; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017040 (gene) of Chayote v1 genome

Gene IDSed0017040
OrganismSechium edule (Chayote v1)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationLG13:23420974..23422276
RNA-Seq ExpressionSed0017040
SyntenySed0017040
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591452.1 Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia]4.0e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF  TIQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

XP_022937190.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]6.8e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF  TIQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

XP_022977064.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]3.1e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF Q IQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

XP_023536445.1 zinc finger CCCH domain-containing protein 23-like [Cucurbita pepo subsp. pepo]4.0e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF  TIQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

XP_038900024.1 zinc finger CCCH domain-containing protein 23-like [Benincasa hispida]2.0e-10157.91Show/hide
Query:  MIGEHSRFHQTIQIPQWDPLAG-----------------------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA
        MIGE SRF+ TIQ+P WDPL                               +PS+AD                DHF MFEFKIR+CARGRSHDWT+CPYA
Subjt:  MIGEHSRFHQTIQIPQWDPLAG-----------------------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA

Query:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------
        H GEKARRRDP+K  YSG ACPEFRKGNCKKGDSCD AHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH+P+QLR+        P+S D +       
Subjt:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------

Query:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFG-VQL-GRNLGSPAGGGFYSFPASPTTGNYELW
                  S +TSPTSILS P +    DSPP+SP      F+SMN LVS M +L++ K K    +G +QL G+N  SP+G G YS P++PTTGNYELW
Subjt:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFG-VQL-GRNLGSPAGGGFYSFPASPTTGNYELW

Query:  GKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
        GK Y EEEP MERVESG++LRAKMY KLSKDNSV+  VDST TPDVGW+SELLM
Subjt:  GKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

TrEMBL top hitse value%identityAlignment
A0A1S3BTV6 zinc finger CCCH domain-containing protein 20-like1.9e-10057.75Show/hide
Query:  MIGEHSRFHQTIQIPQWDPL--------------AG---------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA
        MIGE SRF+ TIQ+P WDPL              AG               +PS+AD                DHF MFEFKIR+CARGRSHDWT+CPYA
Subjt:  MIGEHSRFHQTIQIPQWDPL--------------AG---------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA

Query:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------
        H GEKARRRDP+K  YSG ACPEFRKGNCKKGDSCD AHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH+P+QLR+        P+S D +       
Subjt:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------

Query:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQF--GVQLG-RNLGSPAGGGFYSFPASPTTGNYEL
                  S +TSPTSILS P +    DSPP+SP      F+SMN LVS M +L++ KLK        +QLG +N  SP+G G Y+ P++PTTGNYEL
Subjt:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQF--GVQLG-RNLGSPAGGGFYSFPASPTTGNYEL

Query:  WGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
        WGK Y EEEP MERVESG++LRA+MY KLSKDNSV+  +DSTLTPDVGW+SELLM
Subjt:  WGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

A0A5D3D9C0 Zinc finger CCCH domain-containing protein 20-like1.9e-10057.75Show/hide
Query:  MIGEHSRFHQTIQIPQWDPL--------------AG---------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA
        MIGE SRF+ TIQ+P WDPL              AG               +PS+AD                DHF MFEFKIR+CARGRSHDWT+CPYA
Subjt:  MIGEHSRFHQTIQIPQWDPL--------------AG---------------IPSSADD---------------DHFHMFEFKIRKCARGRSHDWTDCPYA

Query:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------
        H GEKARRRDP+K  YSG ACPEFRKGNCKKGDSCD AHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH+P+QLR+        P+S D +       
Subjt:  HSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI-------PPLSGDPMT------

Query:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQF--GVQLG-RNLGSPAGGGFYSFPASPTTGNYEL
                  S +TSPTSILS P +    DSPP+SP      F+SMN LVS M +L++ KLK        +QLG +N  SP+G G Y+ P++PTTGNYEL
Subjt:  ----------SILTSPTSILSNPLL----DSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQF--GVQLG-RNLGSPAGGGFYSFPASPTTGNYEL

Query:  WGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
        WGK Y EEEP MERVESG++LRA+MY KLSKDNSV+  +DSTLTPDVGW+SELLM
Subjt:  WGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

A0A6J1CEX8 zinc finger CCCH domain-containing protein 23-like9.9e-10258.12Show/hide
Query:  MIGEHSRFHQTIQIPQWDPL--------------AGIPSSADD---------------------------------DHFHMFEFKIRKCARGRSHDWTDC
        MI E +RF+ TI++PQWDPL              AG+ S+  D                                 DHF MFEFKIR+CARGRSHDWT+C
Subjt:  MIGEHSRFHQTIQIPQWDPL--------------AGIPSSADD---------------------------------DHFHMFEFKIRKCARGRSHDWTDC

Query:  PYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI---PPLSGDPM--------
        PYAH GEKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAHSP+QLR+    P+S D +        
Subjt:  PYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRI---PPLSGDPM--------

Query:  --------TSILTSPTSILSNPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGG--GFYSFPASPTTGNYELWGK
                 S +TSPTSILS P  DSPP+S   P++ GG F+SMN +V+SM  L+I K K   Q+GVQ+ + L SP+GG  GFYS P +PTTG YELWGK
Subjt:  --------TSILTSPTSILSNPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGG--GFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELL
         Y  EEP MERVESG++LRAKMY KLSKDNSVE      LTPDVGW+SELL
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELL

A0A6J1FFV8 zinc finger CCCH domain-containing protein 20-like3.3e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF  TIQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

A0A6J1IQE6 zinc finger CCCH domain-containing protein 20-like1.5e-10559.09Show/hide
Query:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG
        MIGE SRF Q IQ+P WDP              + G               +PS+AD             DHF MFEFKIR+CARGRSHDWT+CPYAH G
Subjt:  MIGEHSRFHQTIQIPQWDP--------------LAG---------------IPSSADD------------DHFHMFEFKIRKCARGRSHDWTDCPYAHSG

Query:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----
        EKARRRDP+K  YSG ACPEFRKGNCKKGDSCDLAHGIFECWLHP RYRTQPCKDGLACRRRVCFFAH P+QLR+ P            + G P      
Subjt:  EKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSPDQLRIPP------------LSGDPMT----

Query:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK
               S++TSPTSI+S    +P  DSPP+S   P+L GG F+SM +L SS   L+I K K    +G+QLG+NL SP+G GFYS P++PTTG YELWGK
Subjt:  -------SILTSPTSILS----NPLLDSPPIS---PKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPTTGNYELWGK

Query:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM
         Y EEEP MERVESG++LRAKMY KLSKDNSV+ A DST TPDVGW+SELLM
Subjt:  IYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 202.0e-7552.15Show/hide
Query:  PQWDPLAGIPSSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQ
        P  DP    P S  D    DHF M+EFK+R+CARGRSHDWT+CPYAH GEKARRRDP+K  YSG ACPEFRKG CK+GD+C+ +HG+FECWLHP RYRTQ
Subjt:  PQWDPLAGIPSSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQ

Query:  PCKDGLACRRRVCFFAHSPDQLRI-PPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK---------LAGGLFHSM-NRLVSSMGSLEIEKLK--
        PCKDG  CRRRVCFFAHSPDQ+R+ P  S D + S  + SPT         +P  +SPP+SP+         L+  L  ++ N +V+S+ +L++ K+K  
Subjt:  PCKDGLACRRRVCFFAHSPDQLRI-PPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK---------LAGGLFHSM-NRLVSSMGSLEIEKLK--

Query:  LISQFGVQL---GRNLGSPAGG----GFYSFPASPT-TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDN---SVEPAVDSTL--TPDVGWISE
        L S +  Q+   G   GSP G     GF S P +PT  G   +W     EEEP MERVESG+ LRA+++EKLSK+N    +EP  D     TPDVGW+S+
Subjt:  LISQFGVQL---GRNLGSPAGG----GFYSFPASPT-TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDN---SVEPAVDSTL--TPDVGWISE

Query:  LLM
        L+M
Subjt:  LLM

O82307 Zinc finger CCCH domain-containing protein 235.5e-6550.4Show/hide
Query:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA
        D  + +  S   D F ++EFKIR+CARGRSHDWT+CP+AH GEKARRRDP+K  YSG ACPEFRKG+C++GDSC+ +HG+FECWLHP+RYRTQPCKDG +
Subjt:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA

Query:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-
        CRRR+CFFAH+ +QLR+ P S DP     + + TSPTSIL +P    P  SP L+     S   L++SM  +++             G +  SP      
Subjt:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-

Query:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV
          F +S        W +I E   EE P ME VESGK LRA+MY +LS++NS+
Subjt:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV

Q6L4N4 Zinc finger CCCH domain-containing protein 352.3e-6344.48Show/hide
Query:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP
        D F M+EFK+R+CARGRSHDWT+CP+AH GEKARRRDP++  YSG ACP+FRKG CK+GD+C+ AHG+FECWLHP RYRTQPCKDG ACRRRVCFFAH+P
Subjt:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP

Query:  DQLRIPPLS----------------------------GDPM-----TSILT------SPTSIL----SNPLLDSPPISPKLAGGLFHSMNRLVSSMGS--
        DQLR+ P S                            G P+      S LT      SPTS L     +P  +SPP+SP  AG L       V S  +  
Subjt:  DQLRIPPLS----------------------------GDPM-----TSILT------SPTSIL----SNPLLDSPPISPKLAGGLFHSMNRLVSSMGS--

Query:  -LEIEKLKLISQFG-------VQLGRNLGSP------AGGGFYSFPASPT-------------TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSK
         + + +L+L S          +  G   GSP      A    YS P++PT             T   E       EEE  MERVESG+ LR K++E+LSK
Subjt:  -LEIEKLKLISQFG-------VQLGRNLGSP------AGGGFYSFPASPT-------------TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSK

Query:  DNSVE---PAVDSTLTPDVGWISELL
        + +V     A  + + PDVGW+S+L+
Subjt:  DNSVE---PAVDSTLTPDVGWISELL

Q9FU27 Zinc finger CCCH domain-containing protein 23.0e-6345.19Show/hide
Query:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP
        D F M+EFK+R+CARGRSHDWT+CP+AH GEKARRRDP+K  YSG ACP+FRKG CK+GD+C+ AHG+FECWLHP RYRTQPCKDG ACRRRVCFFAH+P
Subjt:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP

Query:  DQLRIPP-----------------LSGDPM-----------TSILTSPTSIL----SNPLLDSPPISPKLAG--------GLFHSMNRLVSSMGSLEIEK
        DQLR+ P                   G P+           T + +SPTS L     +P  +SPP+SP  A         G+   +N +++S   L + K
Subjt:  DQLRIPP-----------------LSGDPM-----------TSILTSPTSIL----SNPLLDSPPISPKLAG--------GLFHSMNRLVSSMGSLEIEK

Query:  LKLISQFGVQLGRN---LGSP-AGGGFYSFPASP-------TTG-----NYE-LWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTP-
        +K     G     +    GSP A  G YS P +P       TT      N E L   +  +EEPV +RVESG+ LR K++E+LS+D ++     +  T  
Subjt:  LKLISQFGVQLGRN---LGSP-AGGGFYSFPASP-------TTG-----NYE-LWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTP-

Query:  ---DVGWISELL
           DV W+S+L+
Subjt:  ---DVGWISELL

Q9M0G2 Zinc finger CCCH domain-containing protein 497.4e-7052.13Show/hide
Query:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP
        DHF M++FK+R+CARGRSHDWT+CPYAH GEKARRRDP+K  YSG ACP+FRKG CKKGDSC+ AHG+FECWLHP RYRTQPCKDG  C R++CFFAHSP
Subjt:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP

Query:  DQLR-IPPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK-----------LAGGLFH-SMNRLVSSMGSLEIEKLKLISQ----FGVQLGRNLGS
        DQLR +   S D + S  ++SP       +  +P+  SPP+SP+           L+  L   S+N +V S  +L+   +K   +    FG   G   GS
Subjt:  DQLR-IPPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK-----------LAGGLFH-SMNRLVSSMGSLEIEKLKLISQ----FGVQLGRNLGS

Query:  PAGGGFYSFPASPT-TGNYELWGKIYEEEEPVMER-VESGKNLRAKMYEKLSKDNSV-----EPAVDSTLTPDVGWISELLM
          G GF S P +PT  GN ++W +   EEEPVMER VESG+ LR KM EKL K+N +     +P  +    PDVGW+S+LLM
Subjt:  PAGGGFYSFPASPT-TGNYELWGKIYEEEEPVMER-VESGKNLRAKMYEKLSKDNSV-----EPAVDSTLTPDVGWISELLM

Arabidopsis top hitse value%identityAlignment
AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.8e-5058.33Show/hide
Query:  SSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRK-GNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACR
        S +DD    DHF MFEFKIR+C R RSHDWTDCP+AH GEKARRRDP++ +YSGE CPEFR+ G+C +GD C+ AHG+FECWLHP RYRT+ CKDG  C+
Subjt:  SSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRK-GNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACR

Query:  RRVCFFAHSPDQLRIPPLSGDPMTSILTSPTSILSNP--LLDSPPISPKLAGGLFH
        R+VCFFAHSP QLR+ P   + ++ +  SP+    NP  L  S   +  L G L H
Subjt:  RRVCFFAHSPDQLRIPPLSGDPMTSILTSPTSILSNP--LLDSPPISPKLAGGLFH

AT2G19810.1 CCCH-type zinc finger family protein1.4e-7652.15Show/hide
Query:  PQWDPLAGIPSSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQ
        P  DP    P S  D    DHF M+EFK+R+CARGRSHDWT+CPYAH GEKARRRDP+K  YSG ACPEFRKG CK+GD+C+ +HG+FECWLHP RYRTQ
Subjt:  PQWDPLAGIPSSADD----DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQ

Query:  PCKDGLACRRRVCFFAHSPDQLRI-PPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK---------LAGGLFHSM-NRLVSSMGSLEIEKLK--
        PCKDG  CRRRVCFFAHSPDQ+R+ P  S D + S  + SPT         +P  +SPP+SP+         L+  L  ++ N +V+S+ +L++ K+K  
Subjt:  PCKDGLACRRRVCFFAHSPDQLRI-PPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK---------LAGGLFHSM-NRLVSSMGSLEIEKLK--

Query:  LISQFGVQL---GRNLGSPAGG----GFYSFPASPT-TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDN---SVEPAVDSTL--TPDVGWISE
        L S +  Q+   G   GSP G     GF S P +PT  G   +W     EEEP MERVESG+ LRA+++EKLSK+N    +EP  D     TPDVGW+S+
Subjt:  LISQFGVQL---GRNLGSPAGG----GFYSFPASPT-TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDN---SVEPAVDSTL--TPDVGWISE

Query:  LLM
        L+M
Subjt:  LLM

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.9e-6650.4Show/hide
Query:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA
        D  + +  S   D F ++EFKIR+CARGRSHDWT+CP+AH GEKARRRDP+K  YSG ACPEFRKG+C++GDSC+ +HG+FECWLHP+RYRTQPCKDG +
Subjt:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA

Query:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-
        CRRR+CFFAH+ +QLR+ P S DP     + + TSPTSIL +P    P  SP L+     S   L++SM  +++             G +  SP      
Subjt:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-

Query:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV
          F +S        W +I E   EE P ME VESGK LRA+MY +LS++NS+
Subjt:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein3.9e-6650.4Show/hide
Query:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA
        D  + +  S   D F ++EFKIR+CARGRSHDWT+CP+AH GEKARRRDP+K  YSG ACPEFRKG+C++GDSC+ +HG+FECWLHP+RYRTQPCKDG +
Subjt:  DPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLA

Query:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-
        CRRR+CFFAH+ +QLR+ P S DP     + + TSPTSIL +P    P  SP L+     S   L++SM  +++             G +  SP      
Subjt:  CRRRVCFFAHSPDQLRIPPLSGDP----MTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGF-

Query:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV
          F +S        W +I E   EE P ME VESGK LRA+MY +LS++NS+
Subjt:  YSFPASPTTGNYELWGKIYE---EEEPVMERVESGKNLRAKMYEKLSKDNSV

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein5.2e-7152.13Show/hide
Query:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP
        DHF M++FK+R+CARGRSHDWT+CPYAH GEKARRRDP+K  YSG ACP+FRKG CKKGDSC+ AHG+FECWLHP RYRTQPCKDG  C R++CFFAHSP
Subjt:  DHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQPCKDGLACRRRVCFFAHSP

Query:  DQLR-IPPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK-----------LAGGLFH-SMNRLVSSMGSLEIEKLKLISQ----FGVQLGRNLGS
        DQLR +   S D + S  ++SP       +  +P+  SPP+SP+           L+  L   S+N +V S  +L+   +K   +    FG   G   GS
Subjt:  DQLR-IPPLSGDPMTSI-LTSPT-----SILSNPLLDSPPISPK-----------LAGGLFH-SMNRLVSSMGSLEIEKLKLISQ----FGVQLGRNLGS

Query:  PAGGGFYSFPASPT-TGNYELWGKIYEEEEPVMER-VESGKNLRAKMYEKLSKDNSV-----EPAVDSTLTPDVGWISELLM
          G GF S P +PT  GN ++W +   EEEPVMER VESG+ LR KM EKL K+N +     +P  +    PDVGW+S+LLM
Subjt:  PAGGGFYSFPASPT-TGNYELWGKIYEEEEPVMER-VESGKNLRAKMYEKLSKDNSV-----EPAVDSTLTPDVGWISELLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCGAACATTCTAGATTTCATCAAACCATCCAAATCCCCCAATGGGACCCACTCGCCGGAATTCCCTCCTCCGCCGACGACGACCACTTCCACATGTTCGAGTT
CAAAATCCGCAAATGCGCACGTGGGAGGTCGCACGATTGGACCGACTGTCCCTACGCCCATTCCGGCGAGAAGGCTCGCCGCCGGGACCCCAAAAAGTGCCGCTACTCCG
GCGAGGCCTGCCCGGAGTTCCGAAAGGGGAACTGCAAGAAAGGCGATTCTTGCGATCTCGCTCACGGGATTTTCGAGTGTTGGCTCCACCCGACCCGCTACCGGACTCAG
CCGTGCAAGGACGGCCTCGCCTGCCGCCGCCGTGTCTGTTTCTTCGCCCACTCGCCGGACCAGCTCCGGATTCCGCCGCTTTCCGGTGACCCCATGACTTCAATTCTAAC
CTCGCCCACTTCGATTCTTTCAAACCCGCTGCTCGATTCGCCTCCGATTTCCCCGAAACTCGCCGGTGGGTTGTTTCATTCGATGAATCGGCTTGTTTCTTCAATGGGTA
GCCTTGAAATCGAGAAATTGAAATTAATTTCTCAATTCGGGGTTCAACTGGGCCGGAATTTGGGCTCTCCCGCCGGCGGCGGGTTCTACAGTTTCCCTGCGAGTCCGACC
ACCGGAAATTACGAACTATGGGGGAAAATTTACGAGGAAGAAGAACCTGTAATGGAAAGAGTGGAATCTGGGAAAAATCTACGAGCTAAAATGTATGAGAAATTAAGCAA
AGACAACTCGGTTGAGCCTGCCGTGGATTCGACATTGACGCCGGATGTTGGATGGATTTCGGAGTTATTGATGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAACCTAACCCTTCTGTTTCCCCCTTGGGTTTATATGTTCCCATCCAAATCCCCTTCTCTTCATTCACAAACCCCACCTCCCACTACCAAAAACAAAACATGATCGGC
GAACATTCTAGATTTCATCAAACCATCCAAATCCCCCAATGGGACCCACTCGCCGGAATTCCCTCCTCCGCCGACGACGACCACTTCCACATGTTCGAGTTCAAAATCCG
CAAATGCGCACGTGGGAGGTCGCACGATTGGACCGACTGTCCCTACGCCCATTCCGGCGAGAAGGCTCGCCGCCGGGACCCCAAAAAGTGCCGCTACTCCGGCGAGGCCT
GCCCGGAGTTCCGAAAGGGGAACTGCAAGAAAGGCGATTCTTGCGATCTCGCTCACGGGATTTTCGAGTGTTGGCTCCACCCGACCCGCTACCGGACTCAGCCGTGCAAG
GACGGCCTCGCCTGCCGCCGCCGTGTCTGTTTCTTCGCCCACTCGCCGGACCAGCTCCGGATTCCGCCGCTTTCCGGTGACCCCATGACTTCAATTCTAACCTCGCCCAC
TTCGATTCTTTCAAACCCGCTGCTCGATTCGCCTCCGATTTCCCCGAAACTCGCCGGTGGGTTGTTTCATTCGATGAATCGGCTTGTTTCTTCAATGGGTAGCCTTGAAA
TCGAGAAATTGAAATTAATTTCTCAATTCGGGGTTCAACTGGGCCGGAATTTGGGCTCTCCCGCCGGCGGCGGGTTCTACAGTTTCCCTGCGAGTCCGACCACCGGAAAT
TACGAACTATGGGGGAAAATTTACGAGGAAGAAGAACCTGTAATGGAAAGAGTGGAATCTGGGAAAAATCTACGAGCTAAAATGTATGAGAAATTAAGCAAAGACAACTC
GGTTGAGCCTGCCGTGGATTCGACATTGACGCCGGATGTTGGATGGATTTCGGAGTTATTGATGTGAAAAAGGGGGGAATCTTCATCGGATTGAAATCGGCGGCGTTTCG
GGTTTTTGATTGTGAATATGTATTTTGGAGGGTTTGTGTAAATTTGAAGGTTTTAATGGGGGGTTTTGATTTCTGAATTAACAGAGAGAAAATTGCTCTGTTTTTGCTCT
GTTTTTTCTGTACATATTGATAGACGGAATTTTAGGCCGCCGAAGTAGTTACATAAGAAGGTTGTAGTCGGTTGGGCTTTTCATTTAATTGAAACTTTCAATTGTAATTT
GTAATGATATTTTTCAAATTTTCTTTAAACTTTAATCTTCTGTTTAGCTGCATCAGACAATCAATTACTCTATGAAGTTGCAGGTTTATTTTT
Protein sequenceShow/hide protein sequence
MIGEHSRFHQTIQIPQWDPLAGIPSSADDDHFHMFEFKIRKCARGRSHDWTDCPYAHSGEKARRRDPKKCRYSGEACPEFRKGNCKKGDSCDLAHGIFECWLHPTRYRTQ
PCKDGLACRRRVCFFAHSPDQLRIPPLSGDPMTSILTSPTSILSNPLLDSPPISPKLAGGLFHSMNRLVSSMGSLEIEKLKLISQFGVQLGRNLGSPAGGGFYSFPASPT
TGNYELWGKIYEEEEPVMERVESGKNLRAKMYEKLSKDNSVEPAVDSTLTPDVGWISELLM