; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017292 (gene) of Chayote v1 genome

Gene IDSed0017292
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG01:12455558..12455995
RNA-Seq ExpressionSed0017292
SyntenySed0017292
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]5.0e-4363.57Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLVVHCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

XP_022954427.1 S-protein homolog 74-like [Cucurbita moschata]1.6e-4162.02Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G   GQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]3.2e-4262.79Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

XP_023001658.1 S-protein homolog 74-like [Cucurbita maxima]2.6e-3952.03Show/hide
Query:  MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNV
        M+ +N  C I+L    SNM +KPCFAQ   SK Q   S+W+V++ N M DSTL+VHCKSKD+DLG H +  G  Y+ +F EN+W TT +WC+FSSK+G V
Subjt:  MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNV

Query:  SGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK
        +G VFWPE+G+ L+D C+ + C W   D GI L  G+I S +L YPWK
Subjt:  SGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK

XP_023542206.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]2.1e-4165.49Show/hide
Query:  RLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRL
        + S W+V +VN +KDSTLV HCKSK DDLGEHV+  G KYYW+F EN+W TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ NTC W   D+GIS+R+
Subjt:  RLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRL

Query:  GNIKSLELIYPWK
        G     EL+YPWK
Subjt:  GNIKSLELIYPWK

TrEMBL top hitse value%identityAlignment
A0A1S3C8Z6 S-protein homolog4.3e-3247.26Show/hide
Query:  MKPLNMFCLIIL-FAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVV-TVGTKYYWEFSENLWHTTLYWCNFSSKFGNVS
        M+ L  F L+IL  AF   ++   C   SKYQ  L+ W+V+++N   +++L VHCKSKDDDLG HV+   G +Y W F EN   TT +WCNF S+ G+ S
Subjt:  MKPLNMFCLIIL-FAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVV-TVGTKYYWEFSENLWHTTLYWCNFSSKFGNVS

Query:  GQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW
         +VFWPE GTWL+DRC  + C W   ++G SL  G  K+LE  +PW
Subjt:  GQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW

A0A6J1GQZ0 S-protein homolog7.8e-4262.02Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G   GQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

A0A6J1GSD6 S-protein homolog2.4e-4363.57Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLVVHCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

A0A6J1GSZ3 S-protein homolog1.6e-4262.79Show/hide
Query:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL
        M I  CFAQS      + S W+V +VN +KDSTLV HCKSKDDDLGEHV+  G KY+W+F EN+  TTLYWCNFSSK G  SGQVFWPEK  WL+DRC+ 
Subjt:  MNIKPCFAQSKYQ--TRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDL

Query:  NTCTWFVGDNGISLRLGNIKSLELIYPWK
        NTC W   D+GIS+RLG     EL+YPWK
Subjt:  NTCTWFVGDNGISLRLGNIKSLELIYPWK

A0A6J1KR58 S-protein homolog1.2e-3952.03Show/hide
Query:  MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNV
        M+ +N  C I+L    SNM +KPCFAQ   SK Q   S+W+V++ N M DSTL+VHCKSKD+DLG H +  G  Y+ +F EN+W TT +WC+FSSK+G V
Subjt:  MKPLNMFCLIILFAFVSNMNIKPCFAQ---SKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNV

Query:  SGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK
        +G VFWPE+G+ L+D C+ + C W   D GI L  G+I S +L YPWK
Subjt:  SGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.7e-0940.4Show/hide
Query:  DSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNI-KSLELIYPW
        D  L VHCKS+DDD G H++  G  Y W F  N  ++TLY+C FS +   V   VF   K    + RC    CTW   ++GI    G I K   L Y W
Subjt:  DSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNI-KSLELIYPW

F4JLQ5 S-protein homolog 25.2e-1132.29Show/hide
Query:  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW
        TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS    + S  ++   + +   ++C+ + C W +  NG        K  +L YPW
Subjt:  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW

F4JLS0 S-protein homolog 11.3e-1436.36Show/hide
Query:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL
        ++S+W+V++VN +    TL +HCKSK+DDLGE  +    ++ W F EN+ H+T +WC  +   G+++  VFW +    L  RC    C W    +G+ L
Subjt:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL

O23020 S-protein homolog 51.7e-0928.28Show/hide
Query:  MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQ
        M+ +++ C      F S     P F ++          V++ N +    L +HCKSK DDLG HVV    +Y+++F  NLW +TL++C+F       S  
Subjt:  MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQ

Query:  VFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK
        ++  ++   + D      C W +  +G   RLG        +PWK
Subjt:  VFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK

Q2HQ46 S-protein homolog 747.1e-1635.09Show/hide
Query:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLR
        ++S+W+V++ N +    TL +HCKSK++DLG+  +    ++ W F EN+ H+TL+WC  S   G+++ +VFW +    L  RCD   C W   ++G+ L 
Subjt:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLR

Query:  LGNIKSLELIYPWK
           I    L   WK
Subjt:  LGNIKSLELIYPWK

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.2e-1028.28Show/hide
Query:  MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQ
        M+ +++ C      F S     P F ++          V++ N +    L +HCKSK DDLG HVV    +Y+++F  NLW +TL++C+F       S  
Subjt:  MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQ

Query:  VFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK
        ++  ++   + D      C W +  +G   RLG        +PWK
Subjt:  VFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK

AT4G16195.1 Plant self-incompatibility protein S1 family3.7e-1232.29Show/hide
Query:  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW
        TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS    + S  ++   + +   ++C+ + C W +  NG        K  +L YPW
Subjt:  TLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPW

AT4G16295.1 S-protein homologue 19.5e-1636.36Show/hide
Query:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL
        ++S+W+V++VN +    TL +HCKSK+DDLGE  +    ++ W F EN+ H+T +WC  +   G+++  VFW +    L  RC    C W    +G+ L
Subjt:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISL

AT4G29035.1 Plant self-incompatibility protein S1 family5.0e-1735.09Show/hide
Query:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLR
        ++S+W+V++ N +    TL +HCKSK++DLG+  +    ++ W F EN+ H+TL+WC  S   G+++ +VFW +    L  RCD   C W   ++G+ L 
Subjt:  RLSQWKVSLVNQM-KDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWLTDRCDLNTCTWFVGDNGISLR

Query:  LGNIKSLELIYPWK
           I    L   WK
Subjt:  LGNIKSLELIYPWK

AT5G04350.1 Plant self-incompatibility protein S1 family1.1e-1132.23Show/hide
Query:  FVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLV-VHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWC------NFSSKFGNVSGQVFWPEKG
        F+ ++ I  C   S     + + KV L NQ++ S L+ VHC+SKDDDLGEH++ +G  Y + F +N+W TT + C      NF      V+ +  W    
Subjt:  FVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLV-VHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWC------NFSSKFGNVSGQVFWPEKG

Query:  TWLTDRCDLNTCTWFVGDNGI
             +    +C W   ++GI
Subjt:  TWLTDRCDLNTCTWFVGDNGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCTAAACATGTTTTGTTTGATCATACTGTTTGCTTTTGTATCAAACATGAATATCAAGCCATGTTTTGCACAATCCAAGTATCAAACACGATTGTCGCAATG
GAAAGTGAGCCTTGTGAATCAGATGAAGGATTCAACACTGGTCGTTCACTGCAAATCGAAGGACGACGATTTGGGCGAGCATGTGGTCACGGTCGGAACCAAATACTATT
GGGAGTTCAGTGAAAATCTATGGCACACAACGTTGTATTGGTGCAATTTTAGCAGCAAATTTGGGAATGTTTCTGGACAAGTTTTTTGGCCGGAGAAAGGAACTTGGCTT
ACTGATCGATGTGATTTGAATACATGTACTTGGTTTGTTGGAGACAATGGCATTTCCTTACGTCTTGGAAATATCAAATCTCTTGAGTTAATATACCCTTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTCTAAACATGTTTTGTTTGATCATACTGTTTGCTTTTGTATCAAACATGAATATCAAGCCATGTTTTGCACAATCCAAGTATCAAACACGATTGTCGCAATG
GAAAGTGAGCCTTGTGAATCAGATGAAGGATTCAACACTGGTCGTTCACTGCAAATCGAAGGACGACGATTTGGGCGAGCATGTGGTCACGGTCGGAACCAAATACTATT
GGGAGTTCAGTGAAAATCTATGGCACACAACGTTGTATTGGTGCAATTTTAGCAGCAAATTTGGGAATGTTTCTGGACAAGTTTTTTGGCCGGAGAAAGGAACTTGGCTT
ACTGATCGATGTGATTTGAATACATGTACTTGGTTTGTTGGAGACAATGGCATTTCCTTACGTCTTGGAAATATCAAATCTCTTGAGTTAATATACCCTTGGAAGTGA
Protein sequenceShow/hide protein sequence
MKPLNMFCLIILFAFVSNMNIKPCFAQSKYQTRLSQWKVSLVNQMKDSTLVVHCKSKDDDLGEHVVTVGTKYYWEFSENLWHTTLYWCNFSSKFGNVSGQVFWPEKGTWL
TDRCDLNTCTWFVGDNGISLRLGNIKSLELIYPWK