CuGenDBv2

Gene ID	Sed0017418
Organism	Sechium edule (Chayote v1)
Description	DNA-directed RNA polymerase subunit beta
Genome location	LG10:6505462..6507521
RNA-Seq Expression	Sed0017418
Synteny	Sed0017418
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604023.1 hypothetical protein SDJN03_04632, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-86

56.48

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS
        M E  IDDV  HN  AL   TNRPLKRKLSSI S SG K+RD CGK V+GKD +S+ PKH      EY        C + C  + L RF  + LES C+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNV--------------------VDEEVLSRL
        AS              VQ +L NDEAH  Q+D+ RI D EAL   C P S +PTCPEDD +DCP  +  N                      D    SRL
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNV--------------------VDEEVLSRL

Query:  PTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLEFDVCG
        P  EG+KS  LE  S   TD+CANL +Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYHD G SS SKLEFD+CG
Subjt:  PTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLEFDVCG

Query:  QWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        QWMSLFRHMEDMFA EGSQ       L +LRE+ KMNLEMLNGMPME
Subjt:  QWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

XP_022132361.1 uncharacterized protein LOC111005240 [Momordica charantia]

2.7e-88

55.4

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCN----QLCNKVALPRFGKGLESDCASA
        M E  I+DVL HN   L   TNRPLKRK+SSI + SG KSRD C K+++GKD +S+FPKH          E CN    ++C+ +ALPRF K  ESDC+ A
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCN----QLCNKVALPRFGKGLESDCASA

Query:  S-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL------------------------
        S              VQ  LLNDE   +Q+DKQR+ D EAL       S VPTCPED  KDC  I+Q N  +EE +                        
Subjt:  S-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL------------------------

Query:  --SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLE
          SRLP  EGSK   L+  S + TD+CAN D+YGDLLKTCSC  CLKASYIW  LHYQDIKGRIS L KSQKD SILAQK SKEKET HD G SS SKLE
Subjt:  --SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLE

Query:  FDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        FD+CGQW+SLFRHMEDMFA EGSQ       L +LREE KMNLEMLNGMPME
Subjt:  FDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

XP_022949925.1 uncharacterized protein LOC111453172 [Cucurbita moschata]

9.6e-86

55.24

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS
        M E  IDDV  HN  AL   TNRPLKRKLSSI S SG K+RD CGK V+GKD +S+ PKH      EY        C + C  + L RF  + LES C+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------
        AS              VQ +L NDEAH  Q+D+ RI D EAL   C P S +PTCPEDD +DCP  +  N   E  +                       
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------

Query:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL
           SRLP  EGSKS  LE  S   TD+CANL +Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEK+TYHD G SS SKL
Subjt:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL

Query:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        EFD+CGQWMSLFRHMEDMFA EGSQ       L +LRE+ KMNLEMLNGMP+E
Subjt:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

XP_023544544.1 uncharacterized protein LOC111804093 [Cucurbita pepo subsp. pepo]

6.7e-87

56.09

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS
        M E  IDDV  HN  AL   TNRPLKRKLSSI S SG K+RD CGK V+GKD +S+ PKH      EY        C + CN + L RF  + LES C+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------
        AS              VQ +L NDEAH  Q+D+ RI D E L   C P S VPTCPEDD +DCP  +  N  +E  +                       
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------

Query:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL
           SRLP  EGSKS  LE  S   TD+CANL +Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYHD G SS SKL
Subjt:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL

Query:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        EFD+CGQWMSLFRHMEDMFA EGSQ       L +LRE+ KMNLEMLNGMPME
Subjt:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

XP_038881150.1 uncharacterized protein LOC120072744 [Benincasa hispida]

2.8e-85

55.52

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCNQLCNK----VALPRFGK-GLESDCAS
        M E  ++D L HN   L   TNRPLKRKLSSI S SG KSRD CGK+V+GK+ D +FPKH          E C + C K    +AL RF K   ESDC+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCNQLCNK----VALPRFGK-GLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------
        AS              VQ +L NDE H +Q+D+ RI D EAL   C P S VPTC EDD KDCP I+  N  +EE                         
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------

Query:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL
           SR+P   GSKS  LE  S + TD+CANLD+YGDLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYH  G SS SKL
Subjt:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL

Query:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        EFD+CGQWMSLFRHMED FA EG+Q       L +LREE KMNLEMLN MPME
Subjt:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B1K2 uncharacterized protein LOC103484984

1.3e-83

54.24

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--------EYCNQLCNK--------VALPRFGK-GLESDC
        M E  ID VL HN PALA  TNRPLKRKLSSI S SGAK RD CGK+V+G+D D++FPKH        EY  + C +        +AL RF K   ESDC
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--------EYCNQLCNK--------VALPRFGK-GLESDC

Query:  ASAS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEV----------------------
        + AS              VQ +L  DE H + + + RI D EAL   C P S +PTC ED  K+CP I+  N  +EEV                      
Subjt:  ASAS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEV----------------------

Query:  ---LSRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK
            SR+P  EGSKS  L+  S + T++CAN D+Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYH  G SS SK
Subjt:  ---LSRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK

Query:  LEFDVCGQWMSLFRHMEDMFAPEGSQLVN-------LREERKMNLEMLNGMPME
        LE D+CGQWMSLFRHMED FA EG+QL N       LREE KMNLEMLN MPME
Subjt:  LEFDVCGQWMSLFRHMEDMFAPEGSQLVN-------LREERKMNLEMLNGMPME

A0A5A7T0D0 Putative Tether containing UBX domain for GLUT4

1.2e-81

52.19

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--------EYCNQLCNK--------VALPRFGK-GLESDC
        M E  ID VL HN PALA  TNRPLKRKLSSI S SGAK RD CGK+V+G+D D++FPKH        EY  + C +        +AL RF K   ESDC
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--------EYCNQLCNK--------VALPRFGK-GLESDC

Query:  ASAS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEV----------------------
        + AS              VQ +L  DE H + + + RI D EAL   C P S +PTC ED  K+CP I+  N  +EEV                      
Subjt:  ASAS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEV----------------------

Query:  ---LSRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK
            SR+P  EGSKS  L+  S + T++CAN D+Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYH  G SS SK
Subjt:  ---LSRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK

Query:  LEFDVCGQWMSLFRHMEDMFAPEGSQ-------------------LVNLREERKMNLEMLNGMPME
        LE D+CGQWMSLFRHMED FA EG+Q                   L +LREE KMNLEMLN MPME
Subjt:  LEFDVCGQWMSLFRHMEDMFAPEGSQ-------------------LVNLREERKMNLEMLNGMPME

A0A6J1BTM4 uncharacterized protein LOC111005240

1.3e-88

55.4

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCN----QLCNKVALPRFGKGLESDCASA
        M E  I+DVL HN   L   TNRPLKRK+SSI + SG KSRD C K+++GKD +S+FPKH          E CN    ++C+ +ALPRF K  ESDC+ A
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH----------EYCN----QLCNKVALPRFGKGLESDCASA

Query:  S-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL------------------------
        S              VQ  LLNDE   +Q+DKQR+ D EAL       S VPTCPED  KDC  I+Q N  +EE +                        
Subjt:  S-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL------------------------

Query:  --SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLE
          SRLP  EGSK   L+  S + TD+CAN D+YGDLLKTCSC  CLKASYIW  LHYQDIKGRIS L KSQKD SILAQK SKEKET HD G SS SKLE
Subjt:  --SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKLE

Query:  FDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        FD+CGQW+SLFRHMEDMFA EGSQ       L +LREE KMNLEMLNGMPME
Subjt:  FDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

A0A6J1GE57 uncharacterized protein LOC111453172

4.7e-86

55.24

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS
        M E  IDDV  HN  AL   TNRPLKRKLSSI S SG K+RD CGK V+GKD +S+ PKH      EY        C + C  + L RF  + LES C+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------
        AS              VQ +L NDEAH  Q+D+ RI D EAL   C P S +PTCPEDD +DCP  +  N   E  +                       
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------

Query:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL
           SRLP  EGSKS  LE  S   TD+CANL +Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEK+TYHD G SS SKL
Subjt:  ---SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSKL

Query:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        EFD+CGQWMSLFRHMEDMFA EGSQ       L +LRE+ KMNLEMLNGMP+E
Subjt:  EFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

A0A6J1IQB8 uncharacterized protein LOC111478471

4.4e-84

54.8

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Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS
        M E  IDDV  +N  AL   TNRPLKRKLSSI S SG K+RD CGK+V+GKD +S+ PKH      EY        C + C  + L RF  + LES C+ 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH------EY--------CNQLCNKVALPRFG-KGLESDCAS

Query:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------
        AS              VQ +L N EAH   +D+ RI D EAL   C P S VPTCPEDD +DCP  +  N  +E                          
Subjt:  AS-------------PVQRDLLNDEAHFMQDDKQRIIDCEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVL-----------------------

Query:  ----SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK
            SRLP   GSKS  LE  S   TD+CANL +Y DLLKTCSC  CLKASYIW  LHYQDIKGRISAL KSQKD SILAQK SKEKETYHD G SS SK
Subjt:  ----SRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKETYHDHGKSSGSK

Query:  LEFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME
        LEFD+CGQWMSLFRHMEDMFA EGSQ       L +LRE+ KMNLEMLNGMPME
Subjt:  LEFDVCGQWMSLFRHMEDMFAPEGSQ-------LVNLREERKMNLEMLNGMPME

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G10110.1 unknown protein

8.9e-21

29.54

Show/hide

Query:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--EYCNQLCNKVALPRFGKGLESDCASASPVQRDLLNDEA
        M E     V     P L+  TN P KR +SSI         D  GK+V  +    KF K      + L  + A P     ++  C+       D ++ E 
Subjt:  MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKH--EYCNQLCNKVALPRFGKGLESDCASASPVQRDLLNDEA

Query:  HFMQDDKQRIIDCEALE--------------DSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVLSR--------LPTYEGSKSATLEWWSRVMTDHCAN
        +     +    DC+AL+              D    ++A     + D+    E +  +++  +  SR        L   +  +S  +   S V      N
Subjt:  HFMQDDKQRIIDCEALE--------------DSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVLSR--------LPTYEGSKSATLEWWSRVMTDHCAN

Query:  LDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKET-YHDHGKSSGSKLEFDVCGQWMSLFRHMEDMFAPEGSQLVN-
        L+   DLL++C C  CL ASYIW  L+YQD KGR+SA+ KSQK  S L Q   KE+ T +H  G S  +K E  +  QW SLF  M D+ + E S L N 
Subjt:  LDIYGDLLKTCSC-LCLKASYIWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKET-YHDHGKSSGSKLEFDVCGQWMSLFRHMEDMFAPEGSQLVN-

Query:  ------LREERKMNLEMLNGMPMEN
              LR++ KM+LE     P ++
Subjt:  ------LREERKMNLEMLNGMPMEN

AT5G65120.1 unknown protein

9.2e-18

29.93

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Query:  ALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDS-KFPKHEYCNQLCNKVALPRFGKGLESDCASASPVQRDLLNDEAHFMQDDKQR---IIDC
        AL   TN P KR LS+I      KS D  GKS+  ++G   KF K   C  + + V             +S   +  D  ++     +   +     ID 
Subjt:  ALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDS-KFPKHEYCNQLCNKVALPRFGKGLESDCASASPVQRDLLNDEAHFMQDDKQR---IIDC

Query:  EALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVLSRLPTYEGSKSATL-----EWWSRVMTDHCANLDIYGDL---------LKTCSC-LCLKASY
        E  +D     +   TC +D   +        V  E++   L +   ++S  L     +       + C+N+D  G +         LK+CSC  CL A+Y
Subjt:  EALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVLSRLPTYEGSKSATL-----EWWSRVMTDHCANLDIYGDL---------LKTCSC-LCLKASY

Query:  IWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKET-YHDHGKSSGSKLEFDVCGQWMSLFRHMEDMFAPEGSQLVN-------LREERKMNLEMLNGM
        IW  LHYQDIKGR+S L KSQK+ S L Q+  +   T  +    S+ S    +   QW SLFR+ME + A E + L N       LRE  K++LE     
Subjt:  IWLGLHYQDIKGRISALMKSQKDTSILAQKYSKEKET-YHDHGKSSGSKLEFDVCGQWMSLFRHMEDMFAPEGSQLVN-------LREERKMNLEMLNGM

Query:  PMEN
          +N
Subjt:  PMEN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTGAACACATCATTGATGATGTGTTACGCCACAATGGTCCCGCTCTTGCAACCTTCACCAATCGCCCGCTTAAGCGAAAGCTTTCGTCAATTTCGAGCGGTTCGGG
AGCTAAATCTAGGGATTGTTGTGGAAAATCTGTGGAAGGGAAGGATGGAGATTCCAAATTCCCCAAGCATGAGTATTGTAATCAACTCTGTAACAAAGTGGCTCTTCCTA
GGTTTGGTAAGGGGCTGGAATCGGATTGCGCGTCTGCTTCGCCCGTGCAGCGTGATTTGTTGAATGATGAAGCACATTTTATGCAAGATGATAAACAAAGGATTATAGAT
TGTGAAGCTTTAGAAGATTCTTGCTTTCCCATTTCTGCAGTGCCTACTTGTCCTGAGGATGACTTGAAAGATTGCCCAGAAATTGTGCAATACAATGTTGTCGATGAAGA
AGTATTGTCGAGGTTACCTACATATGAGGGTTCCAAGTCTGCGACACTGGAATGGTGGTCAAGGGTTATGACTGATCATTGTGCTAATTTAGACATTTATGGAGACTTGC
TTAAAACATGTTCATGTTTGTGCTTGAAAGCATCATACATTTGGTTGGGCCTCCATTACCAGGACATTAAAGGACGGATTTCAGCACTTATGAAAAGCCAGAAAGATACA
AGCATTTTGGCTCAGAAATACAGCAAAGAGAAAGAGACTTATCATGATCATGGAAAATCTTCTGGATCAAAGCTAGAATTTGATGTTTGTGGTCAGTGGATGTCACTATT
CCGTCATATGGAAGATATGTTTGCTCCAGAAGGCAGCCAACTTGTAAATCTGAGGGAGGAACGCAAGATGAATTTGGAGATGCTCAATGGCATGCCTATGGAGAACCAAT
AG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPEHIIDDVLRHNGPALATFTNRPLKRKLSSISSGSGAKSRDCCGKSVEGKDGDSKFPKHEYCNQLCNKVALPRFGKGLESDCASASPVQRDLLNDEAHFMQDDKQRIID
CEALEDSCFPISAVPTCPEDDLKDCPEIVQYNVVDEEVLSRLPTYEGSKSATLEWWSRVMTDHCANLDIYGDLLKTCSCLCLKASYIWLGLHYQDIKGRISALMKSQKDT
SILAQKYSKEKETYHDHGKSSGSKLEFDVCGQWMSLFRHMEDMFAPEGSQLVNLREERKMNLEMLNGMPMENQ

Sed0017418 (gene) of Chayote v1 genome