; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017038 (gene) of Chayote v1 genome

Gene IDSed0017038
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L27
Genome locationLG03:4354481..4356175
RNA-Seq ExpressionSed0017038
SyntenySed0017038
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR001684 - Ribosomal protein L27
IPR018261 - Ribosomal protein L27, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015950.1 50S ribosomal protein L27, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-8991.53Show/hide
Query:  VSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHA
        V+AMS NLIG+FRGLSL SSSSSS F KGDFGS+Q P K SVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHA
Subjt:  VSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHA

Query:  GKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        GKNVGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLASTDATETNPVC
Subjt:  GKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

XP_022133707.1 50S ribosomal protein L27, chloroplastic [Momordica charantia]3.0e-8889.53Show/hide
Query:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF
        M V+AMS NL+G+FRGLSLVSSSSSS F +GDF S+Q P KFS+SFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQLAKPGSIIVRQRGTKF
Subjt:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF

Query:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        HAGKNVGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLAS+DATETNPVC
Subjt:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

XP_022939083.1 50S ribosomal protein L27, chloroplastic [Cucurbita moschata]7.4e-8790.86Show/hide
Query:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN
        MS NLIG+FRGLSL  SSSSS F KGDFGS+Q P K SVSFP RFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHAGKN
Subjt:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        VGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLASTDATETNPVC
Subjt:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

XP_022993762.1 50S ribosomal protein L27, chloroplastic [Cucurbita maxima]1.1e-8791.4Show/hide
Query:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN
        MS NLIG+FRGLSL SSSSSS F KGDFGS+Q P K SVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHAGKN
Subjt:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        VGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +++PQLVLASTDATETNPVC
Subjt:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

XP_023550670.1 50S ribosomal protein L27, chloroplastic [Cucurbita pepo subsp. pepo]3.9e-8891.94Show/hide
Query:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN
        MS NLIG+FRGLSL SSSSSS F KGDFGS+Q P K SVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHAGKN
Subjt:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        VGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLASTDATETNPVC
Subjt:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

TrEMBL top hitse value%identityAlignment
A0A6J1BXH1 50S ribosomal protein L27, chloroplastic1.5e-8889.53Show/hide
Query:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF
        M V+AMS NL+G+FRGLSLVSSSSSS F +GDF S+Q P KFS+SFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKI+GDQLAKPGSIIVRQRGTKF
Subjt:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF

Query:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        HAGKNVGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLAS+DATETNPVC
Subjt:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

A0A6J1E4G2 50S ribosomal protein L27, chloroplastic-like6.8e-8687.89Show/hide
Query:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF
        M V+AM+ NL+G+FRGLSLVSSSSSS F KGDFGS+Q P   SVSFPNRFPLTIE+AHKKGAGSTKNGRDSKGQRLGVKI+GDQ+AKPGSIIVRQRGTKF
Subjt:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF

Query:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPV
        HAGKNVGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG+VA+ QLVLASTDA ETNP+
Subjt:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPV

A0A6J1FG23 50S ribosomal protein L27, chloroplastic3.6e-8790.86Show/hide
Query:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN
        MS NLIG+FRGLSL  SSSSS F KGDFGS+Q P K SVSFP RFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHAGKN
Subjt:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        VGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +A+PQLVLASTDATETNPVC
Subjt:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

A0A6J1JNS6 50S ribosomal protein L27, chloroplastic-like2.3e-8687.43Show/hide
Query:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF
        M V+AMS NL+G+FRGLSLVSSSSSS F KGDFGS+Q P   SVSFPNRFPLTIE+AHKKGAGSTKNGRDSKGQRLGVKI+GDQ+AKPGSIIVRQRGTKF
Subjt:  MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKF

Query:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        HAGKNVGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG+VA+ QL+LASTDA  TNP+C
Subjt:  HAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

A0A6J1K388 50S ribosomal protein L27, chloroplastic5.5e-8891.4Show/hide
Query:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN
        MS NLIG+FRGLSL SSSSSS F KGDFGS+Q P K SVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPGSIIVRQRGTKFHAGKN
Subjt:  MSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKN

Query:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC
        VGLGKDHT+FSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKA KEG +++PQLVLASTDATETNPVC
Subjt:  VGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC

SwissProt top hitse value%identityAlignment
A6Q4D3 50S ribosomal protein L271.6e-2869.05Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPRE
        AHKKG GST+N RDS G+RLGVK +G +  + G+II+RQRGTK H G NVGLGKDHT+F+LIDG+VKFE+YG D++KVSVYP E
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPRE

O65037 50S ribosomal protein L27, chloroplastic5.9e-6368.37Show/hide
Query:  VSAMSFNLIGSFRGLSLVS---SSSSSCFLKGDFGSLQTPSKFSVSFPNRFP---LTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQR
        +++M+F L+G+F+G+SL S   SSSS+ FL+ D  SL       +  P   P   LTI+ AHKKGAGSTKNGRDS GQRLGVKIYGDQ+AKPG+II+RQR
Subjt:  VSAMSFNLIGSFRGLSLVS---SSSSSCFLKGDFGSLQTPSKFSVSFPNRFP---LTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQR

Query:  GTKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTD-ATETNPVC
        GT+ + G NVG+GKDHTLFSLIDGLVKFEKYGPDKKKVSVYP E QPENPNSYRARKREYFR+QRERKKA  EGIV E QLVLA+ D + E N  C
Subjt:  GTKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTD-ATETNPVC

P30155 50S ribosomal protein L27, chloroplastic4.2e-6978.36Show/hide
Query:  AMSFNLIGSFRGLSLVSSSSSSCFLKGDFG-SLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAG
        A+SF+L+G+F+GLSL SSSS   FLKGDFG +     KFSVSFP + PLTIE+AHKKGAGSTKNGRDS GQRLGVKI+GDQ+AKPGSIIVRQRGTKFH G
Subjt:  AMSFNLIGSFRGLSLVSSSSSSCFLKGDFG-SLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAG

Query:  KNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAE
        KNVGLGKDHT+FSLIDGLVKFEK+GPD+KK+SVYPREVQPENPNSYR RKRE FRLQRER+KA +EG++ +
Subjt:  KNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAE

P82190 50S ribosomal protein L27, chloroplastic2.4e-7275.51Show/hide
Query:  MAV-SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFG--SLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRG
        MAV ++MSFNL+ SFRG+SL SSSSSS F KG+FG  SL+ P+K  +S  + FPLTIE+AHKKGAGSTKNGRDSKGQRLGVKIYGDQ+AKPG+II+RQRG
Subjt:  MAV-SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFG--SLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRG

Query:  TKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLAS--TDATETNPVC
        TKFH GKNVG+GKDHT+F+LIDGLVKFEKYGPDKKKVSVYPRE+QPENPNSYRARKRE FRLQRE+KKA +EG   +PQL+LAS  TD  + + VC
Subjt:  TKFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLAS--TDATETNPVC

Q9FLN4 50S ribosomal protein L27, chloroplastic9.8e-6669.19Show/hide
Query:  SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNR-----FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGT
        ++MS NLIG+F+GLSL   SS+S FL+GD  S    + F+V+ P        PLTIE+AHKKGAGSTKNGRDS GQRLGVKIYGDQ+AKPG+IIVRQRGT
Subjt:  SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNR-----FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGT

Query:  KFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEG---IVAEPQLVL--ASTDATETNPVC
        KFHAGKNVG+GKDHT+FSLIDGLVKFEK+GPD+KK+SVYPRE+ PENPNSYRARKRE FRLQRE+KKA +E     +  P+LVL  AS D  E NP C
Subjt:  KFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEG---IVAEPQLVL--ASTDATETNPVC

Arabidopsis top hitse value%identityAlignment
AT2G16930.1 Ribosomal protein L27 family protein2.4e-1965.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK +G +   PG+IIVRQRGT+FH G  VG+GKDHTLF+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK

AT2G16930.2 Ribosomal protein L27 family protein2.4e-1965.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK +G +   PG+IIVRQRGT+FH G  VG+GKDHTLF+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK

AT2G16930.3 Ribosomal protein L27 family protein2.4e-1965.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK +G +   PG+IIVRQRGT+FH G  VG+GKDHTLF+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK

AT5G15220.1 Ribosomal protein L27 family protein2.4e-1965.71Show/hide
Query:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK
        A KK AGSTKNGRDS  + LGVK +G +   PG+IIVRQRGT+FH G  VG+GKDHTLF+L +G V+FEK
Subjt:  AHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGKDHTLFSLIDGLVKFEK

AT5G40950.1 ribosomal protein large subunit 277.0e-6769.19Show/hide
Query:  SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNR-----FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGT
        ++MS NLIG+F+GLSL   SS+S FL+GD  S    + F+V+ P        PLTIE+AHKKGAGSTKNGRDS GQRLGVKIYGDQ+AKPG+IIVRQRGT
Subjt:  SAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNR-----FPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGT

Query:  KFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEG---IVAEPQLVL--ASTDATETNPVC
        KFHAGKNVG+GKDHT+FSLIDGLVKFEK+GPD+KK+SVYPRE+ PENPNSYRARKRE FRLQRE+KKA +E     +  P+LVL  AS D  E NP C
Subjt:  KFHAGKNVGLGKDHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEG---IVAEPQLVL--ASTDATETNPVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAGCCATGAGTTTTAACCTAATCGGCTCATTCAGAGGCCTTTCTCTGGTTTCTTCTTCTTCTTCTTCTTGTTTCTTGAAGGGCGATTTCGGTTCCCTTCA
AACCCCTTCCAAATTCTCCGTCTCTTTCCCCAACCGATTCCCTTTAACCATCGAAAATGCCCACAAAAAGGGAGCTGGAAGCACCAAGAATGGCCGAGATTCCAAGGGCC
AGAGGCTCGGCGTCAAAATCTACGGCGATCAACTCGCCAAACCCGGTTCCATCATCGTCCGTCAGCGCGGAACCAAGTTTCATGCTGGAAAGAATGTGGGGCTTGGCAAG
GATCATACCCTTTTCTCATTGATTGACGGGCTTGTAAAGTTCGAGAAGTATGGACCTGATAAGAAAAAGGTGAGTGTCTACCCAAGAGAAGTGCAGCCTGAGAATCCAAA
CAGCTACAGAGCAAGGAAGAGGGAGTATTTCAGGCTGCAAAGAGAGCGCAAGAAAGCAATAAAGGAAGGCATTGTTGCTGAACCCCAATTAGTATTAGCTTCTACTGATG
CTACAGAAACCAACCCAGTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
AGAGATCTAAAATGTGAGAAATTCAATGTAGTTCTCCATTTTATATGACCGAAACTTTTTTCCCATAAAAATAAGGAATAGACAAAATTTGAAAGTAAAAAAAAAAAAGA
AGAAATTTGGATATTAGAGTAAAATTGTGGGGGGTGTGGTTGTAAGGGCACTGAGATAAGGTTCGCATATTCTCAATCTTCATTCATCTTCTTCGCTTCAAAGATTTCTC
GAAAATGGCAGTTTCAGCCATGAGTTTTAACCTAATCGGCTCATTCAGAGGCCTTTCTCTGGTTTCTTCTTCTTCTTCTTCTTGTTTCTTGAAGGGCGATTTCGGTTCCC
TTCAAACCCCTTCCAAATTCTCCGTCTCTTTCCCCAACCGATTCCCTTTAACCATCGAAAATGCCCACAAAAAGGGAGCTGGAAGCACCAAGAATGGCCGAGATTCCAAG
GGCCAGAGGCTCGGCGTCAAAATCTACGGCGATCAACTCGCCAAACCCGGTTCCATCATCGTCCGTCAGCGCGGAACCAAGTTTCATGCTGGAAAGAATGTGGGGCTTGG
CAAGGATCATACCCTTTTCTCATTGATTGACGGGCTTGTAAAGTTCGAGAAGTATGGACCTGATAAGAAAAAGGTGAGTGTCTACCCAAGAGAAGTGCAGCCTGAGAATC
CAAACAGCTACAGAGCAAGGAAGAGGGAGTATTTCAGGCTGCAAAGAGAGCGCAAGAAAGCAATAAAGGAAGGCATTGTTGCTGAACCCCAATTAGTATTAGCTTCTACT
GATGCTACAGAAACCAACCCAGTTTGCTGATTTCCAATACCAGCACTTCAATTGCTTCTTGTTTAAAAGCTATGATCTTGCAGGAAGAAGGTCTGCTTCACTAGCTTCCC
TCTCCTTTAGTGCACATATAATTTGCTGGATTCTTTACAGGAACATGTTTATTAATGATTCTCATTTGCCAATGTTTGCTTGTTCTGCTTCTTGTCTTGAGAGATTTTCT
GTAACATTCATAGCTTGTTTTGGAAATACCTGAGATGACACAACTGTCACTCTATTTTGTTGATGAATTTTCTGTTGAAATGGGATTCAATGAATTAGATGAGTTCGGTT
GCCCTTGCCCCTGCCTTGTATAAACACAAATAGAC
Protein sequenceShow/hide protein sequence
MAVSAMSFNLIGSFRGLSLVSSSSSSCFLKGDFGSLQTPSKFSVSFPNRFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIYGDQLAKPGSIIVRQRGTKFHAGKNVGLGK
DHTLFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKAIKEGIVAEPQLVLASTDATETNPVC