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Sed0017290 (gene) of Chayote v1 genome

Gene IDSed0017290
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein 830-like isoform X3
Genome locationLG11:4389959..4391353
RNA-Seq ExpressionSed0017290
SyntenySed0017290
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030087.1 hypothetical protein SDJN02_08434, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3146.33Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+SNKR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQVTVP
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +QQN+      L     +VF +    E  L +        KK  K W C +C+V   
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQVTVP

Query:  SEKIFNEHLHGKKHKRNL
        +  +   HL+GKKH+ NL
Subjt:  SEKIFNEHLHGKKHKRNL

XP_022946537.1 zinc finger protein 830-like [Cucurbita moschata]1.6e-2654.48Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+SNKR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

XP_023546779.1 zinc finger protein 830-like [Cucurbita pepo subsp. pepo]3.6e-2650.59Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S   +AA  EP+SNKR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAE
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +QQN+      L     +V +E  K E
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAE

XP_038890954.1 uncharacterized protein LOC120080381 isoform X1 [Benincasa hispida]2.7e-2642.99Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGS
        E P+P + REK+K  T S ST  I+    KK  K+EWSC L ++T   +M +++HL+GK+H+RKEA LRA+   N+SRAA E +  KRRKL K TE   S
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGS

Query:  A--GAKEKESKVGETLQCEKTEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQV
        A  GA+ KESK  ETLQ EK +GSF +NA  V +FLKL  KED KQQN  +   + L+GE   ++  EK+                      + C +C+V
Subjt:  A--GAKEKESKVGETLQCEKTEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQV

Query:  TVPSEKIFNEHLHGKKHKRNL
             K+   H++GKKH+ NL
Subjt:  TVPSEKIFNEHLHGKKHKRNL

XP_038890955.1 uncharacterized protein LOC120080381 isoform X2 [Benincasa hispida]2.7e-2642.99Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGS
        E P+P + REK+K  T S ST  I+    KK  K+EWSC L ++T   +M +++HL+GK+H+RKEA LRA+   N+SRAA E +  KRRKL K TE   S
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGS

Query:  A--GAKEKESKVGETLQCEKTEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQV
        A  GA+ KESK  ETLQ EK +GSF +NA  V +FLKL  KED KQQN  +   + L+GE   ++  EK+                      + C +C+V
Subjt:  A--GAKEKESKVGETLQCEKTEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQV

Query:  TVPSEKIFNEHLHGKKHKRNL
             K+   H++GKKH+ NL
Subjt:  TVPSEKIFNEHLHGKKHKRNL

TrEMBL top hitse value%identityAlignment
A0A6J1G3Z8 zinc finger protein 830-like7.8e-2754.48Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+SNKR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

A0A6J1KBF0 zinc finger protein 830-like isoform X43.9e-2653.79Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+S KR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

A0A6J1KDP5 zinc finger protein 830-like isoform X33.9e-2653.79Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+S KR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

A0A6J1KKC7 zinc finger protein 830-like isoform X13.9e-2653.79Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+S KR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

A0A6J1KKD2 myb-like protein D isoform X53.9e-2653.79Show/hide
Query:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG
        E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+HKR+EA LRA+  S + +AA  EP+S KR KL K    +G
Subjt:  ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYG

Query:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ
        SAGA E KESK GETLQ EKTEGSF  NA + NFL+   KED +Q
Subjt:  SAGAKE-KESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGGAAACACCCAATCCAGAGGTATTTACAGAAAATCAGAAGGTCAAGACGCCATCGGTATTCACCTTTGGTGTGAAGAAAAACCCCAAAGACAAACGGAGTTG
TGCAGATCTAAAGGCTCGAAACATTTCCCAGGCTGCATCCAAGCAATTATCGAGCAAAAAGGGAAAGCTACTCAAAGTCACCGAATTGGCTGGTTCTGTAGGTGCAAAAG
AAAAGGAGTCAGAAGTCGGAGAAACTCTTCAATGTGTGAAAACGGAAGGTAGTTTTATTCAGCATCCAATAGTTCCAAACTTTCTAAAATTTGCTGCCAAAGAGGATAAG
CAACCGAATGAGTTGGGGATTGAGCTGCCACACGAAAACCCTAATCCGTATATAGTTAGAGAAAAGCAGAAGGTTGAGACGCTATCAGCATCCACCTTTGGTATTAAATC
ATTTGGTGGGAAGAAAGATCCCAAGGAAGAGTGGAGTTGTGATCTGTGTCAACTAACCATGTGGACCGAAATGCATTATAGTGAACACCTTTATGGCAAGAGACACAAGC
GGAAAGAAGCAGATCTGAGGGCTCGAATGCTTAGCAATGTTTCCCGGGCTGCAACCGAGCCAGTATCGAACAAAAGGAGAAAGCTACGCAAAGTCACCGAGGCATATGGC
TCTGCAGGTGCAAAAGAAAAGGAGTCAAAAGTTGGAGAAACTCTTCAATGTGAGAAAACAGAAGGTAGTTTTAAACTGAATGCTACAGTTTCAAACTTTTTGAAATTAGC
TGTCAAAGAGGATAAGCAACAGAACGAGTTGGTGATTGAGCCGCTACTGGGAGAATCCAGTCCAAACGTATTTAGAGAAAAGCAGAAGGCCGAGGCGCCATTGGTATCGG
TTGAAATCCAATCATCTGGTGTAAAGAAAAATCCCAAGGAGTGGAGCTGTGTACGATGTCAAGTAACCGTGCCGAGCGAAAAGATTTTTAATGAACACCTTCATGGCAAG
AAGCACAAGCGCAATTTGACAATGCGACTGCAGGAGAAACCCAATCCTAGAGAAAATCTGAAGGTCAAGATGCCATTGGCATCCATCATCAATATTCAACCATTTGATGT
GAAGAAAAAGAACAGGTGGACTTGTGCACTGTGTCAAGTTGCATCTGTGGCGAATAAAAAAGCATTAGATCAACACATTCGTGGATGGAGGCACAGGCGCAAAGAAGCTC
TTCTGGGGGCTCGAAAGGAAAGCAATGTTTTAGAGGCTGCAACCGATCCAGTAACGAACGAAAGGAGAAACCTACTCGAAGTGACCGAGGCATCTGGCTCTGCAGGTACA
GAAAAAAAGGAGCCAAAAGATGTAGAAACTGTTAAATGTGAGAAAACTGAAGTTATTTTTATTGACCTGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCAGGAAACACCCAATCCAGAGGTATTTACAGAAAATCAGAAGGTCAAGACGCCATCGGTATTCACCTTTGGTGTGAAGAAAAACCCCAAAGACAAACGGAGTTG
TGCAGATCTAAAGGCTCGAAACATTTCCCAGGCTGCATCCAAGCAATTATCGAGCAAAAAGGGAAAGCTACTCAAAGTCACCGAATTGGCTGGTTCTGTAGGTGCAAAAG
AAAAGGAGTCAGAAGTCGGAGAAACTCTTCAATGTGTGAAAACGGAAGGTAGTTTTATTCAGCATCCAATAGTTCCAAACTTTCTAAAATTTGCTGCCAAAGAGGATAAG
CAACCGAATGAGTTGGGGATTGAGCTGCCACACGAAAACCCTAATCCGTATATAGTTAGAGAAAAGCAGAAGGTTGAGACGCTATCAGCATCCACCTTTGGTATTAAATC
ATTTGGTGGGAAGAAAGATCCCAAGGAAGAGTGGAGTTGTGATCTGTGTCAACTAACCATGTGGACCGAAATGCATTATAGTGAACACCTTTATGGCAAGAGACACAAGC
GGAAAGAAGCAGATCTGAGGGCTCGAATGCTTAGCAATGTTTCCCGGGCTGCAACCGAGCCAGTATCGAACAAAAGGAGAAAGCTACGCAAAGTCACCGAGGCATATGGC
TCTGCAGGTGCAAAAGAAAAGGAGTCAAAAGTTGGAGAAACTCTTCAATGTGAGAAAACAGAAGGTAGTTTTAAACTGAATGCTACAGTTTCAAACTTTTTGAAATTAGC
TGTCAAAGAGGATAAGCAACAGAACGAGTTGGTGATTGAGCCGCTACTGGGAGAATCCAGTCCAAACGTATTTAGAGAAAAGCAGAAGGCCGAGGCGCCATTGGTATCGG
TTGAAATCCAATCATCTGGTGTAAAGAAAAATCCCAAGGAGTGGAGCTGTGTACGATGTCAAGTAACCGTGCCGAGCGAAAAGATTTTTAATGAACACCTTCATGGCAAG
AAGCACAAGCGCAATTTGACAATGCGACTGCAGGAGAAACCCAATCCTAGAGAAAATCTGAAGGTCAAGATGCCATTGGCATCCATCATCAATATTCAACCATTTGATGT
GAAGAAAAAGAACAGGTGGACTTGTGCACTGTGTCAAGTTGCATCTGTGGCGAATAAAAAAGCATTAGATCAACACATTCGTGGATGGAGGCACAGGCGCAAAGAAGCTC
TTCTGGGGGCTCGAAAGGAAAGCAATGTTTTAGAGGCTGCAACCGATCCAGTAACGAACGAAAGGAGAAACCTACTCGAAGTGACCGAGGCATCTGGCTCTGCAGGTACA
GAAAAAAAGGAGCCAAAAGATGTAGAAACTGTTAAATGTGAGAAAACTGAAGTTATTTTTATTGACCTGACTTAG
Protein sequenceShow/hide protein sequence
MLQETPNPEVFTENQKVKTPSVFTFGVKKNPKDKRSCADLKARNISQAASKQLSSKKGKLLKVTELAGSVGAKEKESEVGETLQCVKTEGSFIQHPIVPNFLKFAAKEDK
QPNELGIELPHENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYG
SAGAKEKESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQNELVIEPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQVTVPSEKIFNEHLHGK
KHKRNLTMRLQEKPNPRENLKVKMPLASIINIQPFDVKKKNRWTCALCQVASVANKKALDQHIRGWRHRRKEALLGARKESNVLEAATDPVTNERRNLLEVTEASGSAGT
EKKEPKDVETVKCEKTEVIFIDLT