CuGenDBv2

Gene ID	Sed0017440
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain-containing protein
Genome location	LG07:13674173..13675137
RNA-Seq Expression	Sed0017440
Synteny	Sed0017440
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577202.1 hypothetical protein SDJN03_24776, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-68

67.7

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR
        MGNCLF   +GEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+ DLFWNPLP + EL PG SYYLL            EGEMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR

Query:  SNSVPAA--------APYRMSFDNHGGGVLRRSQTE------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFS
        SNSVP A        APYRMSFD    GVLRRSQTE            +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFS
Subjt:  SNSVPAA--------APYRMSFDNHGGGVLRRSQTE------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFS

Query:  DHWSLSATTAVSTSSVSSKSGAFFEI
        DHWSLS+TTA +T S SSKSG   EI
Subjt:  DHWSLSATTAVSTSSVSSKSGAFFEI

XP_004146558.1 uncharacterized protein LOC101218947 [Cucumis sativus]

9.2e-69

68.3

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTEG----------EMGIIRPREGHVR
        MGNCLF   AGEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP             EMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTEG----------EMGIIRPREGHVR

Query:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP       A APYRMSFD    GVLRRSQTE           +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD 
Subjt:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS  TA +T SVSSKSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

XP_022985129.1 uncharacterized protein LOC111483212 [Cucurbita maxima]

1.6e-68

67.41

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR
        MGNCLF   +GEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLL            EGEMG+IR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR

Query:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP A       A YRMSFD    GVLRRSQTE           +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSDH
Subjt:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS+TTA +T S S+KSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

XP_023552343.1 uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]

4.9e-70

68.44

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR
        MGNCLF   +GEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLL            EGEMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR

Query:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSD
        SNSVP A       APYRMSFD    GVLRRSQTE            +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD
Subjt:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSD

Query:  HWSLSATTAVSTSSVSSKSGAFFEI
        HWSLS+TTA +T S SSKSG   EI
Subjt:  HWSLSATTAVSTSSVSSKSGAFFEI

XP_038902281.1 uncharacterized protein LOC120088913 [Benincasa hispida]

3.7e-70

69.06

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLP----------TEGEMGIIRPREGHVR
        MGNCLF   +GEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP           EGEMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLP----------TEGEMGIIRPREGHVR

Query:  SNSVP------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDHW
        SNSVP      A APYRMSFD    GVLRRSQTE           +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD W
Subjt:  SNSVP------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDHW

Query:  SLSATTAVSTSSVSSKSGAFFEI
        SLS TTA +T S SSKSG   EI
Subjt:  SLSATTAVSTSSVSSKSGAFFEI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUU6 Uncharacterized protein

4.5e-69

68.3

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTEG----------EMGIIRPREGHVR
        MGNCLF   AGEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP             EMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTEG----------EMGIIRPREGHVR

Query:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP       A APYRMSFD    GVLRRSQTE           +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD 
Subjt:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS  TA +T SVSSKSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

A0A1S3BSZ8 uncharacterized protein LOC103493172

9.9e-69

67.86

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR
        MGNCLF   AGEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP             EMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR

Query:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP       A APYRMSFD    GVLRRSQTE           +W+VKLVISP+RL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD 
Subjt:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS  TA +T SVSSKSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

A0A5A7TPJ8 DUF4228 domain-containing protein

9.9e-69

67.86

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR
        MGNCLF   AGEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP             EMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR

Query:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP       A APYRMSFD    GVLRRSQTE           +W+VKLVISP+RL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD 
Subjt:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS  TA +T SVSSKSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

A0A5D3D1S5 DUF4228 domain-containing protein

9.9e-69

67.86

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR
        MGNCLF   AGEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLLP             EMGIIR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTE----------GEMGIIRPREGHVR

Query:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP       A APYRMSFD    GVLRRSQTE           +W+VKLVISP+RL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSD 
Subjt:  SNSVP-------AAAPYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS  TA +T SVSSKSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

A0A6J1JCF7 uncharacterized protein LOC111483212

7.6e-69

67.41

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Query:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR
        MGNCLF   +GEI GK+KVITSNGGIMEL SPIT GCIA EFPGYGIFK+HDLFWNPLP + EL PG SYYLL            EGEMG+IR REGHVR
Subjt:  MGNCLF---AGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLL----------PTEGEMGIIRPREGHVR

Query:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH
        SNSVP A       A YRMSFD    GVLRRSQTE           +W+VKLVISPKRL EILEEE  T+EL+ESVRTVAKCGS  TSS+FSS+MAFSDH
Subjt:  SNSVPAA-------APYRMSFDNHGGGVLRRSQTE-----------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDH

Query:  WSLSATTAVSTSSVSSKSGAFFEI
        WSLS+TTA +T S S+KSG   EI
Subjt:  WSLSATTAVSTSSVSSKSGAFFEI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64700.1 unknown protein

1.9e-27

41.12

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Query:  MGNCLFAG----EIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLP--TEGEMGIIRPREGHVRSN--SVP
        MGNCLF G    E    +KVI S+GG++E  SP+TAG ++  F G+ +F   DL W PL  DH L PG SYYL P     E+        HVRSN  S+ 
Subjt:  MGNCLFAG----EIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLP--TEGEMGIIRPREGHVRSN--SVP

Query:  AAAPYRMSFD-NHGGGVLRRSQTE---------------------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFS
        A  PYRMS D NH   VL+RS T+                           IW+V L+I+ + L +IL E+ RT EL+ESVR VAK  ++  +S+ S
Subjt:  AAAPYRMSFD-NHGGGVLRRSQTE---------------------------IWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFS

AT3G61920.1 unknown protein

7.4e-24

40.41

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Query:  MGNCLFAG-----EIHGK----VKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWN--PLPEDHELQPGTSYYLLPTEGEMGIIRPREGHVRSN
        MGNC+F G     +++ K    +KV+T NGG+MEL  PI A  I  EFPG+ I  +  L  +  PL    EL PG  YYLLP           +     +
Subjt:  MGNCLFAG-----EIHGK----VKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWN--PLPEDHELQPGTSYYLLPTEGEMGIIRPREGHVRSN

Query:  SVPAAAPYRMSFDN-------HGGGVLRRSQTEIWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDHWSLSAT
        S   + PYRMSF          GGG        +W+V+LVISP++LAEIL E+  T+ L+ESVRTVAKCG  G      S  A SD  S++++
Subjt:  SVPAAAPYRMSFDN-------HGGGVLRRSQTEIWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDHWSLSAT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAACTGCTTGTTCGCCGGAGAGATCCACGGCAAAGTCAAGGTAATCACGTCCAACGGCGGGATCATGGAGCTGGCGTCTCCCATCACCGCCGGGTGCATCGCCGG
CGAGTTTCCCGGCTACGGAATCTTCAAAACCCACGATCTGTTCTGGAACCCACTGCCGGAGGACCACGAGCTTCAGCCGGGGACATCCTACTACCTGCTTCCGACCGAGG
GGGAGATGGGGATCATAAGGCCGCGTGAGGGGCACGTGCGCTCCAACAGCGTGCCGGCGGCGGCGCCCTACAGGATGTCGTTCGATAACCACGGCGGCGGAGTCTTGAGA
CGCTCGCAAACGGAGATTTGGAGGGTGAAGCTGGTGATTAGTCCGAAGCGGCTGGCGGAGATTTTGGAGGAGGAAGCTCGGACCAAGGAGTTGATGGAGAGTGTTCGGAC
GGTGGCCAAATGTGGGAGCGCCGGTACCTCTAGCACCTTCTCGTCGGCGATGGCGTTTTCCGATCACTGGAGCTTGTCGGCCACCACCGCCGTTTCTACTTCTAGTGTTT
CTTCTAAAAGTGGCGCCTTTTTCGAGATTTAA

mRNA sequence

Show/hide mRNA sequence

CAAGAACACAGCAGCAGCAATCCAGCCATCGCTTACTTCTTCTTCTCTTCTTCCTTCCTTTTTCTTTTCACCGACAACCCTTTTCCCAAATCTTCTCCATTTTATAACCC
AAAAAGCCATTCATTCAATCCAACACAACACGCCAACAAACAGAGCTCCTCTGTTTTCTTTTTTAATGGGAAACTGCTTGTTCGCCGGAGAGATCCACGGCAAAGTCAAG
GTAATCACGTCCAACGGCGGGATCATGGAGCTGGCGTCTCCCATCACCGCCGGGTGCATCGCCGGCGAGTTTCCCGGCTACGGAATCTTCAAAACCCACGATCTGTTCTG
GAACCCACTGCCGGAGGACCACGAGCTTCAGCCGGGGACATCCTACTACCTGCTTCCGACCGAGGGGGAGATGGGGATCATAAGGCCGCGTGAGGGGCACGTGCGCTCCA
ACAGCGTGCCGGCGGCGGCGCCCTACAGGATGTCGTTCGATAACCACGGCGGCGGAGTCTTGAGACGCTCGCAAACGGAGATTTGGAGGGTGAAGCTGGTGATTAGTCCG
AAGCGGCTGGCGGAGATTTTGGAGGAGGAAGCTCGGACCAAGGAGTTGATGGAGAGTGTTCGGACGGTGGCCAAATGTGGGAGCGCCGGTACCTCTAGCACCTTCTCGTC
GGCGATGGCGTTTTCCGATCACTGGAGCTTGTCGGCCACCACCGCCGTTTCTACTTCTAGTGTTTCTTCTAAAAGTGGCGCCTTTTTCGAGATTTAACTGTACATTGGTT
TGCTTTTTTTTTTTTTTTTTTTATTGGTTTCTGTTTTATTTAGTTTGTGATTTTGTTGTAATAGCTTTCCATCCTTTGTTTGAACTGAGGATAGGAAATTAAAGATGGTG
ACTTCAAATGGGTGTATTCATTGCAGCTTTTTTTGCAATCAATTATTGAATAGAGTAAAGGCTATATATATATATGCACAAGGAG

Protein sequence

Show/hide protein sequence

MGNCLFAGEIHGKVKVITSNGGIMELASPITAGCIAGEFPGYGIFKTHDLFWNPLPEDHELQPGTSYYLLPTEGEMGIIRPREGHVRSNSVPAAAPYRMSFDNHGGGVLR
RSQTEIWRVKLVISPKRLAEILEEEARTKELMESVRTVAKCGSAGTSSTFSSAMAFSDHWSLSATTAVSTSSVSSKSGAFFEI

Sed0017440 (gene) of Chayote v1 genome