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Sed0017088 (gene) of Chayote v1 genome

Gene IDSed0017088
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:3726701..3727667
RNA-Seq ExpressionSed0017088
SyntenySed0017088
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570883.1 hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2056.93Show/hide
Query:  MGN-CLRSSRVTAQDPEIY----SPASEPEKVEAEDRKPAARSAMAKPRT-------TGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQ
        MGN C +S++V AQD        SP  E +KVE    KP A SAMAKP+T          KKVVRF LQE D EN  G  G+   GD  GVLRIKVV+SQ
Subjt:  MGN-CLRSSRVTAQDPEIY----SPASEPEKVEAEDRKPAARSAMAKPRT-------TGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQ

Query:  KELKQILKDRENNPCSVEELIAELKVKARTSTVSDAI
        +ELKQILK+ EN+  S+EELIAE KVK RT TVSDAI
Subjt:  KELKQILKDRENNPCSVEELIAELKVKARTSTVSDAI

KGN63254.1 hypothetical protein Csa_022493 [Cucumis sativus]3.2e-1851.33Show/hide
Query:  MGN-CLRSSRVTAQDP--EIYSP--ASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE
        MGN C +S++V AQD   + + P    EP+KV+   ++P   SAMAKP+  T GA  KKVVRFNLQE + +           GD+G GVLRIKVV+SQKE
Subjt:  MGN-CLRSSRVTAQDP--EIYSP--ASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE

Query:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAIQRPRSPPKSTFPDSE
        LKQILK RENN CS+EELI ELKVK R +TVS        P     P+ E
Subjt:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAIQRPRSPPKSTFPDSE

TYK24218.1 hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]1.7e-1955.56Show/hide
Query:  MGN-CLRSSRVTAQDPEIYS----PASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE
        MGN C R+++V AQD    +       E EKVE +  +P   SAMAKP+  T GA  KKVVRFNLQE + +      G+    D+G GVLRIKVV+SQKE
Subjt:  MGN-CLRSSRVTAQDPEIYS----PASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE

Query:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAI
        LK+ILK+RENN CS+EELI ELKVK R +TVSD I
Subjt:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAI

XP_022140639.1 uncharacterized protein LOC111011249 [Momordica charantia]5.5e-1854.14Show/hide
Query:  MGNCLRSSRVTAQDPEIYSPASEPEKVEAE---DRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKEL
        MGNCLR++RV AQD E  SP+      E     + KPAA SA+A+P+T  A      KKVVRF  Q+ + E   GG         GGVLRIKVVVSQKEL
Subjt:  MGNCLRSSRVTAQDPEIYSPASEPEKVEAE---DRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKEL

Query:  KQILKDRENNPCSVEELIAELKVKARTSTVSDA
        KQILKDRE+N  ++EEL+AELK+K R  T+SDA
Subjt:  KQILKDRENNPCSVEELIAELKVKARTSTVSDA

XP_038902397.1 uncharacterized protein LOC120089037 [Benincasa hispida]2.6e-2057.81Show/hide
Query:  NCLRSSRVTAQD-PEIYSPASEPEKVEAEDRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQIL
        NC +S++V AQD PE   P  E +KVE    KP   SAMAKP+T  A      KKVVRF LQE + +N   GD        GGVLRIKVV+SQKELKQ+L
Subjt:  NCLRSSRVTAQD-PEIYSPASEPEKVEAEDRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQIL

Query:  KDRENNPCSVEELIAELKVKARTSTVSD
        KDRENN C++EELI ELKVK RT T+SD
Subjt:  KDRENNPCSVEELIAELKVKARTSTVSD

TrEMBL top hitse value%identityAlignment
A0A0A0LQE9 Uncharacterized protein1.6e-1851.33Show/hide
Query:  MGN-CLRSSRVTAQDP--EIYSP--ASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE
        MGN C +S++V AQD   + + P    EP+KV+   ++P   SAMAKP+  T GA  KKVVRFNLQE + +           GD+G GVLRIKVV+SQKE
Subjt:  MGN-CLRSSRVTAQDP--EIYSP--ASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE

Query:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAIQRPRSPPKSTFPDSE
        LKQILK RENN CS+EELI ELKVK R +TVS        P     P+ E
Subjt:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAIQRPRSPPKSTFPDSE

A0A5D3DKZ8 Uncharacterized protein8.2e-2055.56Show/hide
Query:  MGN-CLRSSRVTAQDPEIYS----PASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE
        MGN C R+++V AQD    +       E EKVE +  +P   SAMAKP+  T GA  KKVVRFNLQE + +      G+    D+G GVLRIKVV+SQKE
Subjt:  MGN-CLRSSRVTAQDPEIYS----PASEPEKVEAEDRKPAARSAMAKPR--TTGA--KKVVRFNLQEHDHENPAGGDGEAEIGDTG-GVLRIKVVVSQKE

Query:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAI
        LK+ILK+RENN CS+EELI ELKVK R +TVSD I
Subjt:  LKQILKDRENNPCSVEELIAELKVKARTSTVSDAI

A0A6A4P389 Uncharacterized protein2.9e-0938.76Show/hide
Query:  MGNCLRSSRVTAQDPEIYSPASEP------EKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQI
        MGNCLR+++++AQD E Y    E       EKV+A        S   +  T   KK VRFN+Q  D ++  G D  ++     GV+RIKVV+++KELK++
Subjt:  MGNCLRSSRVTAQDPEIYSPASEP------EKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQI

Query:  L--KDRENNPCSVEELIAELKVKARTSTV
        L  K+ E+N  S+++L++ LK + R S V
Subjt:  L--KDRENNPCSVEELIAELKVKARTSTV

A0A6A5NC21 Uncharacterized protein5.0e-0938.58Show/hide
Query:  MGNCLRSSRVTAQDPEIYSPASEP------EKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQI
        MGNCLR+++++AQD E Y    E       EKV+A        S   +  T   KK VRFN+Q  D ++  G D  ++     GV+RIKVV+++KELK++
Subjt:  MGNCLRSSRVTAQDPEIYSPASEP------EKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQI

Query:  L--KDRENNPCSVEELIAELKVKARTS
        L  K+ E+N  S+++L++ LK + R S
Subjt:  L--KDRENNPCSVEELIAELKVKARTS

A0A6J1CG85 uncharacterized protein LOC1110112492.7e-1854.14Show/hide
Query:  MGNCLRSSRVTAQDPEIYSPASEPEKVEAE---DRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKEL
        MGNCLR++RV AQD E  SP+      E     + KPAA SA+A+P+T  A      KKVVRF  Q+ + E   GG         GGVLRIKVVVSQKEL
Subjt:  MGNCLRSSRVTAQDPEIYSPASEPEKVEAE---DRKPAARSAMAKPRTTGA------KKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKEL

Query:  KQILKDRENNPCSVEELIAELKVKARTSTVSDA
        KQILKDRE+N  ++EEL+AELK+K R  T+SDA
Subjt:  KQILKDRENNPCSVEELIAELKVKARTSTVSDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGTTTGAGAAGCAGCAGAGTAACGGCGCAAGATCCAGAGATTTATTCGCCGGCGTCGGAACCGGAGAAAGTAGAGGCGGAGGATCGTAAACCGGCCGCCAG
ATCTGCAATGGCGAAGCCGAGAACTACCGGTGCTAAGAAGGTAGTGAGGTTTAACCTTCAAGAACATGATCATGAAAATCCGGCCGGCGGCGACGGAGAAGCTGAGATCG
GCGATACCGGCGGAGTGTTGAGGATTAAAGTAGTGGTATCTCAGAAAGAATTGAAGCAGATTTTGAAGGATAGAGAGAACAATCCGTGCAGCGTTGAGGAATTGATCGCT
GAATTGAAGGTGAAAGCCAGGACCAGTACGGTTTCAGATGCTATTCAACGGCCGAGATCGCCTCCCAAAAGCACTTTTCCTGATTCTGAAGATCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
AAAAGGAAAAGCGACATTGCTTATCTCACTCCACGCGGCGCAACCAACGCTTCTCATGTGATCTCTCTCTCTCTCTCTCTCTATAAAATCACTTCCCATTCATTTTTCGT
TTTCTCAAATCCTTCATCCAATTTCTTAAAAACGAAGAAACAGAGAGAGATTCATTCCGTGAATATATAATCCATCGCATTCATCCATGGGGAACTGTTTGAGAAGCAGC
AGAGTAACGGCGCAAGATCCAGAGATTTATTCGCCGGCGTCGGAACCGGAGAAAGTAGAGGCGGAGGATCGTAAACCGGCCGCCAGATCTGCAATGGCGAAGCCGAGAAC
TACCGGTGCTAAGAAGGTAGTGAGGTTTAACCTTCAAGAACATGATCATGAAAATCCGGCCGGCGGCGACGGAGAAGCTGAGATCGGCGATACCGGCGGAGTGTTGAGGA
TTAAAGTAGTGGTATCTCAGAAAGAATTGAAGCAGATTTTGAAGGATAGAGAGAACAATCCGTGCAGCGTTGAGGAATTGATCGCTGAATTGAAGGTGAAAGCCAGGACC
AGTACGGTTTCAGATGCTATTCAACGGCCGAGATCGCCTCCCAAAAGCACTTTTCCTGATTCTGAAGATCTTCAATAAAACCCTCTTTCTCTCACCTTTCTTAGCAAAGA
TTTGAAAATATTGCTGCGGTGTGTTATTTGATCACCGAAACTTCCCCAAATTATCAATTTCGTGTTATCATTTGGATGGAAATTAGAATTAAGTTATTTCGAAACTCGTT
TGAAAAACTAATTGATTGAATCAAATATTATCTTTTATTTCTACATTTTATTGAATGATAAACATTATTTCTAAGTTTATATTGAATCATAAGTCTAAATTTTAAGTTTT
TATCTATGTGTGTTCTTATGTTCAAATTGTATGTGTGTTTTTGTAATCATTTATACATATTTGAATTAATTAGTGTATGCTTTTTTC
Protein sequenceShow/hide protein sequence
MGNCLRSSRVTAQDPEIYSPASEPEKVEAEDRKPAARSAMAKPRTTGAKKVVRFNLQEHDHENPAGGDGEAEIGDTGGVLRIKVVVSQKELKQILKDRENNPCSVEELIA
ELKVKARTSTVSDAIQRPRSPPKSTFPDSEDLQ