; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017113 (gene) of Chayote v1 genome

Gene IDSed0017113
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG10:27764521..27765121
RNA-Seq ExpressionSed0017113
SyntenySed0017113
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.1e-2569.62Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        +L+LSRE+IKEIFREHDIDGDG+L +SEM KAF F G+ LPFYKA YG++HAD++GDG I+E+EL+KLVDYAE+FQ+++
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]4.0e-2467.09Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        RL+LSRE+IKEIFREHDIDGDG+L ++EM KAF   G+ LPFYKA YG++HAD++GDG I+E+EL+KLVDYA++FQ+++
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]9.0e-2467.09Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        +   SREE+KEIFREHDIDGDG L ISE+ KA  FLG+S+PFYKA YG+++ D++GDG+I EDEL+KL+DYAERFQ R+
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]4.0e-2467.09Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        RL+LSRE+IKEIFREHDIDGDG+L ++EM KAF   G+ LPFYKA YG++HAD++GDG I+E+EL+KLVDYA++FQ+++
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

XP_023002888.1 calmodulin-like [Cucurbita maxima]9.9e-2365.43Show/hide
Query:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        G  ++LSR +IKEIF EHDIDGDG L +SE+TKAF+F G+ +P YKA YGL++AD DGDG+I E+ELEKLVDYAER   +K
Subjt:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein4.3e-2467.09Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        +   SREE+KEIFREHDIDGDG L ISE+ KA  FLG+S+PFYKA YG+++ D++GDG+I EDEL+KL+DYAERFQ R+
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

A0A0A0LRC1 Uncharacterized protein1.9e-2467.09Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        RL+LSRE+IKEIFREHDIDGDG+L ++EM KAF   G+ LPFYKA YG++HAD++GDG I+E+EL+KLVDYA++FQ+++
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

A0A5A7UYC0 Putative calcium-binding protein CML101.0e-2569.62Show/hide
Query:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        +L+LSRE+IKEIFREHDIDGDG+L +SEM KAF F G+ LPFYKA YG++HAD++GDG I+E+EL+KLVDYAE+FQ+++
Subjt:  RLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

A0A6J1GK16 calmodulin-like4.8e-2365.43Show/hide
Query:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        G  ++LSR +IKEIF EHDIDGDG L +SE+TKAF+F G+ +P YKA YGL++AD DGDG+I E+ELEKLVDYAER   +K
Subjt:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

A0A6J1KUW2 calmodulin-like4.8e-2365.43Show/hide
Query:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK
        G  ++LSR +IKEIF EHDIDGDG L +SE+TKAF+F G+ +P YKA YGL++AD DGDG+I E+ELEKLVDYAER   +K
Subjt:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRK

SwissProt top hitse value%identityAlignment
P05933 Calmodulin7.4e-0532.31Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        + EE++E F+  D DG+G + + E+T     LG  L   +    +  AD DGDG+I+ +E  +++
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

P62184 Calmodulin7.4e-0536.92Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        S EEI+E FR  D DGDG +  +E+      LG  L   +    +  AD DGDG ++ +E  K++
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

Q8RYJ9 Putative calcium-binding protein CML236.7e-0636.62Show/hide
Query:  LSREEIKEIFREHDIDGDGKLCISEMTKAF-AFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAE
        ++ +E + +F   D DGDGK+  +E+     A LG  +P  + Q  ++ AD DGDG++DE+E  +LV   E
Subjt:  LSREEIKEIFREHDIDGDGKLCISEMTKAF-AFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAE

Q8X187 Calmodulin5.7e-0538.46Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        S EEIKE F+  D DG+G +  +E+      LG  L   +    +  AD DGDG I+ DE  K++
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

Q9NZT1 Calmodulin-like protein 55.7e-0529.73Show/hide
Query:  MSCGGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        ++   + R   E+++  FR  D DGDG + + E+ +A A LG  LP  +    +  AD D DG ++ +E  +++
Subjt:  MSCGGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein3.4e-0532.35Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYA
        + E++  +FR  D DG+G +  +E+  + A LG++L   +    +  AD DGDG I+  E  K ++ A
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYA

AT1G76640.1 Calcium-binding EF-hand family protein3.4e-0527.71Show/hide
Query:  LRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV----DYAERFQNRKL
        L     +++ +F   D + DG++   E+ K+F  LG  +   +A+  +  +D DGDGM+D +E   L+    ++ E  + RK+
Subjt:  LRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV----DYAERFQNRKL

AT3G50770.1 calmodulin-like 412.6e-0530.77Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        S+EE++++F   D DGDGK+   E+   F  +G  +    AQ  ++  D D DG +  ++   L+
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

AT4G14640.1 calmodulin 82.6e-0533.85Show/hide
Query:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        + EE+KE F+  D D +G +  SE++     LG  L   + +  +  AD DGDG ++ DE  K++
Subjt:  SREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV

AT5G37770.1 EF hand calcium-binding protein family5.3e-0630.99Show/hide
Query:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV
        GG  R    ++KE F  +D+DG+G++   E+      LG        +  +S  D DGDG ++ DE +K++
Subjt:  GGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGTGGAGGCAGGCTACGACTCTCCAGGGAGGAGATCAAGGAGATCTTCCGAGAGCACGACATCGATGGTGATGGTAAATTGTGCATCAGCGAGATGACGAAGGC
CTTCGCGTTCCTCGGCAACTCTCTTCCTTTCTACAAAGCTCAATACGGATTGTCTCATGCTGATGACGATGGAGATGGCATGATCGATGAGGACGAGCTGGAAAAGCTTG
TCGACTATGCCGAGAGGTTTCAAAACAGGAAGCTGCGCTGA
mRNA sequenceShow/hide mRNA sequence
AAGCAAAAGAAACTTAACCCTTTGGCAAAACAGTGAAATTAGATCAATATTTCTGAGAAAATGTCTTGTGGAGGCAGGCTACGACTCTCCAGGGAGGAGATCAAGGAGAT
CTTCCGAGAGCACGACATCGATGGTGATGGTAAATTGTGCATCAGCGAGATGACGAAGGCCTTCGCGTTCCTCGGCAACTCTCTTCCTTTCTACAAAGCTCAATACGGAT
TGTCTCATGCTGATGACGATGGAGATGGCATGATCGATGAGGACGAGCTGGAAAAGCTTGTCGACTATGCCGAGAGGTTTCAAAACAGGAAGCTGCGCTGAAGCTATGTG
TAATTTCGTCTGCCATAATATATCGTCATTCCTTTCATCCGACAGTTTACTGTCAAGTTTGGTGTTTTTTATGTTCTGTATTAATAAAAAAAAGTCAGTCCTACTTTGAT
TTGGTTATTAATTTATCTTATTATAAAAAAAAAAGTTTGGTGTTTTATGTTATGTATTAATTTTGTTAGTGTGGTCTGGATATATTAAGTTGCAGTTTATGACCTGAATA
AGGTACTTGCCTTTACAAGTCCAAAAATCTAATCAAGTAAAAACTAATGGC
Protein sequenceShow/hide protein sequence
MSCGGRLRLSREEIKEIFREHDIDGDGKLCISEMTKAFAFLGNSLPFYKAQYGLSHADDDGDGMIDEDELEKLVDYAERFQNRKLR