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Sed0017207 (gene) of Chayote v1 genome

Gene IDSed0017207
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationLG12:5126063..5126677
RNA-Seq ExpressionSed0017207
SyntenySed0017207
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049489.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa]1.2e-3972.65Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADV---GGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYD
        MSGVWIFDNGVIRLV+R G  +      SGGS +RK VLMY PT+EAMTS+ VL+NKL  LGWE+YYED E++QFHK  SVDLISLP DFNK+KARHLYD
Subjt:  MSGVWIFDNGVIRLVDRPGKADV---GGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYD

Query:  VVVKNRNLFQVKDMHSH
        +VV+NRNLFQVKDM SH
Subjt:  VVVKNRNLFQVKDMHSH

KGN57101.1 hypothetical protein Csa_010574 [Cucumis sativus]8.2e-4174.56Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVWIFDNGVIRLV+R G A+   SGGS +RK VL+Y PT+EAMTS+ VL+NKL  LGWE+YYED E++QFHK  SVDLISLP DFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHSH
        +NRNLFQVKDM SH
Subjt:  KNRNLFQVKDMHSH

XP_022956217.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]6.3e-4173.45Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRLV+R G A+ G  G    R++VL+Y PT+EAMTS+ VLKNKL SLGWE+YYEDSE++QFHK  SVDLIS+PTDFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        KNRN+FQVKDM S
Subjt:  KNRNLFQVKDMHS

XP_022979994.1 flowering-promoting factor 1-like protein 1 [Cucurbita maxima]1.1e-4072.57Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRLV+R G  + G  G    R++VL+Y PT+EAMTS++VLKNKL SLGWE+YYEDSE++QFHK  SVDLIS+PTDFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        KNRN+FQVKDM S
Subjt:  KNRNLFQVKDMHS

XP_023528953.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]1.1e-4072.57Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRLV+R G A+ G  G    R++VL+Y PT+EAMTS+ +LKNKL SLGWE+YYEDSE++QFHK  SVDLIS+PTDFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        KNRN+FQVKDM S
Subjt:  KNRNLFQVKDMHS

TrEMBL top hitse value%identityAlignment
A0A0A0LAK6 Uncharacterized protein4.0e-4174.56Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVWIFDNGVIRLV+R G A+   SGGS +RK VL+Y PT+EAMTS+ VL+NKL  LGWE+YYED E++QFHK  SVDLISLP DFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHSH
        +NRNLFQVKDM SH
Subjt:  KNRNLFQVKDMHSH

A0A5A7U7L7 Flowering-promoting factor 1-like protein 35.7e-4072.65Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADV---GGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYD
        MSGVWIFDNGVIRLV+R G  +      SGGS +RK VLMY PT+EAMTS+ VL+NKL  LGWE+YYED E++QFHK  SVDLISLP DFNK+KARHLYD
Subjt:  MSGVWIFDNGVIRLVDRPGKADV---GGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYD

Query:  VVVKNRNLFQVKDMHSH
        +VV+NRNLFQVKDM SH
Subjt:  VVVKNRNLFQVKDMHSH

A0A6J1GVQ4 flowering-promoting factor 1-like protein 13.0e-4173.45Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRLV+R G A+ G  G    R++VL+Y PT+EAMTS+ VLKNKL SLGWE+YYEDSE++QFHK  SVDLIS+PTDFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        KNRN+FQVKDM S
Subjt:  KNRNLFQVKDMHS

A0A6J1IC95 flowering-promoting factor 1-like protein 21.8e-3873.45Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRL +       GG G   R + VL+Y  T+EAMT+ TVLKNKLLSLGWEIYYED+EIVQFHK  SVDLISLPTDFNK+KARHLYDVVV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        +NRNLF VKDM S
Subjt:  KNRNLFQVKDMHS

A0A6J1IY48 flowering-promoting factor 1-like protein 15.2e-4172.57Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV
        MSGVW+FDNGVIRLV+R G  + G  G    R++VL+Y PT+EAMTS++VLKNKL SLGWE+YYEDSE++QFHK  SVDLIS+PTDFNK+KARHLYD+VV
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVV

Query:  KNRNLFQVKDMHS
        KNRN+FQVKDM S
Subjt:  KNRNLFQVKDMHS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 19.1e-2751.75Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV
        MSGVW+F NGVIRLV+ P ++   GS    RRK V++Y+PT E ++S++ L+  L SLGWE Y+   D++++QFHK  S+DLISLP DF K  + ++YD+
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV

Query:  VVKNRNLFQVKDMH
        VVKN N F V+D H
Subjt:  VVKNRNLFQVKDMH

O24340 Flowering-promoting factor 12.0e-2651.79Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV
        MSGVW+F NGVIRLV+ P ++  GG   SRR+  V++Y+PT E ++S++ L+  L SLGWE Y+   D++++QFHK  S+DLISLP DF K  + ++YD+
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV

Query:  VVKNRNLFQVKD
        VVKN N F V+D
Subjt:  VVKNRNLFQVKD

Q0E1D7 Flowering-promoting factor 1-like protein 37.7e-2645.54Show/hide
Query:  MSGVWIFDNGVIRLVDRPG--KADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV
        M+GVW+F +G++R V+ PG  ++   G GG   R++VL+++P+ E + S+ VL+ +L  LGWE Y  D  ++QFH+  +V LIS+P DF+K K  H+YD+
Subjt:  MSGVWIFDNGVIRLVDRPG--KADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV

Query:  VVKNRNLFQVKD
        VVK RN+F+V+D
Subjt:  VVKNRNLFQVKD

Q8LR63 Flowering-promoting factor 1-like protein 22.2e-2545.67Show/hide
Query:  MSGVWIFDNGVIRLVDRP--------GKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYED--------SEIVQFHKHCSVDLISLP
        MSGVW+F NGV++LV+ P        G    GG GG   R++ L+++PT E +TS+  L+ KL +LGWE YY          + ++QFHK  SVDLISLP
Subjt:  MSGVWIFDNGVIRLVDRP--------GKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYED--------SEIVQFHKHCSVDLISLP

Query:  TDFNKIKARHLYDVVVKNRNLFQVKDM
         DF++  + H+YD+VVKNR+ F+V D+
Subjt:  TDFNKIKARHLYDVVVKNRNLFQVKDM

Q9LXB5 Flowering-promoting factor 1-like protein 21.1e-2752.21Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYE-DSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVV
        MSGVW+F+NGVIRLV+ P ++  G S  S  R+ VL+Y+PT EA++S++ L+  L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + ++YD+V
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYE-DSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVV

Query:  VKNRNLFQVKDMH
        VKN N F V+D +
Subjt:  VKNRNLFQVKDMH

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 13.0e-2545.97Show/hide
Query:  MSGVWIFD-NGVIRLVDRPGKADVG------GSGGS---RRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY---EDSEIVQFHKHCSVDLISLPTDF
        MSGVW+F+ NGV+RLV+ P     G       SGG+   R R+++L+++P+ E ++S+  L+  L +LGWE YY       ++QFHK  S+DLISLP DF
Subjt:  MSGVWIFD-NGVIRLVDRPGKADVG------GSGGS---RRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY---EDSEIVQFHKHCSVDLISLPTDF

Query:  NKIKARHLYDVVVKNRNLFQVKDM
        +K  + H+YD+VVKN N+F V+DM
Subjt:  NKIKARHLYDVVVKNRNLFQVKDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)7.7e-2952.21Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYE-DSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVV
        MSGVW+F+NGVIRLV+ P ++  G S  S  R+ VL+Y+PT EA++S++ L+  L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + ++YD+V
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYE-DSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVV

Query:  VKNRNLFQVKDMH
        VKN N F V+D +
Subjt:  VKNRNLFQVKDMH

AT5G24860.1 flowering promoting factor 16.5e-2851.75Show/hide
Query:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV
        MSGVW+F NGVIRLV+ P ++   GS    RRK V++Y+PT E ++S++ L+  L SLGWE Y+   D++++QFHK  S+DLISLP DF K  + ++YD+
Subjt:  MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYY--EDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDV

Query:  VVKNRNLFQVKDMH
        VVKN N F V+D H
Subjt:  VVKNRNLFQVKDMH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCGTCTGGATTTTCGACAACGGCGTGATCCGGCTAGTCGATAGGCCAGGGAAGGCGGACGTCGGAGGAAGTGGCGGCAGTCGGCGGAGGAAGGAAGTTTTGAT
GTACATTCCGACGGACGAGGCGATGACGTCGCACACGGTGCTTAAGAACAAGTTGTTAAGTTTGGGATGGGAAATTTACTATGAAGATTCAGAGATCGTTCAGTTTCATA
AGCATTGTTCAGTGGACCTTATTTCCCTTCCCACAGACTTCAACAAGATCAAGGCCAGGCACTTATACGACGTCGTTGTTAAGAATCGTAACCTTTTTCAAGTTAAGGAC
ATGCACTCCCATTAA
mRNA sequenceShow/hide mRNA sequence
CTTACACATTAGTTCCCTATAATATCTCTTCCAAAAAAAACATAGAATGTCTGGCGTCTGGATTTTCGACAACGGCGTGATCCGGCTAGTCGATAGGCCAGGGAAGGCGG
ACGTCGGAGGAAGTGGCGGCAGTCGGCGGAGGAAGGAAGTTTTGATGTACATTCCGACGGACGAGGCGATGACGTCGCACACGGTGCTTAAGAACAAGTTGTTAAGTTTG
GGATGGGAAATTTACTATGAAGATTCAGAGATCGTTCAGTTTCATAAGCATTGTTCAGTGGACCTTATTTCCCTTCCCACAGACTTCAACAAGATCAAGGCCAGGCACTT
ATACGACGTCGTTGTTAAGAATCGTAACCTTTTTCAAGTTAAGGACATGCACTCCCATTAATTAATGCAATGTTTAATTTTGGTCTTTAATTTCTGTTTCGATAATGTTG
TCAATTATTATTAATTCGTACATTGTGTTTTTAAGTGCATGTGTTTGAAAGTGAGTCAATTTATGAGGCTGAAAACCAAGTCTTTTTGTTACGTATTACAGCATGTCTAA
ATATGTACGACACTTTGTCATCTTCGTATGTCTAGTTCTTGGACAATTCCAAATTTTTATAAGAG
Protein sequenceShow/hide protein sequence
MSGVWIFDNGVIRLVDRPGKADVGGSGGSRRRKEVLMYIPTDEAMTSHTVLKNKLLSLGWEIYYEDSEIVQFHKHCSVDLISLPTDFNKIKARHLYDVVVKNRNLFQVKD
MHSH