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Sed0017365 (gene) of Chayote v1 genome

Gene IDSed0017365
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:6495383..6495910
RNA-Seq ExpressionSed0017365
SyntenySed0017365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579170.1 hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sororia]9.7e-0657.63Show/hide
Query:  APAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSST--SPPP-----------SSRVFARN
        A A   PRLIPKRG VLRRVL KLFFFC+CS++   +PPP           SSRVF RN
Subjt:  APAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSST--SPPP-----------SSRVFARN

KAG6594821.1 hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sororia]8.2e-0570.73Show/hide
Query:  AAPAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPPSS
        AA   AAPR IPKRGQVLRR+L KLFF C CSS   PPPS+
Subjt:  AAPAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPPSS

KGN49746.1 hypothetical protein Csa_017810 [Cucumis sativus]5.1e-0770.21Show/hide
Query:  PAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPP---SSRVFAR
        P A APR IPKRG+VLRRVL  LFFFCLCS    PPP   SSRVF R
Subjt:  PAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPP---SSRVFAR

TrEMBL top hitse value%identityAlignment
A0A0A0KPU0 Uncharacterized protein2.5e-0770.21Show/hide
Query:  PAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPP---SSRVFAR
        P A APR IPKRG+VLRRVL  LFFFCLCS    PPP   SSRVF R
Subjt:  PAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPP---SSRVFAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCCGCCCCCGCCGCCGCAGCTCCTCGTTTGATCCCCAAACGAGGCCAAGTTCTCCGCCGTGTTCTCAGTAAGCTCTTCTTCTTCTGCCTCTGCTCCTCCTCCAC
ATCTCCGCCGCCCTCCTCTCGCGTTTTTGCTCGAAATAATTCTTCCGGCGATGAAGCGGATTTATGA
mRNA sequenceShow/hide mRNA sequence
TCTCAACTCACAAACAAAACACTCAAAACCGTTAAATACACAATACCCCCGCCCTCTAAATGACCGCCGCCCCCGCCGCCGCAGCTCCTCGTTTGATCCCCAAACGAGGC
CAAGTTCTCCGCCGTGTTCTCAGTAAGCTCTTCTTCTTCTGCCTCTGCTCCTCCTCCACATCTCCGCCGCCCTCCTCTCGCGTTTTTGCTCGAAATAATTCTTCCGGCGA
TGAAGCGGATTTATGAGAAATGAGATGAGGATTTTGGCATTTCTCTTTATTTATTCTTAATTTATCAGCGTCTTACTTCTTTCTCTAAGTCTAAAGCCTGTTTGATAATT
ATTTTATTTTTTTCTATTAAAAAATAAAATGATTATCTAATGGGATTTAGTTTTCAAAATCATTTTGATTTTTTTTTTTATCAGAATGAGAATCTATCGGGTGGAGTCCG
CACCATCTATTCTTTAGATGGTTATAAGGGGGGAGGTGGTGCAAATTCATATTGTTTACTTCTTTTATGTTGTAATGTTAATAAATTC
Protein sequenceShow/hide protein sequence
MTAAPAAAAPRLIPKRGQVLRRVLSKLFFFCLCSSSTSPPPSSRVFARNNSSGDEADL