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Sed0017056 (gene) of Chayote v1 genome

Gene IDSed0017056
OrganismSechium edule (Chayote v1)
Description30S ribosomal protein S31, mitochondrial
Genome locationLG05:35415265..35418240
RNA-Seq ExpressionSed0017056
SyntenySed0017056
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448047.1 PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]1.6e-3387.5Show/hide
Query:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVARGV+AAERRSP    SMAVEGLVPILCGRGDKKTK+GK FKGSYGN+RPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]9.1e-3794.32Show/hide
Query:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVARGVMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]1.6e-3389.53Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022969451.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita maxima]1.6e-3389.53Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022971575.1 30S ribosomal protein S31, mitochondrial [Cucurbita maxima]2.2e-3594.19Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MMQWCGAVARGVMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A5A7SX60 30S ribosomal protein S317.8e-3487.5Show/hide
Query:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVARGV+AAERRSP    SMAVEGLVPILCGRGDKKTK+GK FKGSYGN+RPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial4.4e-3794.32Show/hide
Query:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVARGVMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like7.8e-3489.53Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1HXU3 30S ribosomal protein S31, mitochondrial-like7.8e-3489.53Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1I644 30S ribosomal protein S31, mitochondrial1.1e-3594.19Show/hide
Query:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MMQWCGAVARGVMAAERRSP    SMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARGVMAAERRSP---PSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
P47909 30S ribosomal protein S31, mitochondrial1.1e-1981.13Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        + CGRGDKKTK+GK FKGSYGN+RPK+EKKI+RIKD++EVP STPWPLPFKLI
Subjt:  ILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic4.7e-0440.68Show/hide
Query:  ARGVMAAERRSPPSMAVEGLVP-------ILCGRGDKKTKKGKIFKGSYGNSRPKKEKK
        ++ V      SPP++++   V        I CGRGD+KT KGK F  S+GN+RPK + K
Subjt:  ARGVMAAERRSPPSMAVEGLVP-------ILCGRGDKKTKKGKIFKGSYGNSRPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial2.7e-2359.18Show/hide
Query:  MAMMQWCGAVARGVMAAERRS------------PPSMAVEGLVPI-LCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ R +M  +R S             P+ A   +  + LCGRGDKKTKKGK FKGSYGNSR KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRS------------PPSMAVEGLVPI-LCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein1.9e-2459.18Show/hide
Query:  MAMMQWCGAVARGVMAAERRS------------PPSMAVEGLVPI-LCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ R +M  +R S             P+ A   +  + LCGRGDKKTKKGK FKGSYGNSR KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARGVMAAERRS------------PPSMAVEGLVPI-LCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 49.8e-0546.67Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTP
        + CGRGD+KT KGK F  S+GN+RP+ + K  R  +++ VP + P
Subjt:  ILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGATGCAGTGGTGCGGCGCCGTGGCAAGGGGAGTGATGGCGGCGGAGCGCCGGTCGCCGCCGTCCATGGCGGTGGAAGGTCTGGTGCCGATCCTTTGCGGCCG
AGGCGACAAGAAGACGAAGAAAGGGAAGATATTCAAAGGCTCGTACGGCAACTCCAGGCCGAAGAAGGAGAAGAAGATTCAGCGAATCAAGGATAAAATCGAGGTTCCTA
GTTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATTTGA
mRNA sequenceShow/hide mRNA sequence
GGTTTATGATGTGGTTTGACGACGAAGAAATTTTTCTTGACTTCTCATTTTGTTTGTATCTTCTTTTTTCAAGGGGATCTTTTAATCGATTAGGAGGACGACCAACTGTA
GCCTTTCTTTTAATTCCACGTGCCTCTAGTAGTTTATCTTCAATCAAACTTGACTCTTCTACATTTATGTCATCATTATCTTCCACTAAAACATTTTTCTTCATCTTCTC
CAAATCTTTGAGCAATTGAATAAAAGTTCGTGATGTGTGCTCAACAATTTCTCATGTTCTGCTGGCAGTGAAGAAATTTGGCAAGCATTACGACATAAGTAGTTGAGCTC
TGTAACCAATCTTTAGCGAAAAAATGGCGATGATGCAGTGGTGCGGCGCCGTGGCAAGGGGAGTGATGGCGGCGGAGCGCCGGTCGCCGCCGTCCATGGCGGTGGAAGGT
CTGGTGCCGATCCTTTGCGGCCGAGGCGACAAGAAGACGAAGAAAGGGAAGATATTCAAAGGCTCGTACGGCAACTCCAGGCCGAAGAAGGAGAAGAAGATTCAGCGAAT
CAAGGATAAAATCGAGGTTCCTAGTTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATTTGATTTTGTAATTTTGATCAAATCTAAGGGTTTCTCGTGGATTAGGGTTTAT
GTTTAGGCTAGATCGATTTATTATCGAAATTGGAATTGATCTGGAGTGATTAATCGTCTTGTTATGTGTATGATTATTATGTTTTCGATCTGAAATTGAATTTTGGTTCA
GATTCGTGTCCTTCCAATGATATCTGGAGATTTTTCGACATTATTTTGGGGGAGGAAAACGGATATCTATAGATTGTTACAAATTTTGGACAAAATTTTCATAAACCAAG
Protein sequenceShow/hide protein sequence
MAMMQWCGAVARGVMAAERRSPPSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNSRPKKEKKIQRIKDKIEVPSSTPWPLPFKLI