EHQI++FFTRK G CIERVYVH ++G  +PPLFGKVVF ASS+PAII+EGK+E KF IESRT+W
Subjt:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW

Query:  CKRYEARKARFRI
        CKRYEARKAR+R+
Subjt:  CKRYEARKARFRI

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]4.1e-4676.23Show/hide
Query:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK
        MD+ +  NGAD LNP+AKEWNP+ DCA EEDRCLFLTFSNG PLSEHQI+NFFTRK G CIERVYVH   G  Q PLFGKVVF ASS+PAII+ GK+E K
Subjt:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK

Query:  FSIESRTLWCKRYEARKARFRI
        FSIES+TLWCKRYEARK RFR+
Subjt:  FSIESRTLWCKRYEARKARFRI

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein8.8e-3965.57Show/hide
Query:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF
        M T E  NGADLNP AKEWNP++DCA EEDRCLFLTFSNG+PL+E+QI+ FFT        RVYVH  +G  Q PLFGKVVF ASS+PAI++ GKEE KF
Subjt:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF

Query:  SIESRTLWCKRYEARKARFRIS
        SI+++T+WCK++E+RKAR R S
Subjt:  SIESRTLWCKRYEARKARFRIS

A0A5A7U0U8 Uncharacterized protein1.5e-4672.95Show/hide
Query:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF
        M T E  NGADLNP AKEWNP++DCA EEDRCLFLTFSNG+PL+EHQI+ FFTRK G CIERVYVH  +G  Q PLFGKVVF ASS+PAI++ GKEE KF
Subjt:  MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKF

Query:  SIESRTLWCKRYEARKARFRIS
        SI+S+T+WCK++EARKAR R S
Subjt:  SIESRTLWCKRYEARKARFRIS

A0A6J1E9T6 uncharacterized protein LOC1114320888.8e-4777.88Show/hide
Query:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW
        G DLNP AKEW+P+HD A EEDRCLFLTFSNGYPL+EHQI++FFTRK G CIERVYVH ++G  +PPLFGKVVF ASS+PAII+EGK+E KFSIESRT+W
Subjt:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW

Query:  CKRYEARKARFRI
        CKRYEARKAR+R+
Subjt:  CKRYEARKARFRI

A0A6J1FZ16 uncharacterized protein LOC1114491947.5e-4675.41Show/hide
Query:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK
        MD+ +  NGAD LNP+AKEWNP+ DCA EEDRCLFLTFSNG PLSEHQI+NFFTR  G CIERVYVH   G  Q PLFGKVVF ASS+PAII+ GK+E K
Subjt:  MDTTEAINGAD-LNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVK

Query:  FSIESRTLWCKRYEARKARFRI
        FSIES+TLWCKRYEARK RFR+
Subjt:  FSIESRTLWCKRYEARKARFRI

A0A6J1IWW8 uncharacterized protein LOC1114792149.7e-4676.11Show/hide
Query:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW
        G DLNP AKEW+P+HD A EEDRCLFLTFSNGYPL+EHQI++FFTR+ G CIERVYVH ++G  +PPLFGKVVF ASS+PAII+EGK+E KF IESRT+W
Subjt:  GADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVH-QKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLW

Query:  CKRYEARKARFRI
        CKRYEARKAR+R+
Subjt:  CKRYEARKARFRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein3.1e-1237.65Show/hide
Query:  EDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVHQKGQNQPPLFGKVV--FSASSVPAIIMEGKEEVKFSIESRTLWCKRY
        +DR +FLTFS GYP+SE ++  +FTR+ G  IE V + +   N+ PLF K+V     +S+   I+  +   KF+I+ + +W ++Y
Subjt:  EDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVHQKGQNQPPLFGKVV--FSASSVPAIIMEGKEEVKFSIESRTLWCKRY

AT1G64870.1 unknown protein1.1e-1232.73Show/hide
Query:  WNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLG-PCIERVYVHQKGQN------------QPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRT
        WN  H  A++++R +FLTFS G+P+S  ++I+ FT   G  C+E VY+ + G N            Q PLF K+V  +      I+ G+E+ K+ I  + 
Subjt:  WNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLG-PCIERVYVHQKGQN------------QPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRT

Query:  LWCKRYEARK
        +W ++++  K
Subjt:  LWCKRYEARK

AT3G45200.1 unknown protein1.0e-1029.36Show/hide
Query:  WNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGP-CIERVYVHQKGQ-----------NQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTL
        WN  +  A+E DR LFLTFS GYP++  +II  FT++ G  C+E VY+    +            Q  LF ++V  + +    +++ +++ +  I  + +
Subjt:  WNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGP-CIERVYVHQKGQ-----------NQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTL

Query:  WCKRYEARK
        W ++Y+ R+
Subjt:  WCKRYEARK

AT5G11220.1 unknown protein5.0e-1028.57Show/hide
Query:  ASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGP-CIERVYVHQKGQN-----------QPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLWCKRY
        A++ +R +F+TFS G+P+S+ ++  FFT+  G  C+E VY+ +  +N           Q  LF K+V ++ +    I++G++  +F    + +W ++Y
Subjt:  ASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGP-CIERVYVHQKGQN-----------QPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLWCKRY

AT5G13620.1 unknown protein1.5e-1439.13Show/hide
Query:  ASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVHQKGQNQPPLFGKVVF-SASSVPAIIMEGKEEVKFSIESRTLWCKRYEARKA
        A E+DR +FLTFS GYPLSE ++  +FTR+ G  IE + +     N+  L+ K+V  SA+ +P I+ +G E  K++I  + +W ++Y  R +
Subjt:  ASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVHQKGQNQPPLFGKVVF-SASSVPAIIMEGKEEVKFSIESRTLWCKRYEARKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAACTGAGGCCATTAATGGAGCTGATTTGAACCCAGAAGCAAAAGAGTGGAACCCAGTTCACGATTGCGCTTCGGAGGAAGATCGATGCCTTTTTCTCACTTT
CTCAAATGGATATCCGCTCTCGGAGCACCAAATCATCAATTTCTTCACTCGAAAACTCGGACCGTGCATCGAAAGAGTGTATGTGCATCAGAAGGGTCAGAATCAACCTC
CATTGTTCGGGAAGGTGGTGTTTTCTGCATCTTCAGTTCCAGCAATCATTATGGAAGGAAAAGAGGAAGTCAAGTTTTCCATTGAGAGCCGGACGTTATGGTGTAAGAGA
TACGAGGCTCGAAAAGCTCGGTTTAGGATTTCGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACAACTGAGGCCATTAATGGAGCTGATTTGAACCCAGAAGCAAAAGAGTGGAACCCAGTTCACGATTGCGCTTCGGAGGAAGATCGATGCCTTTTTCTCACTTT
CTCAAATGGATATCCGCTCTCGGAGCACCAAATCATCAATTTCTTCACTCGAAAACTCGGACCGTGCATCGAAAGAGTGTATGTGCATCAGAAGGGTCAGAATCAACCTC
CATTGTTCGGGAAGGTGGTGTTTTCTGCATCTTCAGTTCCAGCAATCATTATGGAAGGAAAAGAGGAAGTCAAGTTTTCCATTGAGAGCCGGACGTTATGGTGTAAGAGA
TACGAGGCTCGAAAAGCTCGGTTTAGGATTTCGGGTTAG
Protein sequenceShow/hide protein sequence
MDTTEAINGADLNPEAKEWNPVHDCASEEDRCLFLTFSNGYPLSEHQIINFFTRKLGPCIERVYVHQKGQNQPPLFGKVVFSASSVPAIIMEGKEEVKFSIESRTLWCKR
YEARKARFRISG