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Sed0017051 (gene) of Chayote v1 genome

Gene IDSed0017051
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG06:8733170..8737158
RNA-Seq ExpressionSed0017051
SyntenySed0017051
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010942698.1 serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]3.1e-1340.4Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVN
        E+ Y DRV+RQFG  Q +    DT++ LH  +LRGR ++DW     H +Q+WE+  + VI GA + G +D    Y +WY  I+RR+I ++GA ++ L++
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVN

XP_021727155.1 uncharacterized protein LOC110694286 [Chenopodium quinoa]1.3e-1138.28Show/hide
Query:  AYDPSILVYQATHRSNVAWKNIRVSALHCKRREAVLRREFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQG
        A  P +L +QA  RS V      V   H              PDRVMRQFG  Q V Q  DT+  LH  + RG+ +R+W    A ++ +W   L FV+ G
Subjt:  AYDPSILVYQATHRSNVAWKNIRVSALHCKRREAVLRREFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQG

Query:  AMIGGVVDVTHAYTEWYNAISRRYITQS
          I GV+D    Y EWY  I+RR+I  S
Subjt:  AMIGGVVDVTHAYTEWYNAISRRYITQS

XP_022152173.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica charantia]2.9e-1141Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI
        E+  PDRV+RQF   Q V    +T+  LH  +LRGR++ DW +  A ++  W         G +I    DV+  Y  WYN+I+RRYIT  GAAY  + NI
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI

XP_022159786.1 serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]6.3e-2246.28Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI
        E+  PDRVMRQFGW+Q +    +T++ LH+ +LRGRHER WV +LA  +  WEN  N +IQG  I    DV   Y  WY +I+RRYIT++GA+YN L N+
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI

Query:  PNLDPYYKRWLEKAVSDLYQI
        PN+    +R L+  +++ Y++
Subjt:  PNLDPYYKRWLEKAVSDLYQI

XP_038891623.1 serine/threonine-protein phosphatase 7 long form homolog [Benincasa hispida]5.1e-1640.52Show/hide
Query:  DRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNIPNLDP
        DRVM QFG +Q + Q  +    L S++LRG+HERDW+  LA  + +WEN    V+ G  I   V     Y EWY+ +SR YIT++ A+Y+ L  +PNL  
Subjt:  DRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNIPNLDP

Query:  YYKRWLEKAVSDLYQI
          +R L +  S +Y++
Subjt:  YYKRWLEKAVSDLYQI

TrEMBL top hitse value%identityAlignment
A0A2N9GZU5 PMD domain-containing protein1.3e-1235.82Show/hide
Query:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNIPNLD
        PDRV+RQFG  QD+    DTN+ +HS +LRG+ +  W+   A  +  W +    V+      GV+     Y +WY  I+RRYI +  A YN +V++  L 
Subjt:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNIPNLD

Query:  PYYKRWLEKAVSDLYQIINQNEDELADEDEDQDD
         +  +W   A S   + I  + D   DEDED+D+
Subjt:  PYYKRWLEKAVSDLYQIINQNEDELADEDEDQDD

A0A2N9HGU7 PMD domain-containing protein3.7e-1237.5Show/hide
Query:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI
        PDRV+RQFG  QD+    DTN+ +HS +LRG+ +  W+   A  +  W +    V+      GV+     Y +WY  I+RRYI +  A YN +V++
Subjt:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI

A0A2N9IGX9 PMD domain-containing protein3.7e-1237.5Show/hide
Query:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI
        PDRV+RQFG  QD+    DTN+ +HS +LRG+ +  W+   A  +  W +    V+      GV+     Y +WY  I+RRYI +  A YN +V++
Subjt:  PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI

A0A6I9SGI0 serine/threonine-protein phosphatase 7 long form homolog1.5e-1340.4Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVN
        E+ Y DRV+RQFG  Q +    DT++ LH  +LRGR ++DW     H +Q+WE+  + VI GA + G +D    Y +WY  I+RR+I ++GA ++ L++
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVN

A0A6J1E501 serine/threonine-protein phosphatase 7 long form homolog3.0e-2246.28Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI
        E+  PDRVMRQFGW+Q +    +T++ LH+ +LRGRHER WV +LA  +  WEN  N +IQG  I    DV   Y  WY +I+RRYIT++GA+YN L N+
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNI

Query:  PNLDPYYKRWLEKAVSDLYQI
        PN+    +R L+  +++ Y++
Subjt:  PNLDPYYKRWLEKAVSDLYQI

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog1.3e-0936.36Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYIT
        E+  PDRV+RQFG  Q +    D   +LH+ + RG+ E DW    + H+ +WE  ++ V+ G      +D    Y EWY  I+RR I+
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYIT

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases9.0e-1136.36Show/hide
Query:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYIT
        E+  PDRV+RQFG  Q +    D   +LH+ + RG+ E DW    + H+ +WE  ++ V+ G      +D    Y EWY  I+RR I+
Subjt:  EFIYPDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAAGAAATAGAGGAAGAAGAAATAGAGAAGGATGACGAGGAAAATGCCACGTATCCAAGAATAAACACAACCAATGTTGACGACCCGCCATTTACTAATGA
ATTAGAGAGTCCTCCAACAGACTATGACGACGAGAGTCCTCCAGTCGAGGACTCTGAGTCATTCCATGGTATGGATAGAAATATTTCCACTGGAGCGTACGATCCATCAA
TTCTTGTCTACCAGGCTACACATCGATCAAATGTAGCTTGGAAGAACATACGAGTCAGTGCTTTACATTGTAAGCGTCGTGAAGCTGTTCTTCGACGAGAGTTTATCTAC
CCAGATCGTGTGATGAGACAATTTGGGTGGATTCAAGATGTTTCTCAAATATACGACACAAATATATCATTACATTCCAACAATTTGCGAGGAAGGCATGAACGTGATTG
GGTCCAAAATTTGGCTCACCATATGCAAGTATGGGAGAATAATCTAAACTTTGTCATACAGGGGGCAATGATTGGAGGAGTTGTTGACGTGACTCACGCTTACACTGAGT
GGTATAATGCAATATCAAGAAGATACATTACACAATCTGGTGCAGCTTATAATGACCTGGTGAATATACCTAACTTGGATCCATATTATAAAAGATGGTTGGAGAAGGCA
GTCTCAGATTTATATCAAATAATTAATCAAAATGAAGATGAATTAGCTGATGAAGACGAAGATCAGGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAAGAAATAGAGGAAGAAGAAATAGAGAAGGATGACGAGGAAAATGCCACGTATCCAAGAATAAACACAACCAATGTTGACGACCCGCCATTTACTAATGA
ATTAGAGAGTCCTCCAACAGACTATGACGACGAGAGTCCTCCAGTCGAGGACTCTGAGTCATTCCATGGTATGGATAGAAATATTTCCACTGGAGCGTACGATCCATCAA
TTCTTGTCTACCAGGCTACACATCGATCAAATGTAGCTTGGAAGAACATACGAGTCAGTGCTTTACATTGTAAGCGTCGTGAAGCTGTTCTTCGACGAGAGTTTATCTAC
CCAGATCGTGTGATGAGACAATTTGGGTGGATTCAAGATGTTTCTCAAATATACGACACAAATATATCATTACATTCCAACAATTTGCGAGGAAGGCATGAACGTGATTG
GGTCCAAAATTTGGCTCACCATATGCAAGTATGGGAGAATAATCTAAACTTTGTCATACAGGGGGCAATGATTGGAGGAGTTGTTGACGTGACTCACGCTTACACTGAGT
GGTATAATGCAATATCAAGAAGATACATTACACAATCTGGTGCAGCTTATAATGACCTGGTGAATATACCTAACTTGGATCCATATTATAAAAGATGGTTGGAGAAGGCA
GTCTCAGATTTATATCAAATAATTAATCAAAATGAAGATGAATTAGCTGATGAAGACGAAGATCAGGATGATTGA
Protein sequenceShow/hide protein sequence
MEEEEIEEEEIEKDDEENATYPRINTTNVDDPPFTNELESPPTDYDDESPPVEDSESFHGMDRNISTGAYDPSILVYQATHRSNVAWKNIRVSALHCKRREAVLRREFIY
PDRVMRQFGWIQDVSQIYDTNISLHSNNLRGRHERDWVQNLAHHMQVWENNLNFVIQGAMIGGVVDVTHAYTEWYNAISRRYITQSGAAYNDLVNIPNLDPYYKRWLEKA
VSDLYQIINQNEDELADEDEDQDD