; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0017322 (gene) of Chayote v1 genome

Gene IDSed0017322
OrganismSechium edule (Chayote v1)
DescriptionDNA repair protein XRCC4
Genome locationLG10:35551968..35555578
RNA-Seq ExpressionSed0017322
SyntenySed0017322
Gene Ontology termsGO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0010165 - response to X-ray (biological process)
GO:0051103 - DNA ligation involved in DNA repair (biological process)
GO:0051351 - positive regulation of ligase activity (biological process)
GO:0005958 - DNA-dependent protein kinase-DNA ligase 4 complex (cellular component)
GO:0032807 - DNA ligase IV complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR009089 - XRCC4, N-terminal domain superfamily
IPR010585 - DNA repair protein XRCC4
IPR014751 - DNA repair protein XRCC4-like, C-terminal
IPR038051 - XRCC4-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571850.1 DNA repair protein XRCC4, partial [Cucurbita argyrosperma subsp. sororia]2.2e-10684.62Show/hide
Query:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN+      SIFVKGTWY+HRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYV+LAERYLGFQQP SVYGFAD GNG+ RLS
Subjt:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTF+KEGMKLEWRWKCR ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQSE+IC+EKV+FETA+YAKFLNVLN KKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
          KQ TTSSKLKQ+D+Y SDKTE+FDD+SD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

XP_008455175.1 PREDICTED: DNA repair protein XRCC4 [Cucumis melo]1.2e-10787.18Show/hide
Query:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN      SSIFVKGTW  HRF+LSITDGL+AWTCHATE+EVRLRAAQWDQEPSDYVALAERYLGFQQPGS+YGFADAGNG  RLS
Subjt:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTFDKEGMKLEWRWKC+PASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQSEKICDEKV+FETAIYAKFLNVLNAKKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        +SKQ TT SKLKQE +YSSDKTE+FDDESD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

XP_022141947.1 DNA repair protein XRCC4-like [Momordica charantia]3.8e-10684.68Show/hide
Query:  MDAIRHTCLKLEV-------QTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRL
        MDAIRHTCLKLEV       ++ S  FVKGTW+RHRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYVALAER+LGFQQPGSVYGFADAGNG+ RL
Subjt:  MDAIRHTCLKLEV-------QTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRL

Query:  SWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRD
        SWTFDKEGMKLEWRW C+PASDNK TTAGILDFLMDANIRLSEEVVRKTQSFERLKVESE CLAQSEKI  EKV+FETAIYAKFLNVLN+KKAKLR +RD
Subjt:  SWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRD

Query:  QISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        Q+SKQ T SSKLKQE++YSSDKTETFDDESD EK+
Subjt:  QISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

XP_022952201.1 DNA repair protein XRCC4 [Cucurbita moschata]2.2e-10684.62Show/hide
Query:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN+      SIFVKGTWY+HRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYV+LAERYLGFQQP SVYGFAD GNG+ RLS
Subjt:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTF+KEGMKLEWRWKCR ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQSE+IC+EKV+FETA+YAKFLNVLN KKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
          KQ TTSSKLKQ+D+Y SDKTE+FDD+SD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

XP_038888651.1 DNA repair protein XRCC4 [Benincasa hispida]4.5e-10786.32Show/hide
Query:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDA RHTCLKLEV TN      SSIFVKGTW  H F+LSITDGLNAW+CHATE+EV LRAAQWDQEPSDYVALAERYLGFQQPGSVYGF DAGNG+ RLS
Subjt:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTFDKEGMKLEWRWKC+PASDNKTTTAGILDFLMDANIRLSEEVVRKTQ FERLK ESE+CLAQSEKICDEKV+FETAIYAKFLNVLNAKKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        +SKQ TT SKLKQE +YSSDKTE+FDDESD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

TrEMBL top hitse value%identityAlignment
A0A1S3BZW1 DNA repair protein XRCC45.8e-10887.18Show/hide
Query:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN      SSIFVKGTW  HRF+LSITDGL+AWTCHATE+EVRLRAAQWDQEPSDYVALAERYLGFQQPGS+YGFADAGNG  RLS
Subjt:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTFDKEGMKLEWRWKC+PASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQSEKICDEKV+FETAIYAKFLNVLNAKKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        +SKQ TT SKLKQE +YSSDKTE+FDDESD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

A0A5A7SK69 DNA repair protein XRCC45.8e-10887.18Show/hide
Query:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN      SSIFVKGTW  HRF+LSITDGL+AWTCHATE+EVRLRAAQWDQEPSDYVALAERYLGFQQPGS+YGFADAGNG  RLS
Subjt:  MDAIRHTCLKLEVQTN------SSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTFDKEGMKLEWRWKC+PASDNKTTTA IL+FLMDANIRLSEEVVRKTQS ERLK ESEKCLAQSEKICDEKV+FETAIYAKFLNVLNAKKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        +SKQ TT SKLKQE +YSSDKTE+FDDESD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

A0A6J1CL88 DNA repair protein XRCC4-like1.9e-10684.68Show/hide
Query:  MDAIRHTCLKLEV-------QTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRL
        MDAIRHTCLKLEV       ++ S  FVKGTW+RHRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYVALAER+LGFQQPGSVYGFADAGNG+ RL
Subjt:  MDAIRHTCLKLEV-------QTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRL

Query:  SWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRD
        SWTFDKEGMKLEWRW C+PASDNK TTAGILDFLMDANIRLSEEVVRKTQSFERLKVESE CLAQSEKI  EKV+FETAIYAKFLNVLN+KKAKLR +RD
Subjt:  SWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRD

Query:  QISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
        Q+SKQ T SSKLKQE++YSSDKTETFDDESD EK+
Subjt:  QISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

A0A6J1GJL0 DNA repair protein XRCC41.1e-10684.62Show/hide
Query:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN+      SIFVKGTWY+HRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYV+LAERYLGFQQP SVYGFAD GNG+ RLS
Subjt:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTF+KEGMKLEWRWKCR ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQSE+IC+EKV+FETA+YAKFLNVLN KKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
          KQ TTSSKLKQ+D+Y SDKTE+FDD+SD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

A0A6J1I7A5 DNA repair protein XRCC4 isoform X19.2e-10684.19Show/hide
Query:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS
        MDAIRHTCLKLEV TN+      SIFVKGTWY+HRF+LSITDGLNAWTCHATE+EVRLRA QWDQEPSDYV LAERYLGFQQP SVY FAD GNG+ RLS
Subjt:  MDAIRHTCLKLEVQTNS------SIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLS

Query:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ
        WTF+KEGMKLEWRWKCR ASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFE+LKVESEKCLAQSE+IC+EKV+FETA+YAKFLNVLN KKAKLRE+RDQ
Subjt:  WTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQ

Query:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS
          KQ TTSSKLKQ+D+Y SDKTE+FDD+SD EK+
Subjt:  ISKQPTTSSKLKQEDDYSSDKTETFDDESDEEKS

SwissProt top hitse value%identityAlignment
Q13426 DNA repair protein XRCC44.4e-0425Show/hide
Query:  FELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVA-LAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLM
        F +++TDG +AWT   +E E+   A     E   YV  L +  L    P  VY F    N      + F ++ +K       R  S N        + + 
Subjt:  FELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVA-LAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKLEWRWKCRPASDNKTTTAGILDFLM

Query:  DANIRLSEEVVRKTQSFERLKVESEKCL-------AQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK-LKQE------DDYSSD
        +      + +       E L+ E+E+ L        + EK    K   ET +Y +F+ VLN KK K+R   +++        K +KQE       + ++D
Subjt:  DANIRLSEEVVRKTQSFERLKVESEKCL-------AQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK-LKQE------DDYSSD

Query:  KTETFDDESDEE
        +   +D+ +DEE
Subjt:  KTETFDDESDEE

Q682V0 DNA repair protein XRCC41.1e-7462.22Show/hide
Query:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL
        +HTCL+LE+     IFVKGTW+  RF++S+TDG ++W C+ATEEEV  RAAQWDQ  S+Y+ LAE+YLGFQQP SVY F+DA  G  RLSWTF+KEG KL
Subjt:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL

Query:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK
        EWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ EK+CDEK +FE+A YAKFL+VLNAKKAKLR  RD+        S 
Subjt:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK

Query:  LKQEDDYSSDKTETFDD-ESDEEKS
           E++ S+DK E+F+   SD+EKS
Subjt:  LKQEDDYSSDKTETFDD-ESDEEKS

Q924T3 DNA repair protein XRCC47.5e-0424.36Show/hide
Query:  LEVQTNSSIFVKGTWYR---HRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKLEWR
        L  + N   F++ +W R     F +++TDG +AWT   +E E+   A     E   Y+    + L    PGS         G  +  ++ + +   LE  
Subjt:  LEVQTNSSIFVKGTWYR---HRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKLEWR

Query:  WK---CRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCL-------AQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISK
         K    R  S N    +   + + +      + +  K    E L+ E+E+ L        + EK    K   E  +Y +F+ VLN KK K+R     +++
Subjt:  WK---CRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCL-------AQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISK

Query:  -QPTTSSKLKQEDDYSSDKTE----TFDDESDEE
         Q    S   + ++  SDKT      +D  +DEE
Subjt:  -QPTTSSKLKQEDDYSSDKTE----TFDDESDEE

Arabidopsis top hitse value%identityAlignment
AT1G61410.1 DNA double-strand break repair and VJ recombination XRCC43.4e-2057.84Show/hide
Query:  MDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSKLKQEDDYSSDKTETFDD-ESDEE
        M+ANIRLSEEVV KT+SFE++K E+E+CLAQ EK+CDEK +FE A YAKFL+VLNAKKAKLR  RD+        S    E++ S+ K E+F+   SD+E
Subjt:  MDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSKLKQEDDYSSDKTETFDD-ESDEE

Query:  KS
        +S
Subjt:  KS

AT3G23100.1 homolog of human DNA ligase iv-binding protein XRCC47.5e-7662.22Show/hide
Query:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL
        +HTCL+LE+     IFVKGTW+  RF++S+TDG ++W C+ATEEEV  RAAQWDQ  S+Y+ LAE+YLGFQQP SVY F+DA  G  RLSWTF+KEG KL
Subjt:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL

Query:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK
        EWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ EK+CDEK +FE+A YAKFL+VLNAKKAKLR  RD+        S 
Subjt:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK

Query:  LKQEDDYSSDKTETFDD-ESDEEKS
           E++ S+DK E+F+   SD+EKS
Subjt:  LKQEDDYSSDKTETFDD-ESDEEKS

AT3G23100.2 homolog of human DNA ligase iv-binding protein XRCC47.5e-7662.22Show/hide
Query:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL
        +HTCL+LE+     IFVKGTW+  RF++S+TDG ++W C+ATEEEV  RAAQWDQ  S+Y+ LAE+YLGFQQP SVY F+DA  G  RLSWTF+KEG KL
Subjt:  RHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKL

Query:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK
        EWRWKC+P+ D+K  T GILDFLM+ANIRLSEEVV KT+SFE+++ E+E+CLAQ EK+CDEK +FE+A YAKFL+VLNAKKAKLR  RD+        S 
Subjt:  EWRWKCRPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSK

Query:  LKQEDDYSSDKTETFDD-ESDEEKS
           E++ S+DK E+F+   SD+EKS
Subjt:  LKQEDDYSSDKTETFDD-ESDEEKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGATCAGGCATACATGCCTGAAGCTTGAAGTTCAAACCAACTCCTCCATCTTCGTCAAAGGCACTTGGTATCGCCACCGCTTCGAGCTCTCCATCACCGACGG
CCTCAACGCTTGGACGTGCCATGCGACGGAGGAGGAGGTTCGGCTGCGCGCTGCACAATGGGACCAAGAACCGTCGGATTATGTGGCCTTGGCCGAGCGCTATTTAGGGT
TTCAGCAGCCTGGTTCCGTCTATGGCTTCGCCGATGCTGGGAATGGAGAAATGAGGCTATCTTGGACATTTGACAAAGAAGGGATGAAGTTAGAATGGCGATGGAAGTGT
CGACCAGCATCTGACAATAAGACGACCACCGCAGGAATATTGGATTTTCTTATGGATGCAAACATAAGGCTGAGCGAAGAAGTTGTGAGAAAAACTCAATCATTTGAGAG
GCTGAAAGTGGAGTCAGAGAAGTGCTTGGCTCAGAGCGAGAAGATTTGCGATGAAAAGGTGGATTTTGAAACTGCTATTTATGCAAAGTTTCTAAATGTCTTGAACGCAA
AGAAGGCAAAACTTAGAGAGTTCAGAGATCAAATTTCAAAACAGCCTACCACTAGCAGCAAACTGAAACAAGAAGATGACTACTCCTCCGATAAAACCGAAACTTTCGAC
GATGAAAGCGATGAAGAAAAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
GCTTTGGCCACAAGCATTTTAGTCTAATTGTTATCTTCCAAAAAGAGATTAAAATAATTTTCGCCTAATTCTCAATTTCAAATTGTGTTCGCCATTAACGCTTACCAAGC
TTCGGCCATAAGCATTTTCAGAGCCATGGACGCGATCAGGCATACATGCCTGAAGCTTGAAGTTCAAACCAACTCCTCCATCTTCGTCAAAGGCACTTGGTATCGCCACC
GCTTCGAGCTCTCCATCACCGACGGCCTCAACGCTTGGACGTGCCATGCGACGGAGGAGGAGGTTCGGCTGCGCGCTGCACAATGGGACCAAGAACCGTCGGATTATGTG
GCCTTGGCCGAGCGCTATTTAGGGTTTCAGCAGCCTGGTTCCGTCTATGGCTTCGCCGATGCTGGGAATGGAGAAATGAGGCTATCTTGGACATTTGACAAAGAAGGGAT
GAAGTTAGAATGGCGATGGAAGTGTCGACCAGCATCTGACAATAAGACGACCACCGCAGGAATATTGGATTTTCTTATGGATGCAAACATAAGGCTGAGCGAAGAAGTTG
TGAGAAAAACTCAATCATTTGAGAGGCTGAAAGTGGAGTCAGAGAAGTGCTTGGCTCAGAGCGAGAAGATTTGCGATGAAAAGGTGGATTTTGAAACTGCTATTTATGCA
AAGTTTCTAAATGTCTTGAACGCAAAGAAGGCAAAACTTAGAGAGTTCAGAGATCAAATTTCAAAACAGCCTACCACTAGCAGCAAACTGAAACAAGAAGATGACTACTC
CTCCGATAAAACCGAAACTTTCGACGATGAAAGCGATGAAGAAAAGAGCTGAGGAAGAAAACTGTTGAGACTTGAAAGCATGTAGTCAGTATGACTTGTGGATCAAGGTA
TGTTACATGAATTAAGTTGGGTTTGTTATCTTTGATGTAGTATGCTGAAGTTTTTTTTAGATAATCGAGAAATCTGGTCCCCAAGGGGTAGTATAGTAAAAGACTTTTTT
TAAAAAAAAAATCGGGAAATCGGAGCTTCATTCCCCTATACTCGGGATACCACTGGCCCATCTCTAGACTGTGACACTGGGATATTTCGAATGATATTTTAGTTTAAGCG
CTTT
Protein sequenceShow/hide protein sequence
MDAIRHTCLKLEVQTNSSIFVKGTWYRHRFELSITDGLNAWTCHATEEEVRLRAAQWDQEPSDYVALAERYLGFQQPGSVYGFADAGNGEMRLSWTFDKEGMKLEWRWKC
RPASDNKTTTAGILDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKICDEKVDFETAIYAKFLNVLNAKKAKLREFRDQISKQPTTSSKLKQEDDYSSDKTETFD
DESDEEKS