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Sed0017148 (gene) of Chayote v1 genome

Gene IDSed0017148
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR2
Genome locationLG07:40681631..40681834
RNA-Seq ExpressionSed0017148
SyntenySed0017148
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7996760.1 hypothetical protein FH972_001453 [Carpinus fangiana]8.8e-1160.34Show/hide
Query:  CRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        C TPR   CR+P A  CP AP+KKPV  K++APPK GYF+PPDLEALF  V+ +G  C
Subjt:  CRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
KAE8647993.1 hypothetical protein Csa_021483 [Cucumis sativus]1.7e-2281.82Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        MAEET ++CRTPRRRSCRIPVA  CP+APRKKPVCLKRKAPPK GYFR PDLE LFGFV P+ EAC
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
KAF0911031.1 hypothetical protein E2562_005419 [Oryza meyeriana var. granulata]8.8e-1154.29Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
        M E+      TPRR  CRIPV PPCPA PRK+PV L     +R+ PPK GYF+PPDLE+LF    P+ +A
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
KAG6600042.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2081.25Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGE
        MAEE  D+CRTPRR+SCRIPVA  CPAAPRKK V LKRKAPPK GYFRPPDLE LFGFVAP+G+
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGE
XP_021655298.1 cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis]2.1e-1266.67Show/hide
Query:  DVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        +VC TPRRR  RIP A  CP APRKKPV  K+++PPK GYF+PPDLEALF  +AP+ EAC
Subjt:  DVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
TrEMBL top hitse value%identityAlignment
A0A0A0KS84 Uncharacterized protein8.3e-2381.82Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        MAEET ++CRTPRRRSCRIPVA  CP+APRKKPVCLKRKAPPK GYFR PDLE LFGFV P+ EAC
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
A0A0D9W0U2 Uncharacterized protein9.5e-1160Show/hide
Query:  TPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
        TPRR  CRIPV PPCPA PRK+PV L     +R+ PPK GYF+PPDLE+LF    P+ +A
Subjt:  TPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
A0A5N6QF01 Uncharacterized protein4.3e-1160.34Show/hide
Query:  CRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        C TPR   CR+P A  CP AP+KKPV  K++APPK GYF+PPDLEALF  V+ +G  C
Subjt:  CRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
A0A6G1DF41 Uncharacterized protein4.3e-1154.29Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
        M E+      TPRR  CRIPV PPCPA PRK+PV L     +R+ PPK GYF+PPDLE+LF    P+ +A
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
J3LU95 Uncharacterized protein1.6e-1054.41Show/hide
Query:  EETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
        EE      TPRR  CRIPV PPCP  PRK+PV L     +R+ PPK GYF+PPDLE+LF    P+ +A
Subjt:  EETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCL-----KRKAPPKAGYFRPPDLEALFGFVAPKGEA
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR44.6e-1053.03Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        MAEE    C TPR    RIPVA  CP  PRKK + ++++ PP+ GYF+PPDLE LF +  P+ EAC
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR57.3e-0852.73Show/hide
Query:  CRTPRRRSCRIPVAPPCPAAPRKKPVCL---KRKAPPKAGYFRPPDLEALFGFVA
        C TP R  CRIP  PPCP   R+K   L   K++ PPK GYF+PPDL+  F  VA
Subjt:  CRTPRRRSCRIPVAPPCPAAPRKKPVCL---KRKAPPKAGYFRPPDLEALFGFVA
Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein2.2e-0449.09Show/hide
Query:  ETADVC-RTPRRRSCRIPVAPPCPAAPRKKPVCLK-RKAPPKAGYFRPPDLEALF
        E  D C  TP   S RIP  PPCPAAP+K+   LK         YF PPDLE +F
Subjt:  ETADVC-RTPRRRSCRIPVAPPCPAAPRKKPVCLK-RKAPPKAGYFRPPDLEALF
AT1G60783.1 unknown protein1.7e-0446.3Show/hide
Query:  ETADVC-RTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALF
        E  D+C  TP   S RIP   PCP AP+K+ + LK    P+  +F PPDLE +F
Subjt:  ETADVC-RTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALF
AT5G02220.1 unknown protein3.2e-1153.03Show/hide
Query:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC
        MAEE    C TPR    RIPVA  CP  PRKK + ++++ PP+ GYF+PPDLE LF +  P+ EAC
Subjt:  MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEAC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGAGACGGCGGATGTCTGCCGGACGCCGCGACGGAGGAGCTGCAGGATTCCGGTGGCGCCGCCGTGTCCGGCGGCGCCGAGGAAGAAGCCGGTTTGCTTGAA
GCGGAAGGCTCCGCCGAAGGCGGGGTATTTTCGACCGCCGGATTTGGAGGCTTTGTTCGGCTTTGTTGCTCCAAAAGGAGAGGCTTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGAGACGGCGGATGTCTGCCGGACGCCGCGACGGAGGAGCTGCAGGATTCCGGTGGCGCCGCCGTGTCCGGCGGCGCCGAGGAAGAAGCCGGTTTGCTTGAA
GCGGAAGGCTCCGCCGAAGGCGGGGTATTTTCGACCGCCGGATTTGGAGGCTTTGTTCGGCTTTGTTGCTCCAAAAGGAGAGGCTTGTGGTTGA
Protein sequenceShow/hide protein sequence
MAEETADVCRTPRRRSCRIPVAPPCPAAPRKKPVCLKRKAPPKAGYFRPPDLEALFGFVAPKGEACG