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Sed0017378 (gene) of Chayote v1 genome

Gene IDSed0017378
OrganismSechium edule (Chayote v1)
DescriptionPH, RCC1 and FYVE domains-containing protein 1-like
Genome locationLG05:12954722..12961299
RNA-Seq ExpressionSed0017378
SyntenySed0017378
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061774.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Cucumis melo var. makuwa]2.3e-1370Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGSS+AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

KAG7010291.1 Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1268.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA+II+SNS++LSNGS++ASNR SGH RQ NSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

TYJ96116.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Cucumis melo var. makuwa]6.6e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

XP_008449668.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 [Cucumis melo]6.6e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

XP_038900986.1 PH, RCC1 and FYVE domains-containing protein 1 [Benincasa hispida]3.9e-1370Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA+II+SNSH+LSNGS++AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

TrEMBL top hitse value%identityAlignment
A0A1S3BNH2 LOW QUALITY PROTEIN: uncharacterized protein LOC1034914793.2e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

A0A5A7V3C5 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 11.1e-1370Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGSS+AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

A0A5D3BB50 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 13.2e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA++I+SNSH+LSNGS +AS R SGH RQGNSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

A0A6J1DFK1 uncharacterized protein LOC1110206195.4e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        M  EA II+SNSH+LSNGSS+ASNR SGH RQGNSDS  RN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

A0A6J1J5L8 PH, RCC1 and FYVE domains-containing protein 1-like5.4e-1368.57Show/hide
Query:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS
        MS EA+II+SNS++LSNGS++ASNR SGH RQ NSDSTTRN NK+KE DS +DAEW +QDE GVY  + S
Subjt:  MSQEANIIDSNSHILSNGSSSASNRCSGH-RQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAGAAGCCAACATTATAGATTCCAACAGTCACATACTGTCTAATGGGTCTAGCTCTGCTAGTAACCGTTGTTCAGGTCACAGACAAGGAAATTCTGATTCAAC
AACTAGAAATGTCAACAAGATTAAAGAAAGAGATTCTCATAATGATGCCGAATGGGATGATCAAGATGAGCTTGGTGTATATCACCTTTACTTCTCTTCAGGGTGGTGCC
AAAGATCTCAAGCGATCGGAAACGATTTATCGAGAAACAAGCAGAACAGTGGTGGGCAGAGAATCGAGCAAGAGTATGAAGAGAAGCGTCAGGGGCCTACTCAGTCAAAT
CAGCCCCGTCTTGGTAATTTTGTGGATTCTTTTGAATGGCAAACTCAACTCAGCAGAGGTTCTTCAAAGGAAGCTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAGAAGCCAACATTATAGATTCCAACAGTCACATACTGTCTAATGGGTCTAGCTCTGCTAGTAACCGTTGTTCAGGTCACAGACAAGGAAATTCTGATTCAAC
AACTAGAAATGTCAACAAGATTAAAGAAAGAGATTCTCATAATGATGCCGAATGGGATGATCAAGATGAGCTTGGTGTATATCACCTTTACTTCTCTTCAGGGTGGTGCC
AAAGATCTCAAGCGATCGGAAACGATTTATCGAGAAACAAGCAGAACAGTGGTGGGCAGAGAATCGAGCAAGAGTATGAAGAGAAGCGTCAGGGGCCTACTCAGTCAAAT
CAGCCCCGTCTTGGTAATTTTGTGGATTCTTTTGAATGGCAAACTCAACTCAGCAGAGGTTCTTCAAAGGAAGCTATCTAA
Protein sequenceShow/hide protein sequence
MSQEANIIDSNSHILSNGSSSASNRCSGHRQGNSDSTTRNVNKIKERDSHNDAEWDDQDELGVYHLYFSSGWCQRSQAIGNDLSRNKQNSGGQRIEQEYEEKRQGPTQSN
QPRLGNFVDSFEWQTQLSRGSSKEAI