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Sed0017035 (gene) of Chayote v1 genome

Gene IDSed0017035
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:22903294..22903746
RNA-Seq ExpressionSed0017035
SyntenySed0017035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064422.1 hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa]1.6e-0550.72Show/hide
Query:  MLVSLHFLSVEGRVLKS--------VGKMEALEPIGME---GYMAKVDDSFRSFSFVLSSGPSKKGPGH
        M+ S HFL VEGRVL+S          KME ++P+ M+      +    SFRS SFVL+SGPSKKGPGH
Subjt:  MLVSLHFLSVEGRVLKS--------VGKMEALEPIGME---GYMAKVDDSFRSFSFVLSSGPSKKGPGH

KAG6591405.1 hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0747.37Show/hide
Query:  MAIKLSTT---KTLCFVV---FMLVSLHFLSVEGRVLKSVG--------KMEALEPIGMEGYMAKVD-------DSFRSFSFVLSSGPSKKGPGH
        MA+++S T   K LCFVV    M+ S HFL+VEGR L+SV         KM  +E IG+  +  +V+         FRS SFVL+SGPSKKGPGH
Subjt:  MAIKLSTT---KTLCFVV---FMLVSLHFLSVEGRVLKSVG--------KMEALEPIGMEGYMAKVD-------DSFRSFSFVLSSGPSKKGPGH

KAG6608443.1 hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0954.02Show/hide
Query:  MAIKLSTT---KTLCFVV---FMLVSLHFLSVEGRVLKSVGKMEALEPIGMEGYMAKVD-------DSFRSFSFVLSSGPSKKGPGH
        MA++L  T   + LCFVV    M+V   F+SVEGRVLK V     +EPIGM  YMA +D        +F S SFVLSSGPSKKGPGH
Subjt:  MAIKLSTT---KTLCFVV---FMLVSLHFLSVEGRVLKSVGKMEALEPIGMEGYMAKVD-------DSFRSFSFVLSSGPSKKGPGH

KGN55240.1 hypothetical protein Csa_012906 [Cucumis sativus]1.3e-0750.56Show/hide
Query:  MAIKLSTTKTLCFVV---FMLVSLHFLSVEGRVLKS--------VGKMEALEPIGM----EGYMAKVDDSFRSFSFVLSSGPSKKGPGH
        MA+KLS TK++CFVV    M+ S HFL VEGRVL+S          +ME ++PI +        +    SFRS SFVL+SGPSKKGPGH
Subjt:  MAIKLSTTKTLCFVV---FMLVSLHFLSVEGRVLKS--------VGKMEALEPIGM----EGYMAKVDDSFRSFSFVLSSGPSKKGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0KZV6 Uncharacterized protein6.4e-0850.56Show/hide
Query:  MAIKLSTTKTLCFVV---FMLVSLHFLSVEGRVLKS--------VGKMEALEPIGM----EGYMAKVDDSFRSFSFVLSSGPSKKGPGH
        MA+KLS TK++CFVV    M+ S HFL VEGRVL+S          +ME ++PI +        +    SFRS SFVL+SGPSKKGPGH
Subjt:  MAIKLSTTKTLCFVV---FMLVSLHFLSVEGRVLKS--------VGKMEALEPIGM----EGYMAKVDDSFRSFSFVLSSGPSKKGPGH

A0A5D3D9C4 Uncharacterized protein7.8e-0650.72Show/hide
Query:  MLVSLHFLSVEGRVLKS--------VGKMEALEPIGME---GYMAKVDDSFRSFSFVLSSGPSKKGPGH
        M+ S HFL VEGRVL+S          KME ++P+ M+      +    SFRS SFVL+SGPSKKGPGH
Subjt:  MLVSLHFLSVEGRVLKS--------VGKMEALEPIGME---GYMAKVDDSFRSFSFVLSSGPSKKGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCAAATTGAGCACCACCAAAACTCTCTGTTTTGTTGTGTTCATGCTGGTTTCTCTGCATTTTCTAAGTGTGGAAGGCAGAGTTCTCAAATCTGTTGGGAAAAT
GGAAGCTTTGGAGCCAATTGGAATGGAAGGTTATATGGCCAAAGTTGATGATTCATTTAGAAGCTTCAGTTTTGTGTTGTCATCTGGGCCTAGTAAAAAAGGTCCTGGCC
ATTGA
mRNA sequenceShow/hide mRNA sequence
ACCGTCCCAATTTTTCAGTATCCAAATTCAACTGATACTCTCTCCCTTCCTTATATATACACATTCCAAATTCTGATACTCAAAACTCACAAACTTATCAGCTCAAAACC
ACAAGAACAAGTAGCTTTGATATCAATGGCAATCAAATTGAGCACCACCAAAACTCTCTGTTTTGTTGTGTTCATGCTGGTTTCTCTGCATTTTCTAAGTGTGGAAGGCA
GAGTTCTCAAATCTGTTGGGAAAATGGAAGCTTTGGAGCCAATTGGAATGGAAGGTTATATGGCCAAAGTTGATGATTCATTTAGAAGCTTCAGTTTTGTGTTGTCATCT
GGGCCTAGTAAAAAAGGTCCTGGCCATTGACCCTTTTTTTCTTTTTTTGCCTGTTTATTCTTCATTGTCGTGCATAATTCTGCGTGGAAATTTGAACTTTTTGTGTTAGA
TATAGCGAGGGAG
Protein sequenceShow/hide protein sequence
MAIKLSTTKTLCFVVFMLVSLHFLSVEGRVLKSVGKMEALEPIGMEGYMAKVDDSFRSFSFVLSSGPSKKGPGH