; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017216 (gene) of Chayote v1 genome

Gene IDSed0017216
OrganismSechium edule (Chayote v1)
DescriptionTranslation initiation factor IF-3
Genome locationLG03:46170839..46175796
RNA-Seq ExpressionSed0017216
SyntenySed0017216
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]1.8e-11680Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPLSS--KANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPADSK
        MAGL+  FPFK  LS SSA ++  + +A  ++SS+  PFRTS   LP+SS   +N+F+ RLHKSNSLRLVF    +S IR++VFAR  G+PR+SGP DSK
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPLSS--KANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPADSK

Query:  RSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSN+VRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNIDQ
Subjt:  RSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRN+FIVLVPNKAVL KAQEP  KKDKPAV+EVSA
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]2.8e-12586.9Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD
        MAGLTSRFPFKP LS SSATTS+AAAS +SS+++ A PFRTSISPLPL SS++N+F FRLH SNSLRL+ +S IR +VFARF G+PR+SGPADSKRSDDD
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD

Query:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV
         GLDVSAIRSN+VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYSV
Subjt:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA
        RLKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRN+FIVLVPNKAVL KAQEP  KKD PA++EVSA
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA

XP_022937979.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata]2.2e-11480.48Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL--SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDD
        MAGLT+RFPFKP LSHSSA+ + +AA+   S+S+TA P RTSISPLPL  SSK+N+FRFRLH SNSL L+FT+  RSTV A++ G  R SGPADSKR DD
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL--SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDD

Query:  DSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYS
          G+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPV+RIMDY+KYRYE QKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYS
Subjt:  DSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYS

Query:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN
        VRLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVL KAQEP   KD   V+EVSA+
Subjt:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN

XP_023536766.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.3e-11480.76Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD
        MAGLT RFPFKP LSHSSAT + +A++   S+S+TA P RTS+SPLPL SSK+N+FRFRLH SNSL LVFT+  RSTV A++ G  R SGPADSKR DD 
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD

Query:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPV+RIMDY+KYRYE QKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYSV
Subjt:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVL KAQEP   KD   V+EVSA+
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]2.7e-12084.07Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLV----FTSKIRSTVFARFSGSPRASGPADSKR
        MAGL+ RFPFKP LS S+  T+ +AA+ATSS+S+T  PFRTSI PLPL SSKAN+F+FRL KSNSLRLV     +S IR++VF+R+ G+PR+SGPADSKR
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLV----FTSKIRSTVFARFSGSPRASGPADSKR

Query:  SDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQH
        SDD+ GLDVSAIRSN+VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNIDQH
Subjt:  SDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQH

Query:  DYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLTKKDKPAVDEVSA
        DYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRN+FIVLVPNKAVL KAQE P  KKDKPAV+EVSA
Subjt:  DYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLTKKDKPAVDEVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-32.4e-11478.19Show/hide
Query:  MAGLTSRFPFKPPLSHSSA---TTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPAD
        MAGL+  FPFK  LS SSA   TTS+++A+   ++SS+  PFRTS   LP+ SS +N+F+FRLHKSNSLRL+F    +S IR++VFAR  G+PR+SGP D
Subjt:  MAGLTSRFPFKPPLSHSSA---TTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPAD

Query:  SKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNI
        SKRS+D+ GLD+SAI+S +VRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNI
Subjt:  SKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNI

Query:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN
        DQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRN+FIVLVPNKAVL KAQEP  KKDKPAV+ VSA+
Subjt:  DQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN

A0A1S3BV82 Translation initiation factor IF-38.7e-11780Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPLSS--KANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPADSK
        MAGL+  FPFK  LS SSA ++  + +A  ++SS+  PFRTS   LP+SS   +N+F+ RLHKSNSLRLVF    +S IR++VFAR  G+PR+SGP DSK
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPLSS--KANSFRFRLHKSNSLRLVF----TSKIRSTVFARFSGSPRASGPADSK

Query:  RSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQ
        RS+D+ GLDVSAIRSN+VRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNIDQ
Subjt:  RSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQ

Query:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA
        HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRN+FIVLVPNKAVL KAQEP  KKDKPAV+EVSA
Subjt:  HDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA

A0A6J1DYM5 Translation initiation factor IF-31.3e-12586.9Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD
        MAGLTSRFPFKP LS SSATTS+AAAS +SS+++ A PFRTSISPLPL SS++N+F FRLH SNSLRL+ +S IR +VFARF G+PR+SGPADSKRSDDD
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD

Query:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV
         GLDVSAIRSN+VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPV+RIMDYNKYRYELQKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYSV
Subjt:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA
        RLKAAR+FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRN+FIVLVPNKAVL KAQEP  KKD PA++EVSA
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSA

A0A6J1FCR3 Translation initiation factor IF-31.1e-11480.48Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL--SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDD
        MAGLT+RFPFKP LSHSSA+ + +AA+   S+S+TA P RTSISPLPL  SSK+N+FRFRLH SNSL L+FT+  RSTV A++ G  R SGPADSKR DD
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL--SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDD

Query:  DSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYS
          G+D+SAIRSN VRLIDAQQNMVGIVSKAQAIQMA+DAELDLVVLSPDADPPV+RIMDY+KYRYE QKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYS
Subjt:  DSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYS

Query:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN
        VRLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVL KAQEP   KD   V+EVSA+
Subjt:  VRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN

A0A6J1I0C0 Translation initiation factor IF-31.4e-11480.07Show/hide
Query:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD
        MAGLT RFPFKP LSHSSAT + +AA+ +SS ++ A P RTSISPLPL SSK N+FRFR H SNSL LVFT+  RSTV +++ G+ R+SGPADSKR DD 
Subjt:  MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPL-SSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDD

Query:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPV+RIMDY+KYRYE QKKKRGQQKKSAA+RMDLKELKMGYNIDQHDYSV
Subjt:  SGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSV

Query:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN
        RLKAARKFLKDGDKVKVIVNLKGREN F+NIAIELIRRFQEEIGELATEEAKN RDRN+FIVL PNKAVL KAQEP   KD   V+EVSA+
Subjt:  RLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSAN

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-37.0e-3142.05Show/hide
Query:  DSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYN
        D +R+  D       IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK   +  D+KE+KM Y 
Subjt:  DSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYN

Query:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNVFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNVFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic6.0e-7570.89Show/hide
Query:  RFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAAS
        RFSG  R   P   K ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPV+++MDY+KYRYE QK+K+ QQKK+  +
Subjt:  RFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAAS

Query:  RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLT-K
        RMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK ++ K QEP T K
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLT-K

Query:  KDKPAVDEVSANA
        K K A +E SA+A
Subjt:  KDKPAVDEVSANA

Q8R9C2 Translation initiation factor IF-35.4e-3144.1Show/hide
Query:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARK
        IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNVFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELA-TEEAKNFRDRNVFIVLVPNK

Q8YNE3 Translation initiation factor IF-32.7e-3045.4Show/hide
Query:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARK
        IR   +R+ID   + +GI++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK   +  D+KE+KM Y I++HDY+VR+K A +
Subjt:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNVFIVLVPNK
        FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEIGELATEEAKNFRDRNVFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic1.9e-7673.11Show/hide
Query:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA
        +RF G  R       K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPV+R+MDY+KYRYE QK+K+ QQKK+  
Subjt:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA

Query:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT
        +RMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V+ K QE P  
Subjt:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT

Query:  KKDKPAVDEVSA
        KK KPA D+VSA
Subjt:  KKDKPAVDEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein1.7e-0831.68Show/hide
Query:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQK--KKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAA
        I  ++VRL+  + + V  VS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQK--KKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAA

Query:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLV
         K ++ G +VK + V  K +  E      +EL+ RF   IG+ A  E+    DR   +V+V
Subjt:  RKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLV

AT2G24060.1 Translation initiation factor 3 protein4.3e-7670.89Show/hide
Query:  RFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAAS
        RFSG  R   P   K ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPV+++MDY+KYRYE QK+K+ QQKK+  +
Subjt:  RFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAAS

Query:  RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLT-K
        RMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK ++ K QEP T K
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLT-K

Query:  KDKPAVDEVSANA
        K K A +E SA+A
Subjt:  KDKPAVDEVSANA

AT4G30690.1 Translation initiation factor 3 protein1.3e-7773.11Show/hide
Query:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA
        +RF G  R       K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPV+R+MDY+KYRYE QK+K+ QQKK+  
Subjt:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA

Query:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT
        +RMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V+ K QE P  
Subjt:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT

Query:  KKDKPAVDEVSA
        KK KPA D+VSA
Subjt:  KKDKPAVDEVSA

AT4G30690.2 Translation initiation factor 3 protein3.5e-6262.74Show/hide
Query:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA
        +RF G  R       K S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPV+R+MDY+                   
Subjt:  ARFSGSPRASGPADSKRSDDDSGLDVSAIRSNHVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAA

Query:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT
                   YNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V+ K QE P  
Subjt:  SRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQE-PLT

Query:  KKDKPAVDEVSA
        KK KPA D+VSA
Subjt:  KKDKPAVDEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTTCCGTTCAAACCTCCCTTATCACATTCCTCCGCCACCACCTCCGCCGCCGCCGCCTCCGCCACATCCTCCACCTCCTCCACCGCCGT
TCCCTTCCGGACCTCAATTTCCCCTCTCCCTCTCTCCTCCAAAGCCAATTCCTTCAGATTCCGCCTTCACAAATCCAACTCTCTGCGTCTCGTCTTCACCAGTAAAATCC
GTTCAACTGTATTTGCTCGATTCAGCGGTTCTCCTCGAGCTTCAGGACCGGCGGATTCTAAGCGCTCCGACGATGATTCGGGTCTTGACGTTTCCGCCATCAGGTCGAAT
CATGTGAGACTCATCGATGCACAGCAGAACATGGTTGGAATCGTGTCGAAGGCACAGGCCATTCAAATGGCCGAAGACGCTGAACTCGATTTGGTTGTATTATCACCCGA
TGCAGATCCTCCAGTTCTCAGAATAATGGATTACAATAAATATAGATATGAACTTCAAAAGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAAGTCGCATGGATTTGA
AAGAGCTTAAAATGGGTTACAACATTGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAGGAAGTTTTTGAAAGACGGAGACAAGGTTAAAGTTATAGTGAACTTG
AAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAGATTGGGGAGCTTGCAACTGAAGAAGCTAAAAACTTCAGAGACAGGAA
TGTATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACTGAAAGCTCAAGAACCCCTCACCAAAAAAGACAAGCCTGCTGTTGATGAAGTTTCTGCCAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
GCCGAAATCCCACCCTTCACAGTTCACAGTCCTCTTCCACAGCTGAAAGCCATGGCTGGGCTCACCAGCAGATTTCCGTTCAAACCTCCCTTATCACATTCCTCCGCCAC
CACCTCCGCCGCCGCCGCCTCCGCCACATCCTCCACCTCCTCCACCGCCGTTCCCTTCCGGACCTCAATTTCCCCTCTCCCTCTCTCCTCCAAAGCCAATTCCTTCAGAT
TCCGCCTTCACAAATCCAACTCTCTGCGTCTCGTCTTCACCAGTAAAATCCGTTCAACTGTATTTGCTCGATTCAGCGGTTCTCCTCGAGCTTCAGGACCGGCGGATTCT
AAGCGCTCCGACGATGATTCGGGTCTTGACGTTTCCGCCATCAGGTCGAATCATGTGAGACTCATCGATGCACAGCAGAACATGGTTGGAATCGTGTCGAAGGCACAGGC
CATTCAAATGGCCGAAGACGCTGAACTCGATTTGGTTGTATTATCACCCGATGCAGATCCTCCAGTTCTCAGAATAATGGATTACAATAAATATAGATATGAACTTCAAA
AGAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAAGTCGCATGGATTTGAAAGAGCTTAAAATGGGTTACAACATTGACCAACATGATTACTCTGTCCGTTTGAAAGCT
GCAAGGAAGTTTTTGAAAGACGGAGACAAGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGGAACATAGCAATTGAGCTCATCAGACGTTTCCAGGA
AGAGATTGGGGAGCTTGCAACTGAAGAAGCTAAAAACTTCAGAGACAGGAATGTATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACTGAAAGCTCAAGAACCCCTCA
CCAAAAAAGACAAGCCTGCTGTTGATGAAGTTTCTGCCAATGCTTAAGCTCAAGAGTAACATTTATTTATTATATTATTATTTTTTTTGAAAAAAAACCCGGTTCGTGGC
AAGATAACCCCGGTTTGGGATGGTTGTAGCTTTGAAAATAACTTCAGGCAGTTGTGCTTTTATAAGTAAATCAACTGTCTTGTAAGTAGATTAGTGTTTGGTAAATTCTT
GAGCTAGAAACAATATCTTTTTGTTTGTTTTCATTTACGTCATAAAGCTTTAGAAAAAAAGAATTGTTGTACAACATTGTGTTGAGCAAATGTTATTCTAATTTGAG
Protein sequenceShow/hide protein sequence
MAGLTSRFPFKPPLSHSSATTSAAAASATSSTSSTAVPFRTSISPLPLSSKANSFRFRLHKSNSLRLVFTSKIRSTVFARFSGSPRASGPADSKRSDDDSGLDVSAIRSN
HVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVLRIMDYNKYRYELQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNL
KGRENEFRNIAIELIRRFQEEIGELATEEAKNFRDRNVFIVLVPNKAVLLKAQEPLTKKDKPAVDEVSANA