CuGenDBv2

Gene ID	Sed0017404
Organism	Sechium edule (Chayote v1)
Description	protein FAM32A
Genome location	LG06:46277208..46277977
RNA-Seq Expression	Sed0017404
Synteny	Sed0017404
Gene Ontology terms	GO:0016126 - sterol biosynthetic process (biological process) GO:0005730 - nucleolus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (molecular function)
InterPro domains	IPR013865 - Protein FAM32A

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0068187.1 protein FAM32A [Cucumis melo var. makuwa]

2.8e-13

82.35

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PA L
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL

XP_004144416.1 protein FAM32A [Cucumis sativus]

1.2e-13

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PAG
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

XP_008465099.1 PREDICTED: protein FAM32A [Cucumis melo]

1.2e-13

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PAG
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

XP_022152607.1 protein FAM32A [Momordica charantia]

1.1e-14

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKK HDQIS+D++NE+P G
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

XP_038896127.1 protein FAM32A [Benincasa hispida]

1.2e-13

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PAG
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCJ6 Uncharacterized protein

2.1e-14

84.31

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PAGL
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL

A0A1S3CN03 protein FAM32A

6.0e-14

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PAG
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

A0A5D3DCV4 Protein FAM32A

1.3e-13

82.35

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQISR+++NE+PA L
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGL

A0A6J1DGQ7 protein FAM32A

5.5e-15

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKK HDQIS+D++NE+P G
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

A0A6J1IS50 protein FAM32A-like

2.3e-13

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MS+YDNVVGGKLKLKGKALDVKVGGVKKKKK+KK  DQ SR+++NE+PAG
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16810.1 unknown protein

5.6e-12

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MSAYDNV+GGKLKLKGKALDVK GGVKKKKK K+Q +Q  +  D+E   G
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

AT1G16810.2 unknown protein

5.6e-12

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Query:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG
        MSAYDNV+GGKLKLKGKALDVK GGVKKKKK K+Q +Q  +  D+E   G
Subjt:  MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAG

Sequences

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CDS sequence

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mRNA sequence

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ATGTCTGCATATGACAATGTTGTGGGTGGGAAGTTGAAACTTAAAGGGAAAGCTCTTGATGTTAAAGTTGGTGGGGTGAAGAAGAAAAAGAAAGTAAAAAAGCAGCACGA
TCAAATTTCTCGAGATATAGATAACGAGTATCCAGCAGGTTTGTTTTCAATTATTACTGGAAATGTTTGGCTGGATATTAGTGAATGTATATTAATGAACGATCTGCGTT
ATTCATAGGGAAATTAGAACTACTAGAGAGCACAACTGCACAGCTAAGACGTTACGTTATTGAATTATGAATTTTTAGTCTTTTGTTGGTCCAGAGAGTTGTTAGGCAAT
AAACATAGATTGATTGTTTTCCTGTAATCCTTGATTTGTATGGGAGGACTGCAATTTAAACCAGTAGATTTATTGAATTACTTTCTTGCCCAAAATCATTGCTTGCTGAA
ATGGGAATAGAGGAAGCGCTTTACCTTTTCTTGTAGTAAGTAGCATACTTGATTACAGTAGGTTATACCAATTAGAAAATAAAGTAGTAGGATAGTTACAAAAAGGAGGG
AGACGATGGCTCCAAAATAATCCAGTATGAGTCGAAGATTCAAGTTTCCAAATAGTGATGATTGTCATTGAATATCCTGTTGTTTCTTTCCATCCACCATTTTCCAAAAA
AAAAACATACAGAAAATTAGTCCATAAGAACCACCTTTGTGCCCTTGAATGGATGACCAATAAAAACACAATAAATAAGACTTGATGTGTCCTTAGGCCGTAAAAACGAC

Protein sequence

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MSAYDNVVGGKLKLKGKALDVKVGGVKKKKKVKKQHDQISRDIDNEYPAGLFSIITGNVWLDISECILMNDLRYS

Sed0017404 (gene) of Chayote v1 genome