; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017197 (gene) of Chayote v1 genome

Gene IDSed0017197
OrganismSechium edule (Chayote v1)
Descriptioncentromere protein S isoform X2
Genome locationLG01:11116667..11118899
RNA-Seq ExpressionSed0017197
SyntenySed0017197
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0007129 - synapsis (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold
IPR029003 - CENP-S/Mhf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573152.1 Protein MHF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4882.17Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKDLELFAHHGGRK+ NTEDVILS HRNEHLAASL+SFC++LK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK+E  D+  +HITDA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

KAG7012337.1 Protein MHF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]5.8e-4982.95Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKDLELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK+E  D+  +HITDA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

XP_004154006.1 protein MHF1 homolog isoform X2 [Cucumis sativus]7.6e-4981.4Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDS ++LLRDRFRLS+I IAEA+A KSGMEISEPVMTCVA+LAFKYTKQLAKDLELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK++DRDRG VHI DA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

XP_008440159.1 PREDICTED: centromere protein S isoform X2 [Cucumis melo]1.3e-4880.62Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKDLELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
         KEPQS  KRKKAPK++DRDRG VHI +A
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

XP_022994496.1 protein MHF1 homolog [Cucurbita maxima]5.8e-4982.95Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKDLELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK+E  D+  +HITDA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

TrEMBL top hitse value%identityAlignment
A0A0A0LR97 Uncharacterized protein3.7e-4981.4Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDS ++LLRDRFRLS+I IAEA+A KSGMEISEPVMTCVA+LAFKYTKQLAKDLELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK++DRDRG VHI DA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

A0A1S3B173 centromere protein S isoform X26.3e-4980.62Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKDLELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
         KEPQS  KRKKAPK++DRDRG VHI +A
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

A0A5D3BHQ8 Centromere protein S isoform X26.3e-4980.62Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        METR+EEDDS ++LLRDRFRLSTI IAEA+A KSGMEISEPVMTCVA+LAFK+TKQLAKDLELFA H GRK+ NTEDVIL+AHRNEHLAA L S CNDLK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
         KEPQS  KRKKAPK++DRDRG VHI +A
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

A0A6J1GTB4 protein MHF1 homolog1.8e-4882.17Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDSTA+LLR RFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKDLELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK+E  D+  +HITDA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

A0A6J1JZB0 protein MHF1 homolog2.8e-4982.95Show/hide
Query:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK
        MET +EEDDSTA+LLRDRFRLS I IAEA+AK+SGMEIS PVMTCVAELAFKYTKQLAKDLELFAHHGGRK+ NTEDVILSAHRNEHLAASL+SFC++LK
Subjt:  METRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLK

Query:  TKEPQS-GKRKKAPKREDRDRGVVHITDA
        TKEPQS  KRKKAPK+E  D+  +HITDA
Subjt:  TKEPQS-GKRKKAPKREDRDRGVVHITDA

SwissProt top hitse value%identityAlignment
E1BSW7 Centromere protein S2.4e-0526.92Show/hide
Query:  EEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHL-------AASLASFCND
        E+ +     LR     +T  + +  A+  G+  S+  +  ++E+ F+  +  A+DLE+FA H  R T  +EDV L A R+  L       +  LAS   +
Subjt:  EEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHL-------AASLASFCND

Query:  LKTKEPQSGKRKKAPKREDRDRGVVHITDA
         K K+ +     K  K E+ +  V    D+
Subjt:  LKTKEPQSGKRKKAPKREDRDRGVVHITDA

Q2TBR7 Centromere protein S3.4e-0733.98Show/hide
Query:  IAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDRGVVHI
        + E  A    M+ S+  +  ++E+ F   +  AKDLE+FA H  R T NTEDV L A R+  L   +     D+     +  K KK  K ED +R  V  
Subjt:  IAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDRGVVHI

Query:  TDA
         +A
Subjt:  TDA

Q8N2Z9 Centromere protein S3.7e-0630.83Show/hide
Query:  ETRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKT
        ET  ++  S    L+     +   + E  A    M+ S+  +  ++EL F+  +  AKDLE+FA H  R T NTEDV L A R+     SL  +  D   
Subjt:  ETRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKT

Query:  KEPQSGKRKKAPKREDRDRG
        +  Q    +KA K++  + G
Subjt:  KEPQSGKRKKAPKREDRDRG

Q9D084 Centromere protein S4.1e-0536.47Show/hide
Query:  MEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDR
        +  S+  +  ++E+ F+  +  AKDLE+FA H  R T  TEDV L A RN  L   +    N+   +    GK KK  K ED  R
Subjt:  MEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKEPQSGKRKKAPKREDRDR

Q9FI55 Protein MHF1 homolog8.5e-3564.1Show/hide
Query:  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKE
        +I E+ S  DL+RDRFRLS I IAEA+AKK+GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK  N +DV+LSAHRN++LAASL S CN+LK KE
Subjt:  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKE

Query:  PQSGKRKK--APKREDR
        PQS +++K  + K+ED+
Subjt:  PQSGKRKK--APKREDR

Arabidopsis top hitse value%identityAlignment
AT5G50930.1 Histone superfamily protein6.0e-3664.1Show/hide
Query:  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKE
        +I E+ S  DL+RDRFRLS I IAEA+AKK+GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK  N +DV+LSAHRN++LAASL S CN+LK KE
Subjt:  RIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDLKTKE

Query:  PQSGKRKK--APKREDR
        PQS +++K  + K+ED+
Subjt:  PQSGKRKK--APKREDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCCAAGTGAAGTTGTTAAAGGCTCTTCAATGGAGACCAGGATCGAAGAAGACGACTCCACGGCCGACCTCTTGAGGGACCGATTCCGGCTCTCCACCATTTTCAT
CGCTGAAGCTCAAGCGAAGAAAAGCGGCATGGAAATCTCTGAACCGGTCATGACTTGTGTCGCTGAGTTAGCCTTCAAATATACAAAACAGTTGGCAAAAGACCTTGAGT
TATTTGCTCATCATGGTGGTCGAAAAACTGCGAATACAGAAGACGTCATACTCTCAGCCCATAGAAATGAACATCTGGCTGCCTCATTAGCATCTTTCTGCAACGATTTA
AAGACAAAAGAACCTCAAAGTGGAAAACGGAAAAAGGCACCGAAAAGGGAAGATAGAGATCGAGGTGTCGTGCATATTACTGATGCATAA
mRNA sequenceShow/hide mRNA sequence
AAGCCGTCCCGGTTGCGAGTGCCATTTCTGGAGGGAATAAAAGGCAGATGGAAACAGATGCACCCAAGTGAAGTTGTTAAAGGCTCTTCAATGGAGACCAGGATCGAAGA
AGACGACTCCACGGCCGACCTCTTGAGGGACCGATTCCGGCTCTCCACCATTTTCATCGCTGAAGCTCAAGCGAAGAAAAGCGGCATGGAAATCTCTGAACCGGTCATGA
CTTGTGTCGCTGAGTTAGCCTTCAAATATACAAAACAGTTGGCAAAAGACCTTGAGTTATTTGCTCATCATGGTGGTCGAAAAACTGCGAATACAGAAGACGTCATACTC
TCAGCCCATAGAAATGAACATCTGGCTGCCTCATTAGCATCTTTCTGCAACGATTTAAAGACAAAAGAACCTCAAAGTGGAAAACGGAAAAAGGCACCGAAAAGGGAAGA
TAGAGATCGAGGTGTCGTGCATATTACTGATGCATAACCACATCACCCACTTGGCAGATCTCTTGTTACAAAGGGTACATACTAAGTAATGACAATATTTTATGATTCTC
TTCCTGTTTCTAGGATTCTTTTTAATATAGTGGATCATCCACCAGACTTTTGTTCTCATCTCCTTAGAACTCAAGGACAACATAGAACATATAAAGAAACCTTGTTGTTT
ATTGATTCCTAGGTTTCAAAATTGAACTATTTTACCTTCTTGGACTAATTTTATGTAGTTGAGAATTGAGATGGGGAATCTATAGATTACTGTCTAAAGACATGAGAACA
AATCTTGTTCAAGG
Protein sequenceShow/hide protein sequence
MHPSEVVKGSSMETRIEEDDSTADLLRDRFRLSTIFIAEAQAKKSGMEISEPVMTCVAELAFKYTKQLAKDLELFAHHGGRKTANTEDVILSAHRNEHLAASLASFCNDL
KTKEPQSGKRKKAPKREDRDRGVVHITDA