; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017074 (gene) of Chayote v1 genome

Gene IDSed0017074
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG08:1288558..1290944
RNA-Seq ExpressionSed0017074
SyntenySed0017074
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138171.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]2.5e-13895.67Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPV+A  SSSSS K+EAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]5.9e-14096.46Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+A  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

XP_022134700.1 chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]1.1e-13896.06Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPVAA   SSSSLK+EAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPF+N LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]8.0e-13794.88Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPVAA  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT 
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+N LQHISDPWHNTIVQTF GN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]5.3e-14197.24Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV+A  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic1.2e-13895.67Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPV+A  SSSSS K+EAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic2.9e-14096.46Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+A  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic2.9e-14096.46Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+A  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDN LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic5.4e-13996.06Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPVAA   SSSSLK+EAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPF+N LQHISDPWHNTIVQTFGGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic8.6e-13794.49Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPVAA  SSSSS K+EAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT 
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+N LQHISDPWHNTIVQTF GN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic3.0e-6249.38Show/hide
Query:  AARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEV
        A ++ FL G   +L     + PV + S + S++  +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE 
Subjt:  AARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEV

Query:  FTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANG
         TKIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   + GYPGG+ F+PL +     A   E + KEI NG
Subjt:  FTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANG

Query:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
        RLAMLA +G   QH  TG GP DN   H++DP H TI   F
Subjt:  RLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.1e-12483.67Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   +  +S+ +SS K+EAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPT 
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
        EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTIVQTF
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)5.8e-9072.07Show/hide
Query:  VKPVAAASSSSSSLKIEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-A
        V P  AAS S  S + +     KG WLPGL SPAYL+GSL GDNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+PEV TK G++NAP+W    
Subjt:  VKPVAAASSSSSSLKIEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-A

Query:  GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP
        GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+ECGYPG +FNPLNFAP LE KEKE+ANGRLAMLAFLGF+VQHNV GKGP
Subjt:  GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP

Query:  FDNFLQHISDPWHNTIVQTFGG
        F+N  QH++DPWHNTI+QT  G
Subjt:  FDNFLQHISDPWHNTIVQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.7e-12786.22Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV    S S+S K+EAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRWFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPTL
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN
        EAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHISDPWHNTIVQT GGN
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic6.0e-6348.41Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM
        + A AA+  P      FL G   +L ++L+V  V+   +S  ++  +  +  W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   + GYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
         E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 64.8e-5542.08Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL
        + +  T +++ V  P   R    S SS  G+L RE  V   A    SS    +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  + GYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNF--

Query:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
             P +  + KEI NGRLAMLAFLGF  Q   T + P +N + H++DP H  +   F
Subjt:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF

AT1G45474.1 photosystem I light harvesting complex gene 52.5e-5650.24Show/hide
Query:  IEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVIEFI
        +  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V++F+
Subjt:  IEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD
        L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI NGRLAM+A LGF VQ +VT  GP DN ++H+S+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD

Query:  PWHNTIVQT
        PWH TI+QT
Subjt:  PWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 52.5e-5650.24Show/hide
Query:  IEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVIEFI
        +  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V++F+
Subjt:  IEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD
        L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI NGRLAM+A LGF VQ +VT  GP DN ++H+S+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD

Query:  PWHNTIVQT
        PWH TI+QT
Subjt:  PWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.5e-12583.67Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   +  +S+ +SS K+EAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVN
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVN

Query:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL
        GRWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  E GYPGGIFNPLNFAPT 
Subjt:  GRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTL

Query:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
        EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTIVQTF
Subjt:  EAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF

AT3G61470.1 photosystem I light harvesting complex gene 24.3e-6448.41Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM
        + A AA+  P      FL G   +L ++L+V  V+   +S  ++  +  +  W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   + GYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF
         E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACAACCCAAGCCTCCGCCGCCGTATTCCGGCCATGCGCCGCCCGGTCCAGGTTCCTCTCCGGTTCGTCCGGTAAACTCCACCGTGAGCTGTCGGTTAA
ACCGGTGGCTGCTGCTTCGTCGTCGTCTTCATCTCTCAAAATTGAAGCCAAGAAGGGAGAATGGCTGCCCGGTCTGCCGTCGCCGGCGTACTTAAACGGCAGCCTTCCCG
GTGACAACGGATTCGACCCGTTGGGTCTAGCGGAGGACCCGGAAAACTTGCGGTGGTTCGTGCAGGCAGAGCTCGTCAACGGCCGTTGGGCAATGTTGGGAGTCGCGGGA
ATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGATGCGGGAAAAGCAGAGTACTTCGCATCGTCTTCGACTCTGTTCGTGATCGA
GTTCATTCTGTTTCATTACGTCGAAATTCGAAGATGGCAGGATATTAAGAACCCAGGCAGTGTTAACCAAGATCCCATTTTCAAGCAATACAGTTTGCCACCCAATGAAT
GTGGCTACCCTGGTGGCATTTTCAACCCTCTCAATTTTGCCCCAACTCTTGAGGCCAAAGAGAAGGAAATTGCTAATGGGAGACTTGCAATGTTGGCATTTTTGGGGTTC
ATTGTGCAGCACAATGTGACAGGGAAGGGGCCATTTGACAACTTCTTGCAGCATATTTCTGACCCATGGCACAACACCATTGTGCAGACTTTTGGTGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
GGCCGTTGAGTCACGAAAATCTCATAAACCAACCGTTAGATCTAAGGAGCAAACAAGAGCCACAAACTTAGCACAAAATCGAAGTTACAAAGCCCTGCAAATTACTCCCC
AAAAAGAAAAACCGATAATTCAAGAGAGAAATGGCCACCGTCACAACCCAAGCCTCCGCCGCCGTATTCCGGCCATGCGCCGCCCGGTCCAGGTTCCTCTCCGGTTCGTC
CGGTAAACTCCACCGTGAGCTGTCGGTTAAACCGGTGGCTGCTGCTTCGTCGTCGTCTTCATCTCTCAAAATTGAAGCCAAGAAGGGAGAATGGCTGCCCGGTCTGCCGT
CGCCGGCGTACTTAAACGGCAGCCTTCCCGGTGACAACGGATTCGACCCGTTGGGTCTAGCGGAGGACCCGGAAAACTTGCGGTGGTTCGTGCAGGCAGAGCTCGTCAAC
GGCCGTTGGGCAATGTTGGGAGTCGCGGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGATGCGGGAAAAGCAGAGTACTT
CGCATCGTCTTCGACTCTGTTCGTGATCGAGTTCATTCTGTTTCATTACGTCGAAATTCGAAGATGGCAGGATATTAAGAACCCAGGCAGTGTTAACCAAGATCCCATTT
TCAAGCAATACAGTTTGCCACCCAATGAATGTGGCTACCCTGGTGGCATTTTCAACCCTCTCAATTTTGCCCCAACTCTTGAGGCCAAAGAGAAGGAAATTGCTAATGGG
AGACTTGCAATGTTGGCATTTTTGGGGTTCATTGTGCAGCACAATGTGACAGGGAAGGGGCCATTTGACAACTTCTTGCAGCATATTTCTGACCCATGGCACAACACCAT
TGTGCAGACTTTTGGTGGCAACTAAATTTGAGGTTTAAAGATTGTTGATGTTGTTGTAATTTGTATTCAAAGTGAGTGTATTTGATGGAATGTGATGCAACATATTGGAT
ATCAATGTACAGAGATGGAGGGGATTCCTAGCTTGTAGCTTCCATGTTGTTCTTTAAATGACATATGATGATAAATTGGGTCTTGCTTCCTTCAA
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAAASSSSSSLKIEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAG
MLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGF
IVQHNVTGKGPFDNFLQHISDPWHNTIVQTFGGN