; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017120 (gene) of Chayote v1 genome

Gene IDSed0017120
OrganismSechium edule (Chayote v1)
DescriptionF-box domain-containing protein
Genome locationLG07:12060204..12063544
RNA-Seq ExpressionSed0017120
SyntenySed0017120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600508.1 hypothetical protein SDJN03_05741, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5073.03Show/hide
Query:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MG+ALLSV             A TPR SHG  T SL FSS R  ++ LSSSSS  SSSS+SVV++++NSS P  D LSL+SESDPD +SFRGCKACG+EE
Subjt:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCP FVASGGRYKRRGQSMDEVTSGGARTEASA  G+K S SKKKS+K
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

XP_008451930.1 PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo]7.8e-5177.84Show/hide
Query:  MGTALLSVAAITPRFSHGST-TSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRI
        MGTALLSV A     SH S  T+SL FSS  SR T+  SSSS  SSSS SVV+++ NSS P  DQLSL+SESDPD +SFRGCKACG+EEIERGCNGEGRI
Subjt:  MGTALLSVAAITPRFSHGST-TSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRI

Query:  QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGG RTEASA   RK SSSKKKS+K
Subjt:  QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

XP_022136433.1 uncharacterized protein LOC111008142 [Momordica charantia]9.2e-5273.86Show/hide
Query:  MGTALLSVAA------------ITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MGTALLSV A             TPR+++GSTT SLGFSS R R++ LSSSS   SSSSASVV++ +NSS P  D+LSL+SESDPD +SFRGCKACG+EE
Subjt:  MGTALLSVAA------------ITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKS
        IERGCN EGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG RT+AS GA RK S SKKKS
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKS

XP_022982791.1 uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima]9.2e-5273.6Show/hide
Query:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MGTALLSV             A +PR+SHG  T SL FSS R  ++ LSS     SSSSASVV++++NSS P  D LSL+SESDPD +SFRGCKACGREE
Subjt:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        IERGCNG+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR EASA AGRK SSSKKKS+K
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

XP_038900223.1 uncharacterized protein LOC120087246 isoform X2 [Benincasa hispida]1.1e-5275.57Show/hide
Query:  MGTALLSVAA---------ITPRFSHGS-TTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIE
        MGTALLSV A          TP  SH S + +SL FSS RS +T LSSSS   SSSSASVV++++NSS P  DQLSL+S+SDPD +SFRGCKACGREEIE
Subjt:  MGTALLSVAA---------ITPRFSHGS-TTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIE

Query:  RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGF+ASGGRYKRRGQSMDEVTSGG RTEASA AG+K SSSKKKS+K
Subjt:  RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

TrEMBL top hitse value%identityAlignment
A0A1S3BSL8 uncharacterized protein LOC103493082 isoform X23.8e-5177.84Show/hide
Query:  MGTALLSVAAITPRFSHGST-TSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRI
        MGTALLSV A     SH S  T+SL FSS  SR T+  SSSS  SSSS SVV+++ NSS P  DQLSL+SESDPD +SFRGCKACG+EEIERGCNGEGRI
Subjt:  MGTALLSVAAITPRFSHGST-TSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRI

Query:  QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGG RTEASA   RK SSSKKKS+K
Subjt:  QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

A0A6J1C7J9 uncharacterized protein LOC1110081424.5e-5273.86Show/hide
Query:  MGTALLSVAA------------ITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MGTALLSV A             TPR+++GSTT SLGFSS R R++ LSSSS   SSSSASVV++ +NSS P  D+LSL+SESDPD +SFRGCKACG+EE
Subjt:  MGTALLSVAA------------ITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKS
        IERGCN EGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG RT+AS GA RK S SKKKS
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKS

A0A6J1FN06 uncharacterized protein LOC1114472962.1e-4973.53Show/hide
Query:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MG+ALLSV             A TPR SHG  T SL FSS R  ++ LSSSSS  SSSS+SVV++++NSS P  D LSL+SESDPD +SFRGCKACG+EE
Subjt:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGS
        IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCP FVASGGRYKRRGQSMDEVTSGGARTEASA AG+K S
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGS

A0A6J1J0C4 uncharacterized protein LOC111481538 isoform X24.5e-5273.6Show/hide
Query:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MGTALLSV             A +PR+SHG  T SL FSS R  ++ LSS     SSSSASVV++++NSS P  D LSL+SESDPD +SFRGCKACGREE
Subjt:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK
        IERGCNG+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR EASA AGRK SSSKKKS+K
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSK

A0A6J1J5I4 uncharacterized protein LOC111481538 isoform X19.3e-5073.1Show/hide
Query:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE
        MGTALLSV             A +PR+SHG  T SL FSS R  ++ LSS     SSSSASVV++++NSS P  D LSL+SESDPD +SFRGCKACGREE
Subjt:  MGTALLSVA------------AITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREE

Query:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSS
        IERGCNG+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGAR EASA AGRK SS
Subjt:  IERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42070.1 unknown protein2.9e-2752.63Show/hide
Query:  SFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVT
        S SSS +SVVE D++               D +  +F GC+ACG+EE E GCNG+GRIQGGIATVPGFGWWPIKAYRPCP FV +GGRY+R GQSMDEV 
Subjt:  SFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVT

Query:  SGGARTEASAGAG--------RKGSSSKKKSSK
         G   +++S             K +SS K S+K
Subjt:  SGGARTEASAGAG--------RKGSSSKKKSSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCGTCCTCGCACAGATGGGAACTGCACTTCTCTCCGTTGCTGCGATCACTCCAAGATTTAGTCATGGATCCACAACTTCTTCACTTGGGTTTTCTTCCCATAG
ATCCCGCCTCACCTCCCTCTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCAGCTTCTGTTGTGGAACAAGATTCAAATTCTTCTGTCCCTGATGGTGATCAGCTTTCTC
TCCGCTCTGAATCTGACCCAGATTATGCTTCTTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAGAAATCGAGAGGGGATGCAATGGTGAGGGAAGGATTCAAGGTGGCATT
GCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCCTGTCCTGGCTTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGT
TACATCTGGAGGAGCAAGGACTGAAGCCTCCGCCGGTGCTGGCAGAAAGGGCTCGTCGAGCAAGAAAAAGTCGTCTAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
GAGCAGAGAGGGTGAGAGCAAAGCGTAATAATGGGCAATGGGCATGAATGTTCATCGTCCTCGCACAGATGGGAACTGCACTTCTCTCCGTTGCTGCGATCACTCCAAGA
TTTAGTCATGGATCCACAACTTCTTCACTTGGGTTTTCTTCCCATAGATCCCGCCTCACCTCCCTCTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCAGCTTCTGTTGT
GGAACAAGATTCAAATTCTTCTGTCCCTGATGGTGATCAGCTTTCTCTCCGCTCTGAATCTGACCCAGATTATGCTTCTTTCAGAGGGTGTAAGGCCTGTGGAAGGGAAG
AAATCGAGAGGGGATGCAATGGTGAGGGAAGGATTCAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCCTGTCCTGGCTTTGTA
GCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACTGAAGCCTCCGCCGGTGCTGGCAGAAAGGGCTCGTCGAGCAA
GAAAAAGTCGTCTAAGGAATAACTTAGCCAGGCTTACCATCCACAAGTTGATGTCAAACAGGGAAGAAATGAAGGATGGATGATGCAAACTTGCTTACATGGAAATGAAA
CACCAATGTGAATGGGTGGGAACTGAACAATTCATTTGGCTTCTCAAATTTTCCTAGCAGTACATGTCCTAAAAGTTCTCATATGGATTCATTTGGCTAGATTCTCATTT
CTTTAGGCTTCTGTAATATTAGAATGCTACATTTAAAGAATACATTTTCATTAGTTTGTTTGAGACTTATGAAGATTCTTTATTTGCAGAACATTGTTTCCTTTCCAGCT
GCAAATGGATGCAATGTTTATTCTTTCA
Protein sequenceShow/hide protein sequence
MFIVLAQMGTALLSVAAITPRFSHGSTTSSLGFSSHRSRLTSLSSSSSSFSSSSASVVEQDSNSSVPDGDQLSLRSESDPDYASFRGCKACGREEIERGCNGEGRIQGGI
ATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGARTEASAGAGRKGSSSKKKSSKE