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Sed0017348 (gene) of Chayote v1 genome

Gene IDSed0017348
OrganismSechium edule (Chayote v1)
DescriptionPhospho-N-acetylmuramoyl-pentapeptide-transferase
Genome locationLG01:18417042..18443612
RNA-Seq ExpressionSed0017348
SyntenySed0017348
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR009943 - Protein of unknown function DUF1475


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456711.2 PREDICTED: uncharacterized protein LOC103496574 [Cucumis melo]5.2e-3657.05Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AVIGWR LF+LLG TM   L YT++ D SPF   I SR+MV+T+IDIYI IVAI+      EANWI +T+WI+ LVC   ITTCAYILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPNN---------------------ALGCLMAVNLVYVYSDG
        QESFEDIMYHVL++NPN                       L CLMAVNLVY++S G
Subjt:  QESFEDIMYHVLLKNPNN---------------------ALGCLMAVNLVYVYSDG

XP_022134045.1 uncharacterized protein LOC111006414 [Momordica charantia]5.5e-3859.35Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AVIGWR LF LLG TMV TLAYT +ID SPF   + SRLMV+ LID Y  ++AI+      E+NWIAAT+WI+ LVC GSI TCAYILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        QESFEDIMYHVL+KNPN                     ALGCLMAV + Y++SDG
Subjt:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

XP_022134233.1 uncharacterized protein LOC111006539 [Momordica charantia]5.9e-4062.58Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AV GWR LF +LG TMV TLAYTI+ID SPF   + SRLMVSTLID YI +VAI+      E+NWI AT+WI  LVC GSI TC YILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        QESFEDIMYHVL+KNPN                    +ALGCLMAVNLVYV+SDG
Subjt:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

XP_022939439.1 uncharacterized protein LOC111445347 isoform X5 [Cucurbita moschata]9.4e-3861.07Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED
        +A +AVIGWR +FV+L  TM  ++AYTI+ID SPF T  FSRLMV+T+IDI I  VAI+E NWIA+T+WI+ LVCLGSITTCAYIL Q WQLSS ESF+D
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED

Query:  IMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        IMYHVL+ NPN                    + LGCLMAVNLVY++SDG
Subjt:  IMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

XP_022939440.1 uncharacterized protein LOC111445347 isoform X6 [Cucurbita moschata]6.7e-3661.64Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED
        +A +AVIGWR +FV+L  TM  ++AYTI+ID SPF T  FSRLMV+T+IDI I  VAI+E NWIA+T+WI+ LVCLGSITTCAYIL Q WQLSS ESF+D
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED

Query:  IMYHVLL---------KNPN--------NALGCLMAVNLVYVYSDG
        IMYHVL+         K+ N        + LGCLMAVNLVY++SDG
Subjt:  IMYHVLL---------KNPN--------NALGCLMAVNLVYVYSDG

TrEMBL top hitse value%identityAlignment
A0A1S3C3Z3 uncharacterized protein LOC1034965742.5e-3657.05Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AVIGWR LF+LLG TM   L YT++ D SPF   I SR+MV+T+IDIYI IVAI+      EANWI +T+WI+ LVC   ITTCAYILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPNN---------------------ALGCLMAVNLVYVYSDG
        QESFEDIMYHVL++NPN                       L CLMAVNLVY++S G
Subjt:  QESFEDIMYHVLLKNPNN---------------------ALGCLMAVNLVYVYSDG

A0A6J1BWY2 uncharacterized protein LOC1110064142.7e-3859.35Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AVIGWR LF LLG TMV TLAYT +ID SPF   + SRLMV+ LID Y  ++AI+      E+NWIAAT+WI+ LVC GSI TCAYILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        QESFEDIMYHVL+KNPN                     ALGCLMAV + Y++SDG
Subjt:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

A0A6J1C1E1 uncharacterized protein LOC1110065392.9e-4062.58Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        +A++AV GWR LF +LG TMV TLAYTI+ID SPF   + SRLMVSTLID YI +VAI+      E+NWI AT+WI  LVC GSI TC YILWQ WQLSS
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        QESFEDIMYHVL+KNPN                    +ALGCLMAVNLVYV+SDG
Subjt:  QESFEDIMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

A0A6J1FH62 uncharacterized protein LOC111445347 isoform X54.6e-3861.07Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED
        +A +AVIGWR +FV+L  TM  ++AYTI+ID SPF T  FSRLMV+T+IDI I  VAI+E NWIA+T+WI+ LVCLGSITTCAYIL Q WQLSS ESF+D
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED

Query:  IMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG
        IMYHVL+ NPN                    + LGCLMAVNLVY++SDG
Subjt:  IMYHVLLKNPN--------------------NALGCLMAVNLVYVYSDG

A0A6J1FMQ0 uncharacterized protein LOC111445347 isoform X63.3e-3661.64Show/hide
Query:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED
        +A +AVIGWR +FV+L  TM  ++AYTI+ID SPF T  FSRLMV+T+IDI I  VAI+E NWIA+T+WI+ LVCLGSITTCAYIL Q WQLSS ESF+D
Subjt:  IATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAATVWIILLVCLGSITTCAYILWQPWQLSSQESFED

Query:  IMYHVLL---------KNPN--------NALGCLMAVNLVYVYSDG
        IMYHVL+         K+ N        + LGCLMAVNLVY++SDG
Subjt:  IMYHVLL---------KNPN--------NALGCLMAVNLVYVYSDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22750.1 unknown protein3.6e-1132.67Show/hide
Query:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        T+ V G + +  ++   M+ TL YTI  D  P      +F+   V+T++D YI +V I+      E+ W  + +W ILL+  GS+TTC Y+  Q  +L++
Subjt:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY
        QE+ ED MY++LL++                       ALGC+M   LVY
Subjt:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY

AT1G22750.2 unknown protein3.6e-1132.67Show/hide
Query:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        T+ V G + +  ++   M+ TL YTI  D  P      +F+   V+T++D YI +V I+      E+ W  + +W ILL+  GS+TTC Y+  Q  +L++
Subjt:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY
        QE+ ED MY++LL++                       ALGC+M   LVY
Subjt:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY

AT1G22750.3 unknown protein3.6e-1132.67Show/hide
Query:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        T+ V G + +  ++   M+ TL YTI  D  P      +F+   V+T++D YI +V I+      E+ W  + +W ILL+  GS+TTC Y+  Q  +L++
Subjt:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY
        QE+ ED MY++LL++                       ALGC+M   LVY
Subjt:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY

AT1G22750.4 unknown protein3.6e-1132.67Show/hide
Query:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS
        T+ V G + +  ++   M+ TL YTI  D  P      +F+   V+T++D YI +V I+      E+ W  + +W ILL+  GS+TTC Y+  Q  +L++
Subjt:  TAAVIGWRTLFVLLGSTMVVTLAYTISIDASPF--YTHIFSRLMVSTLIDIYIVIVAIS------EANWIAATVWIILLVCLGSITTCAYILWQPWQLSS

Query:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY
        QE+ ED MY++LL++                       ALGC+M   LVY
Subjt:  QESFEDIMYHVLLKNP--------------------NNALGCLMAVNLVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGTTGGGGAATCATGCTCCTTTGTTCGAATCAAAGTCGTACGTCACCTATACTGGTCTTCGATGGAGTTGTTTTCGCTGGCGTTTCATTCCAAAGGGTTTTAGCGCTAC
CACGTTTTTCTGCTTTGTCGCAGAAAGGGAGGTCATGCGTTTGTTCGTTGGTGTGCAGGGCCTTGAGGAGTTGCTAAGAGTCATCCCTCAAGCTGAGTTTTCGCTACGAG
TAAAGTCGGAGTCAACGTGTTTTGGGTGGGCCTCGGGGAGTCGCGGAAAGTCGTCGCTTCAAGCTGAGTCTCCACCACGAGTGAAGTCTGAGTCGCCGAGTTTTAAAGGG
TTCTCCACCATTGTTGTTTCATCGAGGAGAGTCATCGTCGACTGGGTTTTGCCGCCATTTAAGGTCGCTGGAGTGCAGATAATTAAAAGTAAGAATCGGTCCATTTGGTC
AAATACGAGGCTCATTTCAATCGCGACAGCGGCGGTAATTGGATGGAGAACTCTGTTTGTTCTGTTGGGCTCTACAATGGTTGTAACTCTCGCATACACAATCTCCATTG
ACGCATCTCCTTTCTACACTCACATTTTCTCACGGTTAATGGTGTCAACCTTAATTGATATTTATATCGTTATCGTTGCTATTTCGGAAGCAAACTGGATTGCTGCAACA
GTTTGGATAATTCTTCTTGTATGTTTAGGCAGCATTACTACTTGCGCCTACATTCTTTGGCAACCGTGGCAACTATCTTCTCAAGAATCCTTTGAAGATATTATGTATCA
TGTTTTGCTCAAGAATCCGAACAATGCTTTGGGTTGTTTGATGGCGGTAAATTTGGTCTATGTTTACAGTGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
CAGTTGGGGAATCATGCTCCTTTGTTCGAATCAAAGTCGTACGTCACCTATACTGGTCTTCGATGGAGTTGTTTTCGCTGGCGTTTCATTCCAAAGGGTTTTAGCGCTAC
CACGTTTTTCTGCTTTGTCGCAGAAAGGGAGGTCATGCGTTTGTTCGTTGGTGTGCAGGGCCTTGAGGAGTTGCTAAGAGTCATCCCTCAAGCTGAGTTTTCGCTACGAG
TAAAGTCGGAGTCAACGTGTTTTGGGTGGGCCTCGGGGAGTCGCGGAAAGTCGTCGCTTCAAGCTGAGTCTCCACCACGAGTGAAGTCTGAGTCGCCGAGTTTTAAAGGG
TTCTCCACCATTGTTGTTTCATCGAGGAGAGTCATCGTCGACTGGGTTTTGCCGCCATTTAAGGTCGCTGGAGTGCAGATAATTAAAAGTAAGAATCGGTCCATTTGGTC
AAATACGAGGCTCATTTCAATCGCGACAGCGGCGGTAATTGGATGGAGAACTCTGTTTGTTCTGTTGGGCTCTACAATGGTTGTAACTCTCGCATACACAATCTCCATTG
ACGCATCTCCTTTCTACACTCACATTTTCTCACGGTTAATGGTGTCAACCTTAATTGATATTTATATCGTTATCGTTGCTATTTCGGAAGCAAACTGGATTGCTGCAACA
GTTTGGATAATTCTTCTTGTATGTTTAGGCAGCATTACTACTTGCGCCTACATTCTTTGGCAACCGTGGCAACTATCTTCTCAAGAATCCTTTGAAGATATTATGTATCA
TGTTTTGCTCAAGAATCCGAACAATGCTTTGGGTTGTTTGATGGCGGTAAATTTGGTCTATGTTTACAGTGATGGTTAA
Protein sequenceShow/hide protein sequence
QLGNHAPLFESKSYVTYTGLRWSCFRWRFIPKGFSATTFFCFVAEREVMRLFVGVQGLEELLRVIPQAEFSLRVKSESTCFGWASGSRGKSSLQAESPPRVKSESPSFKG
FSTIVVSSRRVIVDWVLPPFKVAGVQIIKSKNRSIWSNTRLISIATAAVIGWRTLFVLLGSTMVVTLAYTISIDASPFYTHIFSRLMVSTLIDIYIVIVAISEANWIAAT
VWIILLVCLGSITTCAYILWQPWQLSSQESFEDIMYHVLLKNPNNALGCLMAVNLVYVYSDG