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Sed0017228 (gene) of Chayote v1 genome

Gene IDSed0017228
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG10:6340929..6341783
RNA-Seq ExpressionSed0017228
SyntenySed0017228
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036313.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa]2.6e-3179.27Show/hide
Query:  GIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
        GI+FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DS   LPM +F SSS  NRYSFYKPLGWKCRC N+FFNP
Subjt:  GIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

KAG6604039.1 EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3871.05Show/hide
Query:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP
        MTTMNL  VW  SLL++L+H L L   S  P GI FE++TRLGSTPPSCHNKCNECHPC AVQVPS MP RAGR+DSP  LPM +F SS   NRYSFYKP
Subjt:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP

Query:  LGWKCRCKNNFFNP
        L WKCRC N FFNP
Subjt:  LGWKCRCKNNFFNP

KGN48738.1 hypothetical protein Csa_003101 [Cucumis sativus]1.1e-4276.32Show/hide
Query:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP
        MTTMNL  VW  SLLI+LLH LLL   SS PRG++FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DSP  LPM +F SSS  NRYSFYKP
Subjt:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP

Query:  LGWKCRCKNNFFNP
        LGWKCRC N+FFNP
Subjt:  LGWKCRCKNNFFNP

XP_008440584.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]4.3e-4276.32Show/hide
Query:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP
        MTTMNL  VW  SLLI+LLH LLL   SS PRGI+FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DS   LPM +F SSS  NRYSFYKP
Subjt:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP

Query:  LGWKCRCKNNFFNP
        LGWKCRC N+FFNP
Subjt:  LGWKCRCKNNFFNP

XP_034221250.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Prunus dulcis]3.1e-2453.72Show/hide
Query:  TTMNLP--AVWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSS--SDQN
        TTMN P   ++  +  I+LLHFLLL P S F     R + FEE+TRLGSTPPSCHNKCN+CHPC AVQVP+         D     PM +F  S     N
Subjt:  TTMNLP--AVWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSS--SDQN

Query:  RYSFYKPLGWKCRCKNNFFNP
        +YS YKPLGWKC C ++FFNP
Subjt:  RYSFYKPLGWKCRCKNNFFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGR1 Epidermal patterning factor-like protein5.5e-4376.32Show/hide
Query:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP
        MTTMNL  VW  SLLI+LLH LLL   SS PRG++FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DSP  LPM +F SSS  NRYSFYKP
Subjt:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP

Query:  LGWKCRCKNNFFNP
        LGWKCRC N+FFNP
Subjt:  LGWKCRCKNNFFNP

A0A1S3B112 Epidermal patterning factor-like protein2.1e-4276.32Show/hide
Query:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP
        MTTMNL  VW  SLLI+LLH LLL   SS PRGI+FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DS   LPM +F SSS  NRYSFYKP
Subjt:  MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKP

Query:  LGWKCRCKNNFFNP
        LGWKCRC N+FFNP
Subjt:  LGWKCRCKNNFFNP

A0A314YK12 Epidermal patterning factor-like protein2.0e-2456.2Show/hide
Query:  MNLPA--VWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDS--PPDLPMGYFHSS--SDQN
        MN P   ++  +  I+LLHFLLL P S F     RG+ FEE+TRLGSTPPSCHNKCN+CHPC AVQVP T+P    RV+       PM +F  S  S  N
Subjt:  MNLPA--VWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDS--PPDLPMGYFHSS--SDQN

Query:  RYSFYKPLGWKCRCKNNFFNP
        +YS YKPLGWKC C ++FFNP
Subjt:  RYSFYKPLGWKCRCKNNFFNP

A0A5A7T0A6 Epidermal patterning factor-like protein1.3e-3179.27Show/hide
Query:  GIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
        GI+FE++TRLGSTPPSCHNKCNECHPC AVQVPS MPGRA R+DS   LPM +F SSS  NRYSFYKPLGWKCRC N+FFNP
Subjt:  GIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

A0A5E4G459 Epidermal patterning factor-like protein1.5e-2453.72Show/hide
Query:  TTMNLP--AVWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSS--SDQN
        TTMN P   ++  +  I+LLHFLLL P S F     R + FEE+TRLGSTPPSCHNKCN+CHPC AVQVP+         D     PM +F  S     N
Subjt:  TTMNLP--AVWTNSLLILLLHFLLLFPTSSFP----RGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSS--SDQN

Query:  RYSFYKPLGWKCRCKNNFFNP
        +YS YKPLGWKC C ++FFNP
Subjt:  RYSFYKPLGWKCRCKNNFFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 33.6e-0738.03Show/hide
Query:  EERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRC
        + R R+GS PPSC  KC  C PCEA+Q P+        + S P L             Y+ Y+P GW+C C
Subjt:  EERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRC

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.2e-0432.88Show/hide
Query:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
        LGS+PP C +KC  C PC+ V VP            PP  P+            + Y P  W+C+C N  + P
Subjt:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 17.7e-1842.62Show/hide
Query:  AVWTNSLLILLLHFLLLF--PTSSF---------PRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSD----Q
        A++ ++LL+L L  +LL     SSF         P+    E++ RLGSTPPSCHN+CN CHPC A+QVP T+P R+ R         G+    S      
Subjt:  AVWTNSLLILLLHFLLLF--PTSSF---------PRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSD----Q

Query:  NRYSFYKPLGWKCRCKNNFFNP
        ++YS YKP+GWKC C  +F+NP
Subjt:  NRYSFYKPLGWKCRCKNNFFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 26.1e-0730.53Show/hide
Query:  VWTNS----LLILLL----HFLLLFPTSSFPRGIYFEE----------RTRLGSTPPSCHN-KCNECHPCEAVQVPST------MPGRAGRVDSPPDLPM
        VW+++    LLILL+    HF L+      P  + F +          R  +GS PP C   +C  C  CEA+QVP+        P       S   + +
Subjt:  VWTNS----LLILLL----HFLLLFPTSSFPRGIYFEE----------RTRLGSTPPSCHN-KCNECHPCEAVQVPST------MPGRAGRVDSPPDLPM

Query:  GYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
         Y       N    YKP+ WKC+C N+ +NP
Subjt:  GYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.6e-0532.88Show/hide
Query:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
        LGS+PP C +KC  C PC+ V VP            PP  P+            + Y P  W+C+C N  + P
Subjt:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

AT2G30370.2 allergen-related1.6e-0532.88Show/hide
Query:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
        LGS+PP C +KC  C PC+ V VP            PP  P+            + Y P  W+C+C N  + P
Subjt:  LGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

AT3G13898.1 unknown protein2.6e-0838.03Show/hide
Query:  EERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRC
        + R R+GS PPSC  KC  C PCEA+Q P+        + S P L             Y+ Y+P GW+C C
Subjt:  EERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRC

AT4G37810.1 unknown protein4.4e-0830.53Show/hide
Query:  VWTNS----LLILLL----HFLLLFPTSSFPRGIYFEE----------RTRLGSTPPSCHN-KCNECHPCEAVQVPST------MPGRAGRVDSPPDLPM
        VW+++    LLILL+    HF L+      P  + F +          R  +GS PP C   +C  C  CEA+QVP+        P       S   + +
Subjt:  VWTNS----LLILLL----HFLLLFPTSSFPRGIYFEE----------RTRLGSTPPSCHN-KCNECHPCEAVQVPST------MPGRAGRVDSPPDLPM

Query:  GYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP
         Y       N    YKP+ WKC+C N+ +NP
Subjt:  GYFHSSSDQNRYSFYKPLGWKCRCKNNFFNP

AT5G10310.1 unknown protein5.5e-1942.62Show/hide
Query:  AVWTNSLLILLLHFLLLF--PTSSF---------PRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSD----Q
        A++ ++LL+L L  +LL     SSF         P+    E++ RLGSTPPSCHN+CN CHPC A+QVP T+P R+ R         G+    S      
Subjt:  AVWTNSLLILLLHFLLLF--PTSSF---------PRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSD----Q

Query:  NRYSFYKPLGWKCRCKNNFFNP
        ++YS YKP+GWKC C  +F+NP
Subjt:  NRYSFYKPLGWKCRCKNNFFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCATGAATTTGCCTGCTGTTTGGACCAACTCATTACTTATTCTACTTCTGCATTTTCTTCTTCTATTCCCCACCTCTTCCTTTCCCAGAGGTATATATTTCGA
AGAGAGGACCAGGCTTGGATCCACCCCTCCGAGCTGCCACAACAAGTGCAACGAGTGCCACCCGTGCGAGGCCGTGCAAGTACCTAGTACTATGCCCGGCCGCGCCGGCC
GAGTGGATTCGCCCCCGGATTTGCCAATGGGGTATTTCCACTCGTCTTCCGACCAGAACAGATACTCATTTTACAAGCCATTGGGCTGGAAATGCCGCTGTAAGAACAAC
TTCTTCAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
TCAGAACTTCTCTGCTCTCTTCTCTCACTTGTTCTTGTCGGATAACTTATTAACTCACCCACCCTTTTCCTCTATTAAATGTTCATCTCTCTTTGAAAAATCTGGCAATT
GGGTCTTTATTGGATCCATGAGTTTTTTAGGTATCGATGAGACTTGAATGACTACCATGAATTTGCCTGCTGTTTGGACCAACTCATTACTTATTCTACTTCTGCATTTT
CTTCTTCTATTCCCCACCTCTTCCTTTCCCAGAGGTATATATTTCGAAGAGAGGACCAGGCTTGGATCCACCCCTCCGAGCTGCCACAACAAGTGCAACGAGTGCCACCC
GTGCGAGGCCGTGCAAGTACCTAGTACTATGCCCGGCCGCGCCGGCCGAGTGGATTCGCCCCCGGATTTGCCAATGGGGTATTTCCACTCGTCTTCCGACCAGAACAGAT
ACTCATTTTACAAGCCATTGGGCTGGAAATGCCGCTGTAAGAACAACTTCTTCAATCCTTGATACCAAATTTGCATGTGTCCAAATTTGGAGGGCTGGCCTTCCATTCTT
CTGGTTTTGTAAATGACATTGAATTTGCCAATGGGGTTTTTTTTGCATTTATTGTACATATACTTAAACTCTATACTATCTAGAGAGATCAAACATTTGCTCTACTCTTA
GTTCTAGTTCTTGTTCTACTTGGTTTCATTTTTTTTTTTACTGTTTTATTTTTCTTTTTGAGGAAAACAGATCTAACTACATGATATGAAACTCCTTTGTTTGGTGCC
Protein sequenceShow/hide protein sequence
MTTMNLPAVWTNSLLILLLHFLLLFPTSSFPRGIYFEERTRLGSTPPSCHNKCNECHPCEAVQVPSTMPGRAGRVDSPPDLPMGYFHSSSDQNRYSFYKPLGWKCRCKNN
FFNP