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Sed0017055 (gene) of Chayote v1 genome

Gene IDSed0017055
OrganismSechium edule (Chayote v1)
Descriptionconserved peptide upstream open reading frame 37
Genome locationLG03:8773205..8773446
RNA-Seq ExpressionSed0017055
SyntenySed0017055
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2030462.1 hypothetical protein ES319_D05G233300v1, partial [Gossypium barbadense]1.8e-1992.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

KAG4147456.1 hypothetical protein ERO13_D05G224000v2, partial [Gossypium hirsutum]1.8e-1992.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

KAG4200579.1 hypothetical protein ERO13_A05G221300v2, partial [Gossypium hirsutum]1.8e-1992.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

KJB58933.1 hypothetical protein B456_009G231400, partial [Gossypium raimondii]1.8e-1992.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

TYH18003.1 hypothetical protein ES288_A05G235200v1 [Gossypium darwinii]1.8e-1992.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

TrEMBL top hitse value%identityAlignment
A0A0D2S6R1 Uncharacterized protein (Fragment)8.9e-2092.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

A0A5D2CLC0 Uncharacterized protein2.6e-1990.57Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAA+QTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

A0A5D2GJB5 BHLH domain-containing protein8.9e-2092.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

A0A5D2QJS9 BHLH domain-containing protein8.9e-2092.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

A0A5J5RG95 Uncharacterized protein (Fragment)8.9e-2092.45Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQAATQTRFRALKYE GI+GSAT++VRVIACFQPLQDCQAEYFRHLLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29951.1 conserved peptide upstream open reading frame 356.8e-0459.38Show/hide
Query:  GSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        G+  M    IA +Q +Q CQAEYFR LLKPVT
Subjt:  GSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

AT5G09461.1 conserved peptide upstream open reading frame 436.5e-1568.52Show/hide
Query:  MVCQAATQTRFRALKYE-IGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MV Q+A QTRFR  KYE  G S   T++VRVIACFQP+ +CQAEYFRH+LKPVT
Subjt:  MVCQAATQTRFRALKYE-IGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

AT5G50011.1 conserved peptide upstream open reading frame 371.8e-1777.36Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQ+A QTRFR LK+E GI+G+  ++VRVIACFQPLQDCQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT

AT5G64341.1 conserved peptide upstream open reading frame 403.8e-1564.15Show/hide
Query:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT
        MVCQ+  +TRFR LKYE G +  +T++VRVI C+QP+ +CQAEYFR LLKPVT
Subjt:  MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCCAAGCAGCTACTCAAACAAGATTTCGAGCATTGAAATACGAAATTGGGATTTCTGGGAGTGCCACCATGATCGTTAGAGTCATAGCATGCTTTCAACCTCT
CCAAGATTGTCAGGCTGAGTATTTTCGTCATTTGCTGAAACCAGTCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGCCAAGCAGCTACTCAAACAAGATTTCGAGCATTGAAATACGAAATTGGGATTTCTGGGAGTGCCACCATGATCGTTAGAGTCATAGCATGCTTTCAACCTCT
CCAAGATTGTCAGGCTGAGTATTTTCGTCATTTGCTGAAACCAGTCACGTAG
Protein sequenceShow/hide protein sequence
MVCQAATQTRFRALKYEIGISGSATMIVRVIACFQPLQDCQAEYFRHLLKPVT