; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017146 (gene) of Chayote v1 genome

Gene IDSed0017146
OrganismSechium edule (Chayote v1)
DescriptionSuperoxide dismutase [Cu-Zn]
Genome locationLG11:2387313..2391086
RNA-Seq ExpressionSed0017146
SyntenySed0017146
Gene Ontology termsGO:0019430 - removal of superoxide radicals (biological process)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR001424 - Superoxide dismutase, copper/zinc binding domain
IPR018152 - Superoxide dismutase, copper/zinc, binding site
IPR024134 - Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
IPR036423 - Superoxide dismutase-like, copper/zinc binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599281.1 Superoxide dismutase [Cu-Zn] 1, partial [Cucurbita argyrosperma subsp. sororia]4.9e-6294.49Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL  GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVG NSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

KAG7030279.1 Superoxide dismutase [Cu-Zn] 1 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-6395.28Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL  GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

XP_022150819.1 superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia]3.8e-6292.91Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTVTGNISGL AGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAP+D+NRHVGDLGNLVAGDDGTATFSIIDKQISLV PNS++GR+IVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

XP_022946180.1 superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata]4.9e-6294.49Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL  GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVG NSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

XP_022999148.1 superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima]3.4e-6395.28Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL+ GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

TrEMBL top hitse value%identityAlignment
A0A0A0LIH2 Superoxide dismutase [Cu-Zn]6.9e-6292.91Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPT +TGNISGL AGLHGFHVHALGDTTNGC STGPHFNPEGKDHGAPDD+NRHVGDLGN+VAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG TELSLTTGNAGER  CGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

A0A6J1D9J5 Superoxide dismutase [Cu-Zn]1.8e-6292.91Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTVTGNISGL AGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAP+D+NRHVGDLGNLVAGDDGTATFSIIDKQISLV PNS++GR+IVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

A0A6J1G334 Superoxide dismutase [Cu-Zn]2.4e-6294.49Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL  GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVG NSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

A0A6J1KC95 Superoxide dismutase9.0e-6292.37Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL+ GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTAC----GVIGLQE
        GRG+TELSLTTGNAGER AC    GVIGLQE
Subjt:  GRGRTELSLTTGNAGERTAC----GVIGLQE

A0A6J1KIS8 Superoxide dismutase [Cu-Zn]1.6e-6395.28Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV GNISGL+ GLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDD+NRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQE
        GRG+TELSLTTGNAGER ACGVIGLQE
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQE

SwissProt top hitse value%identityAlignment
P09678 Superoxide dismutase [Cu-Zn]1.9e-5376.19Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G TTVTG +SGL  GLHGFHVHALGD TNGC STGPHFNP+GK HGAP+D NRH GDLGN++ GDDGTATF+I D QI L GPNS++GR+IVVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        G+G  ELSL+TGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

P22233 Superoxide dismutase [Cu-Zn]3.0e-5476.98Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTVTGN+SGL  GLHGFHVHALGDTTNGC STGPH+NP GK+HGAP+D  RH GDLGN+  GDDGTATF+IID QI L GPNS++GR++VVHA+PDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        GRG  ELS TTGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

P93258 Superoxide dismutase [Cu-Zn] 12.7e-5578.57Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTVTGN+SGL  GLHGFHVHALGDTTNGC STGPHFNP GK+HGAP+D+ RH GDLGN+  GDDGTATF+IID QI L GPNS++GR++VVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        GRG  ELS  TGNAG R ACGVIGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

Q42611 Superoxide dismutase [Cu-Zn] 18.7e-5476.98Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G TTVTG +SGL  GLHGFHVHALGDTTNGC STGPHFNPEGK HGAP+D NRH GDLGN+  GDDGTATF+I D QI L GPNS++GR++VVHA+PDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        G+G  ELSLTTGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

Q8L5E0 Superoxide dismutase [Cu-Zn] 22.5e-5374.6Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTVTGN+SGL  GLHGFHVHALGDTTNGC STGPHFNP GK+HGAP D+NRH GDLGN+  G+DGTA  +I+DKQI L GP+S++GR++VVH+DPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        GRG  ELS +TGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

Arabidopsis top hitse value%identityAlignment
AT1G08830.1 copper/zinc superoxide dismutase 16.8e-5475.4Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G TTV+G +SGL  GLHGFHVHALGDTTNGC STGPHFNP+GK HGAP+D NRH GDLGN+  GDDGTATF+I D QI L GPNS++GR++VVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        G+G  ELSL TGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

AT1G08830.2 copper/zinc superoxide dismutase 16.8e-5475.4Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G TTV+G +SGL  GLHGFHVHALGDTTNGC STGPHFNP+GK HGAP+D NRH GDLGN+  GDDGTATF+I D QI L GPNS++GR++VVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        G+G  ELSL TGNAG R ACG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

AT2G28190.1 copper/zinc superoxide dismutase 25.4e-4366.4Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        GPTTV   I+GL  G HGFH+H  GDTTNGC STGPHFNP    HGAP+D+ RH GDLGN+ A  DG A  +I+D QI L GPNSV+GR+ VVH   DDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGL
        G+G  ELSLTTGNAG R ACGVIGL
Subjt:  GRGRTELSLTTGNAGERTACGVIGL

AT5G18100.1 copper/zinc superoxide dismutase 35.4e-4362.7Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G T VTG ISGL  G HGFH+H+ GDTTNGC STGPHFNP  + HG P+++ RH GDLGN++AG +G A   I DK I L G  S+LGR++VVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRGRTELSLTTGNAGERTACGVIGLQ
        G+G  +LS +TGNAG R  CG+IGLQ
Subjt:  GRGRTELSLTTGNAGERTACGVIGLQ

AT5G18100.2 copper/zinc superoxide dismutase 32.1e-3463.11Show/hide
Query:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL
        G T VTG ISGL  G HGFH+H+ GDTTNGC STGPHFNP  + HG P+++ RH GDLGN++AG +G A   I DK I L G  S+LGR++VVHADPDDL
Subjt:  GPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDL

Query:  GRG
        G+G
Subjt:  GRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCGCTACTTCAGTGTTCTCTTCATCTCTTCTCTTTCGACTCCATTGAAGAAATTCTGCGGTCCAACTACAGTTACAGGAAATATTTCTGGCCTTATGGCAGGGCT
TCATGGCTTCCATGTTCATGCCCTTGGAGACACAACCAATGGTTGCTCATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCTGATGATCAGAATC
GTCATGTTGGTGATCTTGGAAATTTAGTTGCTGGTGATGATGGGACTGCAACTTTCTCTATTATTGACAAGCAGATTTCTCTCGTTGGACCAAATTCCGTTCTTGGAAGG
TCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTCGAACCGAACTTAGCTTAACCACTGGCAATGCGGGCGAGAGAACAGCTTGTGGCGTTATTGGGCTGCA
AGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACCGCTACTTCAGTGTTCTCTTCATCTCTTCTCTTTCGACTCCATTGAAGAAATTCTGCGGTCCAACTACAGTTACAGGAAATATTTCTGGCCTTATGGCAGGGCT
TCATGGCTTCCATGTTCATGCCCTTGGAGACACAACCAATGGTTGCTCATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCTGATGATCAGAATC
GTCATGTTGGTGATCTTGGAAATTTAGTTGCTGGTGATGATGGGACTGCAACTTTCTCTATTATTGACAAGCAGATTTCTCTCGTTGGACCAAATTCCGTTCTTGGAAGG
TCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTCGAACCGAACTTAGCTTAACCACTGGCAATGCGGGCGAGAGAACAGCTTGTGGCGTTATTGGGCTGCA
AGAGTGA
Protein sequenceShow/hide protein sequence
MHRYFSVLFISSLSTPLKKFCGPTTVTGNISGLMAGLHGFHVHALGDTTNGCSSTGPHFNPEGKDHGAPDDQNRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGR
SIVVHADPDDLGRGRTELSLTTGNAGERTACGVIGLQE