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Sed0017123 (gene) of Chayote v1 genome

Gene IDSed0017123
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:6747354..6747614
RNA-Seq ExpressionSed0017123
SyntenySed0017123
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0554.24Show/hide
Query:  AVKVIPNVVVATQAPAAET-AIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLF
        A  V+P      +     T ++GYRA G GKV+S+IPK+RKLVKTM+YH IK F+KSLF
Subjt:  AVKVIPNVVVATQAPAAET-AIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLF

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0449.25Show/hide
Query:  AVKVIPNVVVATQAPAAET-AIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSR
        A  V+P +          T ++ YRA G GKV+S+IPK+RKLVKTM+YH IK F+KSLF   P   R
Subjt:  AVKVIPNVVVATQAPAAET-AIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSR

XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]1.2e-0452.86Show/hide
Query:  KVIPN--VVVATQAPAAETAIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSRAGAP
        ++ PN  V+++  A  A  AIG RA  GGKV+S+IPKRR LVKTMIY+ IK F+ SLF   PP S    P
Subjt:  KVIPN--VVVATQAPAAETAIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSRAGAP

TrEMBL top hitse value%identityAlignment
A0A6J1CJW3 uncharacterized protein LOC1110119635.9e-0552.86Show/hide
Query:  KVIPN--VVVATQAPAAETAIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSRAGAP
        ++ PN  V+++  A  A  AIG RA  GGKV+S+IPKRR LVKTMIY+ IK F+ SLF   PP S    P
Subjt:  KVIPN--VVVATQAPAAETAIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSRAGAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGATCAAAACCAGCCGCCGTGAAGGTGATACCCAATGTAGTGGTGGCGACGCAGGCACCGGCGGCTGAAACCGCGATTGGGTACAGAGCCGGCGGCGGAGGAAA
AGTTGAGTCTTTGATTCCGAAGAGGAGGAAGTTAGTGAAAACCATGATATATCATTCTATAAAGGGTTTTGTTAAATCCCTCTTTGTTTGTACACCGCCGTACTCCCGCG
CCGGAGCTCCATCTCACCTCAAATGTATGTTTTGCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGGATCAAAACCAGCCGCCGTGAAGGTGATACCCAATGTAGTGGTGGCGACGCAGGCACCGGCGGCTGAAACCGCGATTGGGTACAGAGCCGGCGGCGGAGGAAA
AGTTGAGTCTTTGATTCCGAAGAGGAGGAAGTTAGTGAAAACCATGATATATCATTCTATAAAGGGTTTTGTTAAATCCCTCTTTGTTTGTACACCGCCGTACTCCCGCG
CCGGAGCTCCATCTCACCTCAAATGTATGTTTTGCGATTAA
Protein sequenceShow/hide protein sequence
MTGSKPAAVKVIPNVVVATQAPAAETAIGYRAGGGGKVESLIPKRRKLVKTMIYHSIKGFVKSLFVCTPPYSRAGAPSHLKCMFCD