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Sed0017213 (gene) of Chayote v1 genome

Gene IDSed0017213
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:1259730..1260149
RNA-Seq ExpressionSed0017213
SyntenySed0017213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647723.1 hypothetical protein Csa_003961 [Cucumis sativus]4.7e-2768.69Show/hide
Query:  MSIPKLPFSPSNFIQTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWC
        MSIP+LPFSPSN    PK VQ+V KSTSD+LL+KFFDA EFGFDYE SGLWSPPLQR  YL+SSG VLNQTDL  +L+ VLNS     +SCFKF+   C
Subjt:  MSIPKLPFSPSNFIQTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWC

KAG6581370.1 hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3269.16Show/hide
Query:  MSIPKLPFSPSNFIQT--PKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSC-FKFKVF
        MSIP+LPFSPSNFI T     VQ+V K+TSD+LL+KFFDA EFGFDYE SGLWSPPLQR+ YLS+SG V NQ DL R+LE+VL+S R ++  C FKF+VF
Subjt:  MSIPKLPFSPSNFIQT--PKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSC-FKFKVF

Query:  WCSVKQI
        WCSV+QI
Subjt:  WCSVKQI

KAG7026513.1 hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-2575.31Show/hide
Query:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRT-KQRSCFKFK
        TPKLVQ+VPKSTSD+LL+KF DA EFGFDY+TSGLWSPPLQR  YLSSSG V N TDLQR+LENVL+S R+ ++ SCFKF+
Subjt:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRT-KQRSCFKFK

KAG7034657.1 hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]8.0e-2767.35Show/hide
Query:  MSIPKLPFSPSNFIQT--PKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSC-FKFK
        MSIP+LPFSPSNFI T     VQ+V K+TSD+LL+KFFDA EFGFDYE SGLWSPPLQR+ YLS+SG V NQ DL R+LE+VL+S R ++  C FKF+
Subjt:  MSIPKLPFSPSNFIQT--PKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSC-FKFK

XP_038892892.1 uncharacterized protein LOC120081796 [Benincasa hispida]8.0e-3572.9Show/hide
Query:  MSIPKLPFSPSNFI-----QTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFK
        MSIP+LPFSPSNFI      TPK VQ+V KSTSD+LL+KFFDA EFGFDYETSGLWSPPLQR+ YLSSSG V NQTDL  +L+ VLNS R + +SCFKF+
Subjt:  MSIPKLPFSPSNFI-----QTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFK

Query:  VFWCSVK
        VFWCSV+
Subjt:  VFWCSVK

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ8 Uncharacterized protein1.8e-3272.12Show/hide
Query:  MSIPKLPFSPSNFIQTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS
        MSIP+LPFSPSN    PK VQ+V KSTSD+LL+KFFDA EFGFDYE SGLWSPPLQR  YL+SSG VLNQTDL  +L+ VLNS     +SCFKF+VFWC 
Subjt:  MSIPKLPFSPSNFIQTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS

Query:  VKQI
        VKQI
Subjt:  VKQI

A0A314YAR0 Uncharacterized protein6.2e-1750.59Show/hide
Query:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS
        T  +VQ VPKSTSD+LL+KFFDAAEF FDYE SGLWSPP++R  +LSS G +  + ++  +L  ++++  +K ++C   + FWCS
Subjt:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS

A0A314ZRE6 Uncharacterized protein6.2e-1750.59Show/hide
Query:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS
        T  +VQ VPKSTSD+LL+KFFDAAEF FDYE SGLWSPP++R  +LSS G +  + ++  +L  ++++  +K ++C   + FWCS
Subjt:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS

A0A6P5SBA8 uncharacterized protein LOC110756101 isoform X18.1e-1750.59Show/hide
Query:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS
        T  +VQ VPKSTSD+LL+KFFDAAEF FDYE SGLWSPP++R  +LSS G +  + ++  +L  ++++  +K ++C   + FWCS
Subjt:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCS

A0A6P5XB47 uncharacterized protein LOC1112813651.2e-1544.33Show/hide
Query:  PFSPSNFIQ-TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRS-CFKFKVFWCSV
        P SP N  + +P  VQ V KS SD+LL KFFD +E+ FDYE SGLWSPP++R+A+LSS+G +  + ++  + ++V++  R+++R+ CF   ++ C V
Subjt:  PFSPSNFIQ-TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRS-CFKFKVFWCSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein3.5e-0448.98Show/hide
Query:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSS
        T K+V+ +      +LL KF D + FGFDY  S LWSP L RN Y S S
Subjt:  TPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCCCAAACTGCCATTTTCACCTTCTAATTTCATCCAAACTCCAAAATTAGTCCAACAAGTACCCAAATCCACTTCAGACAAATTGCTTCGCAAATTCTTCGA
CGCCGCCGAGTTCGGATTCGATTACGAAACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAATGCTTACTTGAGCTCTTCTGGTCATGTTCTCAACCAAACAGATTTGC
AAAGACAACTTGAGAATGTGTTGAACTCTCATCGTACCAAACAAAGAAGCTGTTTCAAATTCAAAGTGTTTTGGTGCTCGGTGAAGCAAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTCCCAAACTGCCATTTTCACCTTCTAATTTCATCCAAACTCCAAAATTAGTCCAACAAGTACCCAAATCCACTTCAGACAAATTGCTTCGCAAATTCTTCGA
CGCCGCCGAGTTCGGATTCGATTACGAAACAAGTGGCCTCTGGTCTCCCCCTCTTCAACGCAATGCTTACTTGAGCTCTTCTGGTCATGTTCTCAACCAAACAGATTTGC
AAAGACAACTTGAGAATGTGTTGAACTCTCATCGTACCAAACAAAGAAGCTGTTTCAAATTCAAAGTGTTTTGGTGCTCGGTGAAGCAAATCTGA
Protein sequenceShow/hide protein sequence
MSIPKLPFSPSNFIQTPKLVQQVPKSTSDKLLRKFFDAAEFGFDYETSGLWSPPLQRNAYLSSSGHVLNQTDLQRQLENVLNSHRTKQRSCFKFKVFWCSVKQI