; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017003 (gene) of Chayote v1 genome

Gene IDSed0017003
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase Topors
Genome locationLG04:32877324..32882051
RNA-Seq ExpressionSed0017003
SyntenySed0017003
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006513 - protein monoubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593954.1 E3 ubiquitin-protein ligase Topors, partial [Cucurbita argyrosperma subsp. sororia]2.5e-12380.65Show/hide
Query:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK
        +REPARK  GE+FV KVISPAICGETCPICL +LEDRTAAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWF KI LSSR+FRKERLP L+ AD LK
Subjt:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK

Query:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI
        IG+GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDRR+QA PSSV SC  +N+TG HG KEA+LERIKPWI
Subjt:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI

Query:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
         REL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

KAG7026294.1 E3 ubiquitin-protein ligase Topors, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-12280.29Show/hide
Query:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK
        +REPARK  GE+FV KVISPAICGETCPICL +LEDRTAAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWF KI LSSR+FRKERLP L+ AD LK
Subjt:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK

Query:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI
        IG+GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDR +QA PSSV SC  +N+TG HG KEA+LERIKPWI
Subjt:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI

Query:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
         REL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

XP_022930345.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita moschata]2.5e-12381.23Show/hide
Query:  EPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIG
        EPARK NGE+FV KVISPAICGETCPICL +LEDR AAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWF KI LSSR+FRKERLP L+ AD LKIG
Subjt:  EPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIG

Query:  VGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHR
        +GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDRR+QAVPSSV SC  +N+TG HG KEA+LERIKPWI R
Subjt:  VGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHR

Query:  ELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        EL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  ELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

XP_022999966.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima]1.6e-12580.57Show/hide
Query:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA
        MK  + EPARK NGE+FV KVISPAICG+TCPICL +LEDRTAAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWFCKI+LSSR+FRKERLP L+ A
Subjt:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA

Query:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI
        D LKIG+GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDRR+QAVPSSV SC  +N+TG HG KEA+LERI
Subjt:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI

Query:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        KPWI REL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

XP_023514952.1 E3 ubiquitin-protein ligase Topors [Cucurbita pepo subsp. pepo]1.1e-12379.51Show/hide
Query:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA
        M+  +REPARK NGE+FV KVISPAICGETCPICL +LEDRTAAVLTTCIHAYC+ CIRKWSNLKR+CPLCNAQFDSWFC I LSSR+FRKERLP L+ A
Subjt:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA

Query:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI
        D LKIG+GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWR SIYDRR+QAVPSSV SC  +N+T  HG KEA+LERI
Subjt:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI

Query:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        KPWI REL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

TrEMBL top hitse value%identityAlignment
A0A0A0KCD1 RING-type domain-containing protein5.0e-11775.27Show/hide
Query:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK
        +REPARK NGE+F++KVISPAICGETCPICL +LEDRTAAVLTTCIHAYC++CIRKWSNLKR+CPLCNAQFDSWF KI+LSS++FRKERL   + +DKLK
Subjt:  SREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLK

Query:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI
        +GVGSS+ DARG+LQSTR EL R RRSER+LTWRR F  RRG +S+PADV+ +RK QWRASIY+R +QAVPSSV SC  LN+ G  G KE +LERIKPWI
Subjt:  IGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWI

Query:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
         RELQ ILEDPDP IIVHLV +LFVA +EA SSQLN+EDD+L  LR FL+EKT+LFWHELRCFAGS LR+E YDSVVEY
Subjt:  HRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

A0A1S3C7X8 E3 ubiquitin-protein ligase Topors2.0e-11875.79Show/hide
Query:  MKPWS--REPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLD
        MKP S  REPARK NGE+F++KVISPAICGETCPICL +LEDRTAAVLTTCIHAYC+ CIRKWSNLKR+CPLCNAQFDSWF KI+LSS++FRKERL   +
Subjt:  MKPWS--REPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLD

Query:  SADKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLE
         ++KLK+GVGSS+ DARG+LQSTR EL R RRSER+LTWRR F  RRG +S+PADV+ +RKLQWRASIY+R +QAVPSSV SC  LNI G  G KE +LE
Subjt:  SADKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLE

Query:  RIKPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        RIKPWI RELQ ILEDPDP IIVHLV +LFVA LEA SSQLN+EDD+L  LR FL+EKT+LFWHELRCFAGS LR+E YDSVVEY
Subjt:  RIKPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

A0A6J1CAG7 E3 ubiquitin-protein ligase Topors3.3e-11675.97Show/hide
Query:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA
        MKP +REP RK N E+FVSKVISPAICGETCPICL +L+D T AVLT+CIHAYCV CIRKWS LKR+CPLCNAQF+SWF KI+ SS +FRKE LP L+  
Subjt:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA

Query:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI
        DKL  GVGSSR D+R +LQ  RNEL R RRSE  LTWRR F  RRG E VPADVIAQRKLQWRASIY+R +QAVPSSV   + LNI+G HGAKEA+LE+I
Subjt:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI

Query:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        KPWI RELQAILEDPDP IIVHLVT+LFV+ LEAPSSQLN EDD+LL L  FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

A0A6J1EQ79 E3 ubiquitin-protein ligase Topors isoform X11.2e-12381.23Show/hide
Query:  EPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIG
        EPARK NGE+FV KVISPAICGETCPICL +LEDR AAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWF KI LSSR+FRKERLP L+ AD LKIG
Subjt:  EPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIG

Query:  VGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHR
        +GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDRR+QAVPSSV SC  +N+TG HG KEA+LERIKPWI R
Subjt:  VGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHR

Query:  ELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        EL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  ELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

A0A6J1KEK6 E3 ubiquitin-protein ligase Topors isoform X17.7e-12680.57Show/hide
Query:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA
        MK  + EPARK NGE+FV KVISPAICG+TCPICL +LEDRTAAVLTTCIHAYCV CIRKWSNLKR+CPLCNAQFDSWFCKI+LSSR+FRKERLP L+ A
Subjt:  MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSA

Query:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI
        D LKIG+GSSR DAR +LQSTRNEL R+RRSER LTWRR F  RRG ESVP DVIA RKLQWRASIYDRR+QAVPSSV SC  +N+TG HG KEA+LERI
Subjt:  DKLKIGVGSSRNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERI

Query:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        KPWI REL+AIL DPDP IIVHLVT+LFVA LEAPSSQLN+E+D+L  LR FLYEKT+LFWHELRCFAGSSLR+E YDSVVEY
Subjt:  KPWIHRELQAILEDPDPIIIVHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

SwissProt top hitse value%identityAlignment
P08393 E3 ubiquitin-protein ligase ICP01.5e-0431.91Show/hide
Query:  GETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQ
        G+ C +C  ++          C+H +C+ C++ W  L+ +CPLCNA+
Subjt:  GETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQ

P29128 E3 ubiquitin-protein ligase ICP07.2e-0443.75Show/hide
Query:  TCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS
        +C ICL  +    AA    C+HA+C+ACIR+W   + +CPLC A   S
Subjt:  TCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS

P29129 E3 ubiquitin-protein ligase ICP09.4e-0442.55Show/hide
Query:  CPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS
        CPICL      T A    C+H +C+ CI++W+    +CPLCNA+  S
Subjt:  CPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS

P29836 E3 ubiquitin-protein ligase ICP07.2e-0443.75Show/hide
Query:  TCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS
        +C ICL  +    AA    C+HA+C+ACIR+W   + +CPLC A   S
Subjt:  TCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDS

Arabidopsis top hitse value%identityAlignment
AT1G72220.1 RING/U-box superfamily protein2.5e-0440.91Show/hide
Query:  CPICLTKL-EDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNA
        CP+CL +  ED +  +L  C HA+ ++CI  W +   +CPLC A
Subjt:  CPICLTKL-EDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNA

AT2G26000.1 zinc finger (C3HC4-type RING finger) family protein3.3e-0444.19Show/hide
Query:  TCPICLTKLEDRTAAVLTT-CIHAYCVACIRKWSNLKRSCPLC
        TCP+CL +L+  T  +LTT C H++  +CI  W +   SCP+C
Subjt:  TCPICLTKLEDRTAAVLTT-CIHAYCVACIRKWSNLKRSCPLC

AT2G35420.1 RING/U-box superfamily protein2.5e-0436Show/hide
Query:  GETCPICLTKLEDR-TAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFD
        G  C ICL++  D  T  ++T C H +   CI  W  L ++CP+C  + D
Subjt:  GETCPICLTKLEDR-TAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFD

AT2G39100.1 RING/U-box superfamily protein6.0e-6246.52Show/hide
Query:  FVSKVISPAICGETCPICLTKL-EDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIGVGSSRNDAR
        F  + I PA+ G++CPICL  L E R+AAV+T C H YC+ACIRKWS+ KR+CPLCN +FDSWF     +SR + KE+LP L   + L     ++ +D R
Subjt:  FVSKVISPAICGETCPICLTKL-EDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIGVGSSRNDAR

Query:  GVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHRELQAILEDP
         ++Q +R+ L  +    R L WRR F R     SVP  VI QRKLQWRASIY ++++AV         L++      K  + ERI+PWI RELQA+L DP
Subjt:  GVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHRELQAILEDP

Query:  DPIIIVHLVTTLFVATLEAPSSQLNSE-----DDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY
        DP +IVH  + LF+  LE  +++   +     +D + +LR FL +K ++FWHELRCFA S L +E YD+VVEY
Subjt:  DPIIIVHLVTTLFVATLEAPSSQLNSE-----DDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEY

AT5G12310.1 RING/U-box superfamily protein1.3e-0541.18Show/hide
Query:  GETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKR--SCPLCNAQFD
        G  C ICL  +  +  A++  C HAYCV CI +W++ K   +CP C   FD
Subjt:  GETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKR--SCPLCNAQFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTTGGAGCCGAGAACCGGCGCGAAAGTTCAACGGCGAAAGCTTTGTGTCGAAGGTAATTTCGCCGGCGATCTGCGGAGAAACTTGCCCGATTTGCCTCACAAA
GTTGGAGGATCGTACCGCCGCCGTGCTCACAACGTGTATCCACGCCTATTGCGTAGCTTGCATCCGCAAATGGAGCAATCTGAAGCGTTCTTGCCCTCTCTGCAACGCTC
AATTCGATTCTTGGTTCTGCAAAATCAGTCTCTCATCGCGAACCTTCCGCAAAGAACGACTGCCGCCTTTGGATTCTGCCGATAAGCTCAAGATTGGAGTTGGATCCTCC
CGAAACGACGCTCGCGGGGTTCTTCAGAGTACGAGGAATGAATTGTATAGAAATAGACGATCAGAAAGAACATTGACATGGCGGCGATTCTTTGAACGACGGCGAGGGCG
GGAATCTGTACCTGCTGATGTTATTGCCCAGAGAAAACTTCAATGGCGAGCTAGCATTTACGATCGACGTGTGCAAGCTGTTCCATCTTCGGTCGGATCATGTTCAGGAC
TGAACATAACAGGAGGCCATGGAGCAAAAGAAGCAATGCTAGAGAGGATTAAACCATGGATACATAGAGAGTTGCAGGCCATTCTTGAGGACCCAGATCCAATTATAATT
GTTCATTTGGTCACAACACTATTTGTCGCAACACTCGAAGCTCCTTCCTCACAGCTTAACTCTGAAGATGACTATCTTTTGACTTTGCGTTCCTTCCTCTACGAGAAAAC
TGAATTGTTTTGGCATGAATTAAGATGTTTTGCAGGAAGTTCGTTGCGCTTGGAAGTGTATGATTCAGTGGTTGAATATGTACCTTGGATTAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTGACAAGAAAAATCATGAAACCTTGGAGCCGAGAACCGGCGCGAAAGTTCAACGGCGAAAGCTTTGTGTCGAAGGTAATTTCGCCGGCGATCTGCGGAGAAACTTGCC
CGATTTGCCTCACAAAGTTGGAGGATCGTACCGCCGCCGTGCTCACAACGTGTATCCACGCCTATTGCGTAGCTTGCATCCGCAAATGGAGCAATCTGAAGCGTTCTTGC
CCTCTCTGCAACGCTCAATTCGATTCTTGGTTCTGCAAAATCAGTCTCTCATCGCGAACCTTCCGCAAAGAACGACTGCCGCCTTTGGATTCTGCCGATAAGCTCAAGAT
TGGAGTTGGATCCTCCCGAAACGACGCTCGCGGGGTTCTTCAGAGTACGAGGAATGAATTGTATAGAAATAGACGATCAGAAAGAACATTGACATGGCGGCGATTCTTTG
AACGACGGCGAGGGCGGGAATCTGTACCTGCTGATGTTATTGCCCAGAGAAAACTTCAATGGCGAGCTAGCATTTACGATCGACGTGTGCAAGCTGTTCCATCTTCGGTC
GGATCATGTTCAGGACTGAACATAACAGGAGGCCATGGAGCAAAAGAAGCAATGCTAGAGAGGATTAAACCATGGATACATAGAGAGTTGCAGGCCATTCTTGAGGACCC
AGATCCAATTATAATTGTTCATTTGGTCACAACACTATTTGTCGCAACACTCGAAGCTCCTTCCTCACAGCTTAACTCTGAAGATGACTATCTTTTGACTTTGCGTTCCT
TCCTCTACGAGAAAACTGAATTGTTTTGGCATGAATTAAGATGTTTTGCAGGAAGTTCGTTGCGCTTGGAAGTGTATGATTCAGTGGTTGAATATGTACCTTGGATTAAT
TGAAGAGAAGATTATTCTTGAAGAGATATTTTATACTCATATTTGAAGTGAGTGCATTGATGCAATTTCAGATTCTTTCATTGGCCTGAATGAAAGAACCATGATGTAAG
ACAAGATATATTCTGCTACCTAGGATTTCATATGCAGTTTGGGTGTATTAGTTTGATGCATCTCTCCCCACGCATCGCTGATCGCTCAACATTGCTCGATGGTCACCATT
CAACCTGTGAATCATTTAAAGGGAAGACTGTTTGAGGTTCTCTCTGATTGTGAAATGATCTCTCTAACAACATATGTATTGGAGTTGTTGCTCGATCGAATCGTATATTC
AGCCCAGGATCTGTTATAAGCTTTGAATGGAAGCTCCAGTAAACAGCGGCAGTAACTCTTAACTGTCCTAAAGTAGCGAAATTCCTTGTCGCTTAAGTAGCAACCTGCAC
GCCACTGCTCTGCTGCTTACGACATGGAACCGGTGAAATTGAAATCTCCGGGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCTGTGCATCTAACTGTAGCTAAT
GACAATCTTGATGGAGTGTGTAGGATAAGGAAAGAAACTTGTAAACAGAGTTGCTGCACCATACAAAGTGGAATGAGAGGCACACTAAGGAGAGTTGGAAATTGAAGGTT
ACTATAATATTAATTGGTAATGTCAATACTTTTTATTTATTTTTCACCCAAAATCCTCTTATTACAAATGATGTAATTTCTTCATTGTGTTGATTACATTCTATGGGCTC
TGTATTTATTCAAACATTTTTAGAGCATTAATGAGTTGGATTGTTGAAGGGTAATTAGGAAGCGAAATTTAGAGAAG
Protein sequenceShow/hide protein sequence
MKPWSREPARKFNGESFVSKVISPAICGETCPICLTKLEDRTAAVLTTCIHAYCVACIRKWSNLKRSCPLCNAQFDSWFCKISLSSRTFRKERLPPLDSADKLKIGVGSS
RNDARGVLQSTRNELYRNRRSERTLTWRRFFERRRGRESVPADVIAQRKLQWRASIYDRRVQAVPSSVGSCSGLNITGGHGAKEAMLERIKPWIHRELQAILEDPDPIII
VHLVTTLFVATLEAPSSQLNSEDDYLLTLRSFLYEKTELFWHELRCFAGSSLRLEVYDSVVEYVPWIN