CuGenDBv2

Gene ID	Sed0017095
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG04:43240570..43242154
RNA-Seq Expression	Sed0017095
Synteny	Sed0017095
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-41

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR FPRS      TFH+YLKPGALAQIRNS    RFNR+ L+SQIYS+RSSS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SSP +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]

2.8e-39

72.09

Show/hide

Query:  MNRRSRPFPRSPN----TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR F RS N    +FH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSS  SPPS P++SG +QVN+VDASPCFA R+YGP CLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPN----TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGGEL
        LWFL+ SP +L +PDS PDPV+EVLGGEL
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGGEL

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]

3.3e-40

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR FPRS      TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+R SS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SSP +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]

9.6e-40

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR FPRS      TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSSS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SS  +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

5.6e-40

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR F RS      TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSSS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SSP +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A5D3C9X6 Uncharacterized protein

4.2e-33

70.16

Show/hide

Query:  MNRRSRPFPRSPN-TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKSLWF
        MNRRSR    S + TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+ SS     S PI+SG +QVN+VDASP FA R+YGPL LQRKKLLASKSLWF
Subjt:  MNRRSRPFPRSPN-TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKSLWF

Query:  LNSSPASLIIPDSLPDPVVEVLGG
        L SSP +L  PDS PDPV+EVLGG
Subjt:  LNSSPASLIIPDSLPDPVVEVLGG

A0A6J1C424 uncharacterized protein LOC111007734

1.4e-39

72.09

Show/hide

Query:  MNRRSRPFPRSPN----TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR F RS N    +FH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSS  SPPS P++SG +QVN+VDASPCFA R+YGP CLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPN----TFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGGEL
        LWFL+ SP +L +PDS PDPV+EVLGGEL
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGGEL

A0A6J1EXJ2 uncharacterized protein LOC111437092

1.6e-40

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR FPRS      TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+R SS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SSP +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

1.5e-35

71.2

Show/hide

Query:  MNRRSRPFPRS-PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASK-SLW
        MNRRSR    S   TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSSS SP + PI SG +QVN+ DASPCFA R+YGPLCLQRKKLLA+K SLW
Subjt:  MNRRSRPFPRS-PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASK-SLW

Query:  FLNSSPASLIIPDSLPDPVVEVLGG
        FL SSP +L  PDS PDPV+ VLGG
Subjt:  FLNSSPASLIIPDSLPDPVVEVLGG

A0A6J1JMJ5 uncharacterized protein LOC111486563

4.6e-40

73.23

Show/hide

Query:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS
        MNRRSR FPRS      TFH+YLKPGALAQIRNS    RFNR+ LVSQIYS+RSSS SPP+ PI+S  +QVN+VDASPCFA R+YGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRS----PNTFHRYLKPGALAQIRNS----RFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKS

Query:  LWFLNSSPASLIIPDSLPDPVVEVLGG
        LWFL+SS  +L  PDS PDPV+EVLGG
Subjt:  LWFLNSSPASLIIPDSLPDPVVEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

1.1e-09

40.38

Show/hide

Query:  SRPFPRSPNTFHRYLKPGALAQIRNSRFNRLKLVSQIYSSRSSSPSPPSPPINS---GAIQVNLVDASPCFAARIYGPLCLQRKKLLASKSLWF-LNSSP
        SR   R  + FHRY+KPGALAQIRN+R N  +    +  S S    PPS    S      Q   +D  P   ++IYGP  + RKKL  ++S    LN SP
Subjt:  SRPFPRSPNTFHRYLKPGALAQIRNSRFNRLKLVSQIYSSRSSSPSPPSPPINS---GAIQVNLVDASPCFAARIYGPLCLQRKKLLASKSLWF-LNSSP

Query:  ASLI
         S++
Subjt:  ASLI

AT5G54970.1 unknown protein

1.3e-10

48.89

Show/hide

Query:  RSPNTFHRYLKPGALAQIRNSRFNRLKLVSQI-YSSRSSSPSPPSPPINS----GAIQVNL-VDASPCFAARIYGPLCLQRKKLLASKSL
        R  + FHRYLKPGALAQIRNSR N     S +  SS S    P SP  NS     A   NL +D  P    +IYGP   QRKKL A++S+
Subjt:  RSPNTFHRYLKPGALAQIRNSRFNRLKLVSQI-YSSRSSSPSPPSPPINS----GAIQVNL-VDASPCFAARIYGPLCLQRKKLLASKSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATCGAAGATCCAGACCCTTTCCCCGATCGCCCAACACCTTTCACCGCTACCTCAAACCCGGCGCCCTCGCCCAAATCCGCAACTCCCGCTTCAATCGCCTCAAATT
GGTCTCTCAGATCTACTCCTCTCGCTCCTCGTCGCCATCGCCGCCGTCTCCGCCGATCAACTCCGGTGCAATTCAGGTGAACCTTGTCGATGCCTCTCCCTGCTTTGCTG
CCAGGATCTACGGCCCCCTCTGCTTGCAGAGGAAGAAGCTTTTGGCTTCTAAGTCCTTGTGGTTCCTTAATTCTAGTCCGGCGAGTTTGATAATACCTGATTCTTTGCCT
GATCCGGTTGTTGAAGTGTTGGGGGGTGAATTGTAG

mRNA sequence

Show/hide mRNA sequence

GTTGTGTTCCCATTTTATTTTCCCTCCACCTCTTTCCCGCCTCTCGTCTCCTCCCGCCCACTCCCCACTCCATAAAAAAAAACCCTAATCGCCATTTCCAATCATCCAAT
TCTCTGCAAACATGAATCGAAGATCCAGACCCTTTCCCCGATCGCCCAACACCTTTCACCGCTACCTCAAACCCGGCGCCCTCGCCCAAATCCGCAACTCCCGCTTCAAT
CGCCTCAAATTGGTCTCTCAGATCTACTCCTCTCGCTCCTCGTCGCCATCGCCGCCGTCTCCGCCGATCAACTCCGGTGCAATTCAGGTGAACCTTGTCGATGCCTCTCC
CTGCTTTGCTGCCAGGATCTACGGCCCCCTCTGCTTGCAGAGGAAGAAGCTTTTGGCTTCTAAGTCCTTGTGGTTCCTTAATTCTAGTCCGGCGAGTTTGATAATACCTG
ATTCTTTGCCTGATCCGGTTGTTGAAGTGTTGGGGGGTGAATTGTAGATGTGGTTATGGAATAGGTTTTTTGAACTTGTGAATCGATGTATCAATGTGTAATGAATGGTA
TACCTTTTGTGGAATTTTTGTTCTCTTGATTTTAATGGAATTGAGATAATAAGATCTGTTATATTGACGATCTGTTGCTTGTTCGAGACTTTGAGTTGGGATTTTATTGA
ACCGTTCTAATTTGGGGCTTATGCTGAACTTCTTGCAAATATCCACATTGTCTCTATTAGACAACGGTTGTATATGACTGATAAAGTAAGCGTGGAAGCATTTGTGAACT
TTTTCCAGTGATTTCATGTATACTGTGGGTTTGTTTTCTCTTGATTACTTGGTTTGATCATCAACTGGTTTATAACTATAATGTTGCCTTCATGGTGTGTTGATTACTTG
GATTCTATATTGATGATGTTGGAATTTACTTTATACATTTAGTATGAATTTGTTTTCTGCTAAATCTATAGTTTGAGATAAACAAATTACCATATTCTAATGCCTGACTT
TCTAACTTTGGATGTAGTTTTAGATTAATGCTCTTTAATGGTATGGCCCTTGTACTGAGGTTTGTAGATATTAATGTGATGCAACTGATCTTCTCATCCCATCATAATAA
AGGAAAGATCTTGAATGCACTACTAGCATTTTAGGGTTTTTACTGTTATTTGTGGTTGATCAATTGGGTGTATGATTATATAAAATGTGGCATTTTTTACTGGTTTAATT
ACCATGTTGTATGTGTGCACTATGTGTGCTTTTTGGCTGTTCAGTTTTTGCAATTAGTATGAGGGGTTTTGACAATCTTCATTTGCCTTGCATAATTTTCATTTCTTAAA
GCTCATTTGTTTAGGAACTTTAGTTAAGGTAGCCACTATTCTATTTGTTCTTAGGGATAATTGCATCTTCCTGCTATTAAGGTTAATCCCTTGATATCTAATAATCTTTT
ATGATGATAATTCATTTCTTACTTTAATTGCTTTGAATATATGTTAATTTCTTAATGTTCATTCATTAACTATGTTAAGCTAGTTAATCTAAGATTTGTTATTAAGGATC
ATTTTCATTGAAGGCAACATATAAGTTTTATCCCTTACCTCTTAT

Protein sequence

Show/hide protein sequence

MNRRSRPFPRSPNTFHRYLKPGALAQIRNSRFNRLKLVSQIYSSRSSSPSPPSPPINSGAIQVNLVDASPCFAARIYGPLCLQRKKLLASKSLWFLNSSPASLIIPDSLP
DPVVEVLGGEL

Sed0017095 (gene) of Chayote v1 genome