CuGenDBv2

Gene ID	Sed0017262
Organism	Sechium edule (Chayote v1)
Description	C2H2-type domain-containing protein
Genome location	LG13:5406153..5407900
RNA-Seq Expression	Sed0017262
Synteny	Sed0017262
Gene Ontology terms	NA
InterPro domains	IPR007513 - Uncharacterised protein family SERF, N-terminal IPR013087 - Zinc finger C2H2-type IPR026939 - ZNF706/At2g23090 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577120.1 putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]

7.6e-26

92.65

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQ+RNAEKNQK KGSQFEARAVALKVICPICK QLANHNQL DHY SKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

KAG6600413.1 hypothetical protein SDJN03_05646, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-25

94.03

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES
        MTRGKQKIEAQKRNAEKNQK KGSQFEARAVALKVICPICK QLANHNQL DHY SKHPKEKPPSES
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES

KAG7015122.1 hypothetical protein SDJN02_22755 [Cucurbita argyrosperma subsp. argyrosperma]

7.6e-26

92.65

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQ+RNAEKNQK KGSQFEARAVALKVICPICK QLANHNQL DHY SKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

PKI44032.1 hypothetical protein CRG98_035562 [Punica granatum]

2.4e-24

89.71

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQKRNAE+NQK K SQ EARAV LKVICPICK QLANHNQL DHYGSKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

TYK16504.1 zinc finger protein 706-like protein [Cucumis melo var. makuwa]

3.8e-25

92.65

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQKRNAEKNQK KGSQ EARAVALKVICPICK QLAN NQL DHYGSKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

TrEMBL top hits

e value

%identity

Alignment

A0A103XIU1 Zinc finger, C2H2

1.5e-24

91.04

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES
        MTRGKQKIEAQ++NAEKNQKSKGSQFEARAVALKVICPICKAQLAN NQL DHY SKHPKEKPPS S
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES

A0A2I0IJ83 C2H2-type domain-containing protein

1.2e-24

89.71

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQKRNAE+NQK K SQ EARAV LKVICPICK QLANHNQL DHYGSKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

A0A4S8JBD6 C2H2-type domain-containing protein

1.2e-24

88.24

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQ+RNAE+NQK +GSQ EARAV LKVICPICK QLANHNQL DHYGSKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

A0A5D3CZW8 Zinc finger protein 706-like protein

1.8e-25

92.65

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG
        MTRGKQKIEAQKRNAEKNQK KGSQ EARAVALKVICPICK QLAN NQL DHYGSKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

B9S1M3 C2H2-type domain-containing protein

2.6e-24

89.55

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES
        MTRGKQKIEAQ+RNAE+NQK KGSQ EARAVALKVICPICK QLANHNQL DHY SKHPKEKPPSES
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSES

SwissProt top hits

e value

%identity

Alignment

Q5ZMM5 Zinc finger protein 706

2.9e-04

37.14

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Query:  MTRGKQKIEAQKRNAEKNQKSKGSQFE----ARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE
        M RG+QKI++Q++NA+K  + K  Q      A   AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEKNQKSKGSQFE----ARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE

Q9D115 Zinc finger protein 706

3.8e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKSKGSQFEARA-VALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKSKGSQFEARA-VALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE

Q9Y5V0 Zinc finger protein 706

3.8e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKSKGSQFEARA-VALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKSKGSQFEARA-VALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSE

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACTAGAGGGAAACAGAAGATCGAAGCTCAGAAACGAAATGCGGAGAAGAATCAGAAATCAAAGGGCTCCCAATTCGAAGCTAGAGCCGTTGCCCTTAAAGTAATCTG
CCCTATTTGCAAGGCACAACTAGCAAATCATAACCAATTGAGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCACCATCAGAATCTGGCTAA

mRNA sequence

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Protein sequence

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MTRGKQKIEAQKRNAEKNQKSKGSQFEARAVALKVICPICKAQLANHNQLSDHYGSKHPKEKPPSESG

Sed0017262 (gene) of Chayote v1 genome