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Sed0017161 (gene) of Chayote v1 genome

Gene IDSed0017161
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:8680518..8680916
RNA-Seq ExpressionSed0017161
SyntenySed0017161
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]6.2e-0832Show/hide
Query:  WTMKKKLGVEESNGTLVL-EENEQMKVKYNLLEMWPWEKVRTVMKDYENGVEITLFDIKRFKYTKTCMKRVRSQTHEIFHINWDIEGAGYVLGDEIRMYW
        WTM KKL   + NG L L E++E   ++ NL   WP  KVR + +   + V I L+D+   +  +T M+ +       +HI WDI+   Y  GD++ M+W
Subjt:  WTMKKKLGVEESNGTLVL-EENEQMKVKYNLLEMWPWEKVRTVMKDYENGVEITLFDIKRFKYTKTCMKRVRSQTHEIFHINWDIEGAGYVLGDEIRMYW

Query:  HKHDRELYYMVVGKSKAPTPSTLCT
              L Y ++ ++  P  S  C+
Subjt:  HKHDRELYYMVVGKSKAPTPSTLCT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGAAATCATTGTGGACAATGAAAAAGAAGCTAGGGGTAGAAGAGTCAAATGGAACATTGGTGTTGGAAGAAAATGAACAAATGAAGGTTAAATACAATTTACT
AGAAATGTGGCCATGGGAGAAAGTGAGGACAGTGATGAAGGACTATGAGAATGGAGTGGAAATCACTTTGTTTGATATCAAGAGATTCAAATACACCAAAACATGCATGA
AGAGGGTTAGATCACAAACTCATGAAATATTTCATATTAATTGGGACATTGAAGGAGCTGGCTATGTGTTGGGAGATGAGATTCGTATGTATTGGCATAAACACGATCGA
GAGTTATACTACATGGTAGTCGGAAAAAGCAAAGCTCCAACACCATCAACATTATGTACGATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGAAATCATTGTGGACAATGAAAAAGAAGCTAGGGGTAGAAGAGTCAAATGGAACATTGGTGTTGGAAGAAAATGAACAAATGAAGGTTAAATACAATTTACT
AGAAATGTGGCCATGGGAGAAAGTGAGGACAGTGATGAAGGACTATGAGAATGGAGTGGAAATCACTTTGTTTGATATCAAGAGATTCAAATACACCAAAACATGCATGA
AGAGGGTTAGATCACAAACTCATGAAATATTTCATATTAATTGGGACATTGAAGGAGCTGGCTATGTGTTGGGAGATGAGATTCGTATGTATTGGCATAAACACGATCGA
GAGTTATACTACATGGTAGTCGGAAAAAGCAAAGCTCCAACACCATCAACATTATGTACGATTGTTTAA
Protein sequenceShow/hide protein sequence
MIKKSLWTMKKKLGVEESNGTLVLEENEQMKVKYNLLEMWPWEKVRTVMKDYENGVEITLFDIKRFKYTKTCMKRVRSQTHEIFHINWDIEGAGYVLGDEIRMYWHKHDR
ELYYMVVGKSKAPTPSTLCTIV