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Sed0017102 (gene) of Chayote v1 genome

Gene IDSed0017102
OrganismSechium edule (Chayote v1)
Descriptionouter envelope pore protein 24, chloroplastic-like
Genome locationLG13:21783347..21785834
RNA-Seq ExpressionSed0017102
SyntenySed0017102
Gene Ontology termsGO:0034765 - regulation of ion transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0022843 - voltage-gated cation channel activity (molecular function)
InterPro domainsIPR034626 - Outer envelope pore protein 24


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037850.1 Outer envelope pore protein 24, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1346.79Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SWG NRTVLDGTLV DSAN                                            K YGDD  K T QTTTK LGLEWTRN+KS+GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV L DE
Subjt:  VASVYLADE

XP_008466586.1 PREDICTED: outer envelope pore protein 24, chloroplastic-like [Cucumis melo]1.5e-1344.95Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRT+LDGTLV DSAN                                            K YGDD FKAT QTT+K LGLEWTRN+KS+GNFK+
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

XP_022976348.1 outer envelope pore protein 24B, chloroplastic-like [Cucurbita maxima]1.9e-1346.79Show/hide
Query:  LKSWGANRTVLDGTLVLDSANKF--------------------------------------------YGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRTVLDG LVLDSANKF                                            Y DD  KAT QTTTK LGLEWTRN+KS GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSANKF--------------------------------------------YGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

XP_023525922.1 outer envelope pore protein 24, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-1346.79Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SWG NRTVLDGTLV DSAN                                            K YGDD  K T QTTTK LGLEWTRN+KS+GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV L DE
Subjt:  VASVYLADE

XP_038903165.1 outer envelope pore protein 24, chloroplastic [Benincasa hispida]1.3e-1448.62Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRTVLDGTLVLDSAN                                            K YGDD FKAT QTT+K LGLEWTRN+KS+GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV LADE
Subjt:  VASVYLADE

TrEMBL top hitse value%identityAlignment
A0A0A0LIV8 Uncharacterized protein2.7e-1344.04Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  +RT+LDGTLV DSAN                                            K YGDD FKAT QTT+K LGLEWTRN+KS+GNFK+
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

A0A1S3CRS8 outer envelope pore protein 24, chloroplastic-like7.1e-1444.95Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRT+LDGTLV DSAN                                            K YGDD FKAT QTT+K LGLEWTRN+KS+GNFK+
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

A0A5D3D7T8 Outer envelope pore protein 247.1e-1444.95Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRT+LDGTLV DSAN                                            K YGDD FKAT QTT+K LGLEWTRN+KS+GNFK+
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

A0A6J1ILV0 outer envelope pore protein 24B, chloroplastic-like9.2e-1446.79Show/hide
Query:  LKSWGANRTVLDGTLVLDSANKF--------------------------------------------YGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SW  NRTVLDG LVLDSANKF                                            Y DD  KAT QTTTK LGLEWTRN+KS GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSANKF--------------------------------------------YGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV +ADE
Subjt:  VASVYLADE

A0A6J1J3S8 outer envelope pore protein 24, chloroplastic-like2.1e-1345.87Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + SWG +RTVLDGTLV DSAN                                            K YGDD  K T QTTTK LGLEWTRN+KS+GNFKI
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV L DE
Subjt:  VASVYLADE

SwissProt top hitse value%identityAlignment
B8ANR3 Outer envelope pore protein 24, chloroplastic1.2e-0552.27Show/hide
Query:  KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE
        KF G DA KAT Q +TK L L+WTR+ K   +FK+ AS  L+D+
Subjt:  KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE

O49929 Outer envelope pore protein 24, chloroplastic1.2e-1038.53Show/hide
Query:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI
        + S G NRT+LDGTLV D +N                                            K YGDD+ KA+ QT++K LGLEWTRN K  G FK+
Subjt:  LKSWGANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKI

Query:  VASVYLADE
        VASV LA+E
Subjt:  VASVYLADE

Q1H5C9 Outer envelope pore protein 24A, chloroplastic2.5e-0834.29Show/hide
Query:  GANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASV
        G NRT++DG+ V+D AN                                            K YG D  KAT QT++K LGLEW+ N KS G+FK+ AS+
Subjt:  GANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASV

Query:  YLADE
         LA+E
Subjt:  YLADE

Q75IQ4 Outer envelope pore protein 24, chloroplastic1.2e-0552.27Show/hide
Query:  KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE
        KF G DA KAT Q +TK L L+WTR+ K   +FK+ AS  L+D+
Subjt:  KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE

Q8H0Y1 Outer envelope pore protein 24B, chloroplastic1.2e-0735.92Show/hide
Query:  NRTVLDGTLVLDSANK--------------------------------------------FYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYL
        NRT++DG+LV+DSANK                                            FY  D  +AT QT++K LG+EW+RN K++G FK+ ASV L
Subjt:  NRTVLDGTLVLDSANK--------------------------------------------FYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYL

Query:  ADE
        ADE
Subjt:  ADE

Arabidopsis top hitse value%identityAlignment
AT1G45170.1 unknown protein1.8e-0934.29Show/hide
Query:  GANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASV
        G NRT++DG+ V+D AN                                            K YG D  KAT QT++K LGLEW+ N KS G+FK+ AS+
Subjt:  GANRTVLDGTLVLDSAN--------------------------------------------KFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASV

Query:  YLADE
         LA+E
Subjt:  YLADE

AT1G45170.2 unknown protein5.0e-1252.46Show/hide
Query:  GANRTVLDGTLVLDSANKFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE
        G NRT++DG+ V+D ANK   +  + AT QT++K LGLEW+ N KS G+FK+ AS+ LA+E
Subjt:  GANRTVLDGTLVLDSANKFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE

AT5G42960.1 unknown protein8.8e-0935.92Show/hide
Query:  NRTVLDGTLVLDSANK--------------------------------------------FYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYL
        NRT++DG+LV+DSANK                                            FY  D  +AT QT++K LG+EW+RN K++G FK+ ASV L
Subjt:  NRTVLDGTLVLDSANK--------------------------------------------FYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYL

Query:  ADE
        ADE
Subjt:  ADE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTAAAAAGTTGGGGTGCTAACAGAACAGTTCTCGACGGGACCCTAGTTTTGGATTCGGCTAACAAGTTTTATGGCGATGATGCATTCAAGGCTACGTGCCAGAC
TACAACCAAGGAACTGGGATTAGAATGGACAAGGAATGTGAAGTCCAATGGAAATTTCAAGATTGTAGCATCAGTCTACCTGGCAGATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTAAAAAGTTGGGGTGCTAACAGAACAGTTCTCGACGGGACCCTAGTTTTGGATTCGGCTAACAAGTTTTATGGCGATGATGCATTCAAGGCTACGTGCCAGAC
TACAACCAAGGAACTGGGATTAGAATGGACAAGGAATGTGAAGTCCAATGGAAATTTCAAGATTGTAGCATCAGTCTACCTGGCAGATGAATAA
Protein sequenceShow/hide protein sequence
MSLKSWGANRTVLDGTLVLDSANKFYGDDAFKATCQTTTKELGLEWTRNVKSNGNFKIVASVYLADE