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Sed0017136 (gene) of Chayote v1 genome

Gene IDSed0017136
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG05:43269481..43269801
RNA-Seq ExpressionSed0017136
SyntenySed0017136
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]1.8e-1352.83Show/hide
Query:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSCNG
        MEPH  S S YY++   + Q   +KA APP  T PP+VYKV PINF+DVVQKLT+ PEF D RLQAMPPP+P+ ++    PR +S     GEG  VS +G
Subjt:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSCNG

Query:  -YLGEN
         +LG++
Subjt:  -YLGEN

KAE7999748.1 hypothetical protein FH972_004151 [Carpinus fangiana]7.9e-0647.44Show/hide
Query:  SSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRS
        S SS+ ++      +P  + A APP    PP+VYKV P+NF+DVVQKLT   EF  PRLQ   PP  S + L P P S
Subjt:  SSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRS

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]6.3e-1151.61Show/hide
Query:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEG
        MEPH  S S YY +     Q   +K  APP  + PP+VYKV PINF+DVVQKLT+ P+F D RLQAMPPP+P  ++     +S+  RD  GEG
Subjt:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEG

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1257.29Show/hide
Query:  MEPH-----FSSSSLYYSE-----SSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASR
        MEPH      SS S YYS+      + +R P  +KA APP    PPRVYKV PI F+DVVQKLTSPPE+LDPRL+AMP P+P+ SN  PPP S+ R
Subjt:  MEPH-----FSSSSLYYSE-----SSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASR

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]1.8e-1048.15Show/hide
Query:  MEPHFSSSSLYYSESSETRQPRLR--KAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSC
        MEPH SSSS           P ++    A  P    PP++YKV+P++F+DVVQKLT+ PEF D RLQAMP P+PS     PPP SA+  DF GEG +V  
Subjt:  MEPHFSSSSLYYSESSETRQPRLR--KAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSC

Query:  NGYLGENY
         GY G  +
Subjt:  NGYLGENY

TrEMBL top hitse value%identityAlignment
A0A0A0LPS3 VQ domain-containing protein8.3e-0955.71Show/hide
Query:  RKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEG
        +K  APP  + PP+VYKV PINF+DVVQKLT+ P+F D RLQAMPPP+P  ++     +S+  RD  GEG
Subjt:  RKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEG

A0A5A7TW54 VQ motif-containing protein 298.5e-1452.83Show/hide
Query:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSCNG
        MEPH  S S YY++   + Q   +KA APP  T PP+VYKV PINF+DVVQKLT+ PEF D RLQAMPPP+P+ ++    PR +S     GEG  VS +G
Subjt:  MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSCNG

Query:  -YLGEN
         +LG++
Subjt:  -YLGEN

A0A5N6QK65 VQ domain-containing protein3.8e-0647.44Show/hide
Query:  SSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRS
        S SS+ ++      +P  + A APP    PP+VYKV P+NF+DVVQKLT   EF  PRLQ   PP  S + L P P S
Subjt:  SSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRS

A0A6J1D7B4 VQ motif-containing protein 298.8e-1148.15Show/hide
Query:  MEPHFSSSSLYYSESSETRQPRLR--KAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSC
        MEPH SSSS           P ++    A  P    PP++YKV+P++F+DVVQKLT+ PEF D RLQAMP P+PS     PPP SA+  DF GEG +V  
Subjt:  MEPHFSSSSLYYSESSETRQPRLR--KAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSC

Query:  NGYLGENY
         GY G  +
Subjt:  NGYLGENY

A0A7J6FZD7 VQ domain-containing protein1.5e-0544.33Show/hide
Query:  FSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEF-LDPRLQAMPPPQPSQSNLPPPPRSA---SRRDFPGEGRSVS
        + SSSL+  + + T +P  +  A  P +  PPRVY+V PINF+D+VQKLT+ PEF LDP  Q  P PQ    +L PPP  A     R  P +  S+S
Subjt:  FSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEF-LDPRLQAMPPPQPSQSNLPPPPRSA---SRRDFPGEGRSVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCACTTTTCTTCTTCTTCTCTTTACTACTCCGAATCGTCCGAGACTCGCCAGCCGCGGTTGAGAAAGGCTGCGGCGCCTCCGTCTTCAACACCGCCGCCGCG
GGTTTACAAGGTCCACCCTATCAACTTCCAGGATGTTGTTCAGAAGCTAACTTCACCGCCCGAGTTTTTAGATCCCCGTCTTCAAGCCATGCCGCCTCCCCAGCCGAGTC
AGTCCAACCTGCCTCCGCCTCCGCGTTCTGCCAGCCGCCGGGATTTTCCCGGCGAGGGACGCTCTGTTTCTTGCAATGGATACTTAGGAGAGAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTCACTTTTCTTCTTCTTCTCTTTACTACTCCGAATCGTCCGAGACTCGCCAGCCGCGGTTGAGAAAGGCTGCGGCGCCTCCGTCTTCAACACCGCCGCCGCG
GGTTTACAAGGTCCACCCTATCAACTTCCAGGATGTTGTTCAGAAGCTAACTTCACCGCCCGAGTTTTTAGATCCCCGTCTTCAAGCCATGCCGCCTCCCCAGCCGAGTC
AGTCCAACCTGCCTCCGCCTCCGCGTTCTGCCAGCCGCCGGGATTTTCCCGGCGAGGGACGCTCTGTTTCTTGCAATGGATACTTAGGAGAGAATTACTAG
Protein sequenceShow/hide protein sequence
MEPHFSSSSLYYSESSETRQPRLRKAAAPPSSTPPPRVYKVHPINFQDVVQKLTSPPEFLDPRLQAMPPPQPSQSNLPPPPRSASRRDFPGEGRSVSCNGYLGENY