CuGenDBv2

Gene ID	Sed0017131
Organism	Sechium edule (Chayote v1)
Description	ThiF domain-containing protein
Genome location	LG01:3735655..3736541
RNA-Seq Expression	Sed0017131
Synteny	Sed0017131
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022944248.1 uncharacterized protein LOC111448755 [Cucurbita moschata]

1.7e-31

61.65

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        MNRR Q S    ANR E FHKYLKPGALA++RDSRI+AR +R+NSLSQ YLRR    ES  +S  GQSE DV     DFP L+GR+YGPLCLKRKK + I
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PTADL+ D I     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

XP_022986202.1 uncharacterized protein LOC111484017 [Cucurbita maxima]

1.6e-32

62.41

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        MNRR Q+S    ANR E FHK+LKPGALA++RDSRI+ARS+R+NSLSQ +LRR   +ES  +S  GQSE DV     DFP L+GR+YGPLCLKRKKLA I
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PT DLT D I     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]

7.5e-19

46.4

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI
        MNRR +  P SS +  E+FHKYLKPGALA++R+SR+ AR  R N +SQ Y  R+  +  P    D    + ++ D +  F  AGR+YGPLCL+RKKL A 
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPISDV
        K  WF  S+    T D  PDP+ +V
Subjt:  KPSWFSISNFQAPTADLTPDPISDV

XP_023513131.1 uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo]

8.3e-34

63.91

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        MNRR Q S    ANR E FHKYLKPGALA++RDSRI+ARS+R+NSLSQ YLRR   +ES  +S  GQSE DV     DFP LAGR+YGPLCLKRKK A I
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PT DLT +PI     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

XP_038902395.1 uncharacterized protein LOC120089036 [Benincasa hispida]

3.5e-32

60.9

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        M R+ + SP   A+R E FHKYLKPGALA++RDS+I+A+ +RFNSLSQ YLRR  P+ S  +S  GQSE DV D   DFP LAGR YGP CLKRKKLAAI
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PT D+T DP+     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

TrEMBL top hits

e value

%identity

Alignment

A0A5N6RCV3 Uncharacterized protein

3.4e-17

47.73

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Query:  MNRRRQISPN---SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSY------LRRAPPMESPAVSPDGQSETDVADVAGDFPLAGRIYGPLCL
        MNRR + S N   SS NR E FH+YLKPGALA++RDSRI+AR+ R NS    Y      L RA P  SP  +  GQ ++ V  + G    AGRIYGP C 
Subjt:  MNRRRQISPN---SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSY------LRRAPPMESPAVSPDGQSETDVADVAGDFPLAGRIYGPLCL

Query:  KRKKLAAIKPSWFSISNFQAPTADLTPDPISD
        +RK+LAA K   F      +P  D +PDP+ D
Subjt:  KRKKLAAIKPSWFSISNFQAPTADLTPDPISD

A0A6J1EXJ2 uncharacterized protein LOC111437092

2.4e-18

46.4

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI
        MNRR +  P SS +  E+FHKYLKPGALA++R+SR+ AR  R N +SQ Y  R   +  P    D    + ++ D +  F  AGR+YGPLCL+RKKL A 
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPISDV
        K  WF  S+    T D  PDP+ +V
Subjt:  KPSWFSISNFQAPTADLTPDPISDV

A0A6J1FXV4 uncharacterized protein LOC111448755

8.3e-32

61.65

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        MNRR Q S    ANR E FHKYLKPGALA++RDSRI+AR +R+NSLSQ YLRR    ES  +S  GQSE DV     DFP L+GR+YGPLCLKRKK + I
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PTADL+ D I     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

A0A6J1J6X7 uncharacterized protein LOC111484017

7.5e-33

62.41

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI
        MNRR Q+S    ANR E FHK+LKPGALA++RDSRI+ARS+R+NSLSQ +LRR   +ES  +S  GQSE DV     DFP L+GR+YGPLCLKRKKLA I
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP-LAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH
        K +WF   N Q PT DLT D I     SDVAAH
Subjt:  KPSWFSISNFQAPTADLTPDPI-----SDVAAH

A0A6J1JMJ5 uncharacterized protein LOC111486563

3.6e-19

46.4

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Query:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI
        MNRR +  P SS +  E+FHKYLKPGALA++R+SR+ AR  R N +SQ Y  R+  +  P    D    + ++ D +  F  AGR+YGPLCL+RKKL A 
Subjt:  MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQ-SETDVADVAGDFPLAGRIYGPLCLKRKKLAAI

Query:  KPSWFSISNFQAPTADLTPDPISDV
        K  WF  S+    T D  PDP+ +V
Subjt:  KPSWFSISNFQAPTADLTPDPISDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

4.6e-06

31.07

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Query:  SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP------LAGRIYGPLCLKRKKLAAIKPSWF
        S   R + FH+Y+KPGALA++R++RI       N+ S   L R+  +  P   P   SE+ +A             L  +IYGP  + RKKL   + +  
Subjt:  SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFP------LAGRIYGPLCLKRKKLAAIKPSWF

Query:  SIS
         ++
Subjt:  SIS

AT5G54970.1 unknown protein

1.2e-11

40.16

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Query:  SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAG--------DFP-LAGRIYGPLCLKRKKLAAIKP
        S A R + FH+YLKPGALA++R+SRI ARS   + +S+S L       S  V P   SE  V + A           P L  +IYGP   +RKKLAA + 
Subjt:  SSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAG--------DFP-LAGRIYGPLCLKRKKLAAIKP

Query:  -SWFSISNFQAPTADLTPDPISDVAAH
         S   + N   P   +  +P SDV AH
Subjt:  -SWFSISNFQAPTADLTPDPISDVAAH

Sequences

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CDS sequence

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ATGAATCGCCGCCGTCAAATCTCCCCAAATTCATCTGCAAATCGGCCGGAATCGTTCCACAAGTACTTGAAGCCCGGCGCCTTAGCGCGGTTGCGAGACTCGCGAATCAC
CGCCAGATCGTTCCGATTCAACTCACTCTCTCAGAGCTACCTCCGCCGTGCTCCTCCCATGGAGTCGCCGGCAGTTTCCCCCGACGGTCAATCGGAGACTGACGTGGCTG
ACGTGGCCGGCGACTTTCCTTTGGCAGGGAGGATTTATGGTCCCCTGTGCCTTAAGAGGAAGAAGCTTGCGGCGATTAAGCCTTCGTGGTTTTCGATTTCTAATTTTCAG
GCACCCACTGCAGATTTAACACCAGATCCGATTAGCGATGTTGCTGCGCATTGA

mRNA sequence

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ATTGGCCGCGGTTTTGATTTTCAGTTTCCCTCCACTACGCTCCCGCCTCTCCGATTCATTCTCCCATAAACCCTAACCCTTCACCGATCTTCTTCTCCAATCAGAACCAT
GAATCGCCGCCGTCAAATCTCCCCAAATTCATCTGCAAATCGGCCGGAATCGTTCCACAAGTACTTGAAGCCCGGCGCCTTAGCGCGGTTGCGAGACTCGCGAATCACCG
CCAGATCGTTCCGATTCAACTCACTCTCTCAGAGCTACCTCCGCCGTGCTCCTCCCATGGAGTCGCCGGCAGTTTCCCCCGACGGTCAATCGGAGACTGACGTGGCTGAC
GTGGCCGGCGACTTTCCTTTGGCAGGGAGGATTTATGGTCCCCTGTGCCTTAAGAGGAAGAAGCTTGCGGCGATTAAGCCTTCGTGGTTTTCGATTTCTAATTTTCAGGC
ACCCACTGCAGATTTAACACCAGATCCGATTAGCGATGTTGCTGCGCATTGATTGTGGATTTATATACTACAGTGGATTGACATTTGATTTTGCTCTTGTTCAATGTAAG
TAGATTTTCATGGCTGATTTGTTTCTTGTTGGTCGTTTCTTTCAATTGATTATAGGTTAAATTCTATTCATGCTGCTGATTTGAATAATTATAGTGGAAATTTAACACAG
TGAACTTATCTGCATTTGATCGTTTTGATTATTTGAATCTGATTATTCAGCATTGGATCGTTTCGTTTAGGGGAAATGCCGTCGGGATTAATTTCATTTGAAAATGAAGT
TGGTTCATTTAAAGTATGAAATATAGTCTGTTCATATTATAACTCATATGATGAGTATGTTTTTATTTGTATGTTACATTGTAGTTTTGGTTGATTCATTTATCATAATG
AAGTTGC

Protein sequence

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MNRRRQISPNSSANRPESFHKYLKPGALARLRDSRITARSFRFNSLSQSYLRRAPPMESPAVSPDGQSETDVADVAGDFPLAGRIYGPLCLKRKKLAAIKPSWFSISNFQ
APTADLTPDPISDVAAH

Sed0017131 (gene) of Chayote v1 genome