| GenBank top hits | e value | %identity | Alignment |
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| BBG99318.1 transposable element gene [Prunus dulcis] | 6.0e-31 | 44.9 | Show/hide |
Query: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPV---FVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWL
NK WH RLGHP VF+QV+ + +P F + C C G S+ F S S T PLEL+HSDVWGP+P +S++G+KYYV +DDF+++ W+
Subjt: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPV---FVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWL
Query: FPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
+P+ YKSDV F + +ENLLD K+K RSD GGE+++ + + F
Subjt: FPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| KAF8394586.1 hypothetical protein HHK36_020800 [Tetracentron sinense] | 1.4e-32 | 44.3 | Show/hide |
Query: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQI-PVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFT
A+T + VSS++WH RLGHP +QV ++ + H C C G SR F S+S + PLEL+H+DVWGP+ SING K+YV+ IDDFSR+
Subjt: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQI-PVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFT
Query: WLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
W+FP+ +KS V + F S++E + DRK+K ++DGGGEY++ F
Subjt: WLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| PKU80502.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 9.3e-32 | 44.3 | Show/hide |
Query: AYTGNKVSSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFT
A + +SS +WH RLGHP V K + N ++ + ++ C CL + F S + TH PLEL+HSDVWGP+P S G +YY+ L+DD+SRF
Subjt: AYTGNKVSSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFT
Query: WLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
WLFP+ KSDV +T F++ IE +RK+K R+DGGGE+VN ++F
Subjt: WLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| PKU87026.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 2.7e-31 | 48.23 | Show/hide |
Query: SNIWHDRLGHPCDVVFKQVVK-NLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICYK
SNIWH RLGHP + + K N + + V C C A + +F S + ++ LELIHSDVWGP+P S +YYV +DDFSRFTWLFP+ +K
Subjt: SNIWHDRLGHPCDVVFKQVVK-NLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICYK
Query: SDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
S+V++ I+F + IENL K+KC R+DGG EYVNH L+ F
Subjt: SDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| TQE01220.1 hypothetical protein C1H46_013127 [Malus baccata] | 7.6e-34 | 40.67 | Show/hide |
Query: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSKH--CPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRF
AY G V S+IWH RLGHP + + +++N IPV + S+H C C+ G +SR FP + E +H+D+WGP+P S+ GH+YYV+++D+++R+
Subjt: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSKH--CPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRF
Query: TWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
W+FP+C KSDV ++F + + N +K +SDGGGEY +H+ + F
Subjt: TWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9E5R8 Integrase catalytic domain-containing protein | 6.7e-36 | 50.7 | Show/hide |
Query: SSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
SS +WH RLGHP +V + V+ K+L +PV ++ C HCLAG + + FP S S T PLE++HSDVWGPAP S NG +YYV+ +D+F+RFTW FP+ +
Subjt: SSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
Query: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
K V S+ +HF S +ENLL K+K R+D GGEY H ++F
Subjt: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| A0A2N9G7E3 Integrase catalytic domain-containing protein | 6.7e-36 | 51.63 | Show/hide |
Query: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQI-PVFVHSKH--CPHCLAGTISRQIFPTSNSSTHV--PLELIHSDVWGPAPENSINGHKYYVSLIDDF
AYT KVSS+ WH RLGHP + + V K+L P+ S + C HC G +S+ P S+S TH PL+L+HSDVWGPAP SING +YYVS IDDF
Subjt: AYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQI-PVFVHSKH--CPHCLAGTISRQIFPTSNSSTHV--PLELIHSDVWGPAPENSINGHKYYVSLIDDF
Query: SRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
S+FTW FP+ +KS V ST +HF S +ENLL+ K+K R+D GGEY + + +
Subjt: SRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| A0A2N9GWG5 Uncharacterized protein | 7.4e-35 | 51.41 | Show/hide |
Query: SSNIWHDRLGHPCDVVFKQVVKN-LQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
SS +WH+RLGHP V K V++N L++PV + C HCL G + + FP S S T PLE++HSDVWGPAP S N +YYV+ +DDF+RFTW FP+
Subjt: SSNIWHDRLGHPCDVVFKQVVKN-LQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
Query: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
KS V S+ +HF S +ENLL K+K R+D GGEY H ++F
Subjt: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| A0A2N9HBZ5 Uncharacterized protein | 2.3e-36 | 50.7 | Show/hide |
Query: SSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
SS +WH RLGHP +V + V+ K+L +PV ++ C HCLAG + + FP S S T PLE++HSDVWGPAP S+NG +YYV+ +D+F+RFTW FP+ +
Subjt: SSNIWHDRLGHPCDVVFKQVV-KNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
Query: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
K V S+ +HF S +ENLL K+K R+D GGEY H ++F
Subjt: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| A0A2N9HKM9 Uncharacterized protein | 7.4e-35 | 51.41 | Show/hide |
Query: SSNIWHDRLGHPCDVVFKQVVKN-LQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
SS +WH+RLGHP V K V++N L++PV + C HCL G + + FP S S T PLE++HSDVWGPAP S N +YYV+ +DDF+RFTW FP+
Subjt: SSNIWHDRLGHPCDVVFKQVVKN-LQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLFPICY
Query: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
KS V S+ +HF S +ENLL K+K R+D GGEY H ++F
Subjt: KSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.2e-15 | 29.76 | Show/hide |
Query: MNLQAYTGNKVSSN---IWHDRLGHPCDVVFKQV-----------VKNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHV--PLELIHSDVWGPAPEN
+N QAY+ N N +WH+R GH D ++ + NL++ + C CL G +R F TH+ PL ++HSDV GP
Subjt: MNLQAYTGNKVSSN---IWHDRLGHPCDVVFKQV-----------VKNLQIPVFVHSKHCPHCLAGTISRQIFPTSNSSTHV--PLELIHSDVWGPAPEN
Query: SINGHKYYVSLIDDFSRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
+++ Y+V +D F+ + + I YKSDV S F++ E + KV D G EY+++ + F
Subjt: SINGHKYYVSLIDDFSRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.5e-19 | 34.25 | Show/hide |
Query: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHS--KHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLF
+++S ++WH R+GH + + + K I + K C +CL G R F TS+ L+L++SDV GP S+ G+KY+V+ IDD SR W++
Subjt: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHS--KHCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWLF
Query: PICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
+ K V F +++E RK+K RSD GGEY + E +
Subjt: PICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETF
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 7.2e-11 | 24.54 | Show/hide |
Query: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK------------HCPHCLAGTISRQIFPTSN----SSTHVPLELIHSDVWGPAPENSINGHKYY
NK + H LGH F+ + K+L+ + K CP CL G ++ + ++ P + +H+D++GP + Y+
Subjt: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK------------HCPHCLAGTISRQIFPTSN----SSTHVPLELIHSDVWGPAPENSINGHKYY
Query: VSLIDDFSRFTWLFPICYKSDVS--STVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETFF
+S D+ +RF W++P+ + + S + ++ I+N + +V + D G EY N TL FF
Subjt: VSLIDDFSRFTWLFPICYKSDVS--STVIHFISMIENLLDRKVKCFRSDGGGEYVNHTLETFF
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.7e-23 | 36.49 | Show/hide |
Query: MNLQAYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK---HCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLID
++L A +K + + WH RLGHP + V+ N + V S C CL ++ F S ++ PLE I+SDVW +P S + ++YYV +D
Subjt: MNLQAYTGNKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK---HCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLID
Query: DFSRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYV
F+R+TWL+P+ KS V T I F +++EN ++ F SD GGE+V
Subjt: DFSRFTWLFPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-23 | 37.86 | Show/hide |
Query: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK---HCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWL
+K + + WH RLGHP + V+ N +PV S C C + F S ++ PLE I+SDVW +P SI+ ++YYV +D F+R+TWL
Subjt: NKVSSNIWHDRLGHPCDVVFKQVVKNLQIPVFVHSK---HCPHCLAGTISRQIFPTSNSSTHVPLELIHSDVWGPAPENSINGHKYYVSLIDDFSRFTWL
Query: FPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYV
+P+ KS V T I F S++EN ++ SD GGE+V
Subjt: FPICYKSDVSSTVIHFISMIENLLDRKVKCFRSDGGGEYV
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