CuGenDBv2

Gene ID	Sed0017383
Organism	Sechium edule (Chayote v1)
Description	Reticulon family protein
Genome location	LG08:32324783..32335207
RNA-Seq Expression	Sed0017383
Synteny	Sed0017383
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003388 - Reticulon IPR044177 - Reticulon-like protein B22/B23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

4.6e-80

92.44

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Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R + CKTEVGKP VAL CGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA+I+PFLRRGN+ TS QDAI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

3.9e-79

91.28

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R + CKTEVGKP VALICGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA+I+P LRRGN+ TS QD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

XP_022150304.1 reticulon-like protein B22 [Momordica charantia]

6.9e-76

86.63

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR +   T++GKP+VALICGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLC+LC+YMVLENSES S S+ PF RRGND TS QDAI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]

3.9e-79

91.86

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR + CKTEVGKPLVALICGSLVYYHCA+RNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA I+PFLRRGND  S QD+I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

3.2e-81

92.44

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Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR + CKTEVGKP VALICGSL+YYHCA+RNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISASI+PF+RRGND TS QDAI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

1.9e-79

91.28

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R + CKTEVGKP VALICGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA+I+P LRRGN+ TS QD I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

A0A1S3CPH6 reticulon-like protein B22 isoform X2

2.2e-80

92.44

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MA+R + CKTEVGKP VAL CGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA+I+PFLRRGN+ TS QDAI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

A0A6J1D9M0 reticulon-like protein B22

3.4e-76

86.63

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR +   T++GKP+VALICGSLVYYHCAFRNSS LSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLC+LC+YMVLENSES S S+ PF RRGND TS QDAI
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

A0A6J1GJ96 reticulon-like protein B22 isoform X1

1.9e-79

91.86

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR + CKTEVGKPLVALICGSLVYYHCA+RNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA I+PFLRRGND  S QD+I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

A0A6J1I734 reticulon-like protein B22 isoform X1

1.9e-79

91.86

Show/hide

Query:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
        MANR + CKTEVGKPLVALICGSLVYYHCA+RNSS LSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA
Subjt:  MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVA

Query:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI
        ATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLC+LCIYMVLENSESISA I+PFLRRGND  S QD+I
Subjt:  ATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

8.9e-50

71.74

Show/hide

Query:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVY+HCA RN++ LSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENS

Q8GWH5 Reticulon-like protein B22

7.0e-55

68.32

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Query:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVYYHCA+RN++ LSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDA
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN    +Q+A
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDA

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

6.3e-51

71.74

Show/hide

Query:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVY+HCA RN++ LSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENS

AT1G78895.1 Reticulon family protein

5.0e-56

68.32

Show/hide

Query:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVYYHCA+RN++ LSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDA
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN    +Q+A
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGAATCGGAGGATGAAGTGCAAGACCGAAGTGGGCAAACCCCTTGTGGCTCTGATTTGCGGTTCTCTGGTCTATTACCATTGCGCCTTTCGAAATTCCAGTTTCCT
CTCCCTCGTCGCCGACGTCTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCACATGAACGTCTCGGTACCGGTGGACCCACTTGAGTGGCAAA
TTTCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCTGCTGAGTCTGTTCTGAGAGTGGCAGCAACAGGGCATGACAAAAGGCTTTTTGTT
AAGGTGGTTGTTTGTCTTTATGCTCTCTCAGTCCTTGGAAGATTGGTTTCGGGTGTTACAGTTGCCTACACTGGTTTATGCATTTTATGTATATACATGGTGTTGGAGAA
TTCTGAGTCAATCAGTGCTTCTATTGCGCCTTTTCTTAGGAGAGGAAACGACTCGACTTCACAACAAGATGCCATCTAA

mRNA sequence

Show/hide mRNA sequence

AATAAATTGGGAAGGGAGAGAAGGAAAAAAAAGGTTGGGGCCGTGGGCCTTAGGAGTGAAAAGAAAAGGGAATTGGCGAAATTGAGAGTGGGGATTGGATTGTGGAGGAG
CGAAATTGAGGGAATTGAAAGACGCAGAAATGGCGAATCGGAGGATGAAGTGCAAGACCGAAGTGGGCAAACCCCTTGTGGCTCTGATTTGCGGTTCTCTGGTCTATTAC
CATTGCGCCTTTCGAAATTCCAGTTTCCTCTCCCTCGTCGCCGACGTCTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCACATGAACGTCTC
GGTACCGGTGGACCCACTTGAGTGGCAAATTTCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCTGCTGAGTCTGTTCTGAGAGTGGCAG
CAACAGGGCATGACAAAAGGCTTTTTGTTAAGGTGGTTGTTTGTCTTTATGCTCTCTCAGTCCTTGGAAGATTGGTTTCGGGTGTTACAGTTGCCTACACTGGTTTATGC
ATTTTATGTATATACATGGTGTTGGAGAATTCTGAGTCAATCAGTGCTTCTATTGCGCCTTTTCTTAGGAGAGGAAACGACTCGACTTCACAACAAGATGCCATCTAATC
TTCACTGCCTGTAAACTCTGTTGTGTCACTGTAGATAGAGATACACACCTGTGAATATTACCATTTACAGAATCAGTAAATCATTTTGATTGTTTTGGAGGAGGTCATAA
ATTTATTTGACAGAAAAAAGAAGAATCTTAGGAGCCATTGTTGATTACTGATCAATCATTGAGTATCTGTTCTTTTATGTGAAGTTGAGTGGTGTGAAAAAGAAAATGCT
GTTACTTGGGTTATACAATAGTTTTACCAACTTTAATTGCAAGGATATGGAAACTTGTTCAGTATACTTCATTATTACTATACATTGCTATGCATCCATGTTCAAATTTT
ATCATGCAGATGAAACTGATCATAGATTGTTCCTATCAAGGACAGAAGCATGGCAGAATTTCTTACAACCCTCTTGAGATTCTGAGAAC

Protein sequence

Show/hide protein sequence

MANRRMKCKTEVGKPLVALICGSLVYYHCAFRNSSFLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
KVVVCLYALSVLGRLVSGVTVAYTGLCILCIYMVLENSESISASIAPFLRRGNDSTSQQDAI

Sed0017383 (gene) of Chayote v1 genome